Llat020083.1
Basic Information
- Insect
- Leucozona laternaria
- Gene Symbol
- -
- Assembly
- GCA_932273905.1
- Location
- CAKNZR010000454.1:877309-879345[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-09 5e-06 27.4 0.0 1 37 15 50 15 54 0.89
Sequence Information
- Coding Sequence
- ATGCCACGGAAGCCAGTATTGCAGCGCAAGAAGGGAGTACACACTAAAGATCAGATGAGTGCAGCACTAAGAAGTATCGAGGGTGGAATGTCAATCCGAGGGGCTGCAAAAGAATTTGGTCTTTCATATCATACAGTTCGGCGATACTATTTAAAACTAAAGGATTGTCCAGCTTCAACTACTTTAACATCAACTTATAGCCATAGGCAGTTTTTTTCAGATCAGCAGGAAGATGCACTGAAATCCTATATAACCCACTGCGCAAATATATTTTATGGTATCACGGCCACCGAATGCCGCAAATTGGCTTTTCAACTTGCGTCAATAAATGATATGTCAAATATTCCACCAAGTTGGAAAATACACTCAATGGCTGGCTTGGATTGGCTGCGGGGCTTCCGGGGAAGGCaccctgagctgtcgcttaaaaaaccagaagcatgcagcttagcacgagccacatcttttaataagaattcagtgcaggtattttttgacaatttgttcaaagttcttcaaaggcatcccgagttttccgatgggacacgaattttcaacttggacgaaactgcgacaacaactgttcagaaaccacaaaaggtacttgcgccaaaaaatacaaaaaacttatccaaagtaacaagtggggagagaggtgtgttagtaacaacatgctgcattatcagtgctagtggcactgctttacctccaatcatagtgttcccacggaagaactttaaaagccatatgcttaatggagcaccaccaggatccttgggattggcttcaccctccggctggatgaactctgaactgtttttggaggtaatgaagcatttcgttaaacacacaaatagcagcaacactaacccgagcttactaattatggacaaccatgaatcgcacctagcaatagaagctcttaacttggcaaaacaatcaggcgttacaattcttacttttcatccacacacaacttctaagatgcagcctttagacgttggtgtgttcggccccttcaaaaaattttacaactgcgaaatggactcgtttatgcttcgtatgccaggacagccaataaccatctaccacctagccgaaataatcggaaaatcctttaacagagctatgacaccagtgaatattataagcgcatttaaaaaaacagggattttcccttttgatagaaacgtttttacagatgaatgttttctgccaagttctgtaactgaCCGTCCAGTTCCTTCAGCCTCGACCAATTTGGAAATAGCTCCCTTGGACCATCAAGAAATTGCAATTCCTGCTAGCTCAAATGCTGCTGACGAGTCAAACGCAACTACAACTTCTATTGAAAATACAACAGATCAGCAACTTCCACAAATTATCGAAAGAGAACCCCAACCCCATTGCAGCAAAGCTAAACCTTTCTTGAGTCCCTTTAATTTTAGACAGCCAATTAAAGCGGGTCCCCGTAAGAACACTAGGAAACGTACCGCTGGTCGCAGCTTAATTGCCACCGATACTCCCGAAAAAAATGAATTAGCTGCAAAAAAACAAGTCAATAAAGGTAAGACAATGAAAAATGTATGCAAGCGTAAAGTTCTTCAAGACAGTGACAGTGACACTGATACTGCACTCCACTTGGATGATTCAGACGGCAATGTATCTGATCAAGAAGACACCCTCATAAATTCATCAGTTACTTTAAATTATAAGATTTTCGAACGTCCTTTAAATGAATCTCCATCACTAAATAATTTTGATTTAGTGAAATTTAAAGCAAAAAAATTGGTAGTTTGCTATGTTGGAAAAATGTTGGAACCCAAAAACAACAATAATGAGTGGTTTGTTTCATTTTTGCGACTCAAATCGAAAACAAATGAGCTTTTTTGTATGCCACTAGTCCCCGATTTCGCTTTAGTCAAAGAAGAGGATATTAAATACGTTTTGAACGATCCTACAGTATTGGGGCCAACTAAAAGGCAGCAATCTTTATATAAATTTACTGAATGTCTAGGTAAACTTAATATTCGTTAA
- Protein Sequence
- MPRKPVLQRKKGVHTKDQMSAALRSIEGGMSIRGAAKEFGLSYHTVRRYYLKLKDCPASTTLTSTYSHRQFFSDQQEDALKSYITHCANIFYGITATECRKLAFQLASINDMSNIPPSWKIHSMAGLDWLRGFRGRHPELSLKKPEACSLARATSFNKNSVQVFFDNLFKVLQRHPEFSDGTRIFNLDETATTTVQKPQKVLAPKNTKNLSKVTSGERGVLVTTCCIISASGTALPPIIVFPRKNFKSHMLNGAPPGSLGLASPSGWMNSELFLEVMKHFVKHTNSSNTNPSLLIMDNHESHLAIEALNLAKQSGVTILTFHPHTTSKMQPLDVGVFGPFKKFYNCEMDSFMLRMPGQPITIYHLAEIIGKSFNRAMTPVNIISAFKKTGIFPFDRNVFTDECFLPSSVTDRPVPSASTNLEIAPLDHQEIAIPASSNAADESNATTTSIENTTDQQLPQIIEREPQPHCSKAKPFLSPFNFRQPIKAGPRKNTRKRTAGRSLIATDTPEKNELAAKKQVNKGKTMKNVCKRKVLQDSDSDTDTALHLDDSDGNVSDQEDTLINSSVTLNYKIFERPLNESPSLNNFDLVKFKAKKLVVCYVGKMLEPKNNNNEWFVSFLRLKSKTNELFCMPLVPDFALVKEEDIKYVLNDPTVLGPTKRQQSLYKFTECLGKLNIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00694542;
- 90% Identity
- iTF_00663989;
- 80% Identity
- -