Llat030039.1
Basic Information
- Insect
- Leucozona laternaria
- Gene Symbol
- -
- Assembly
- GCA_932273905.1
- Location
- CAKNZR010000783.1:439569-439889[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-10 4.4e-07 30.8 0.0 2 39 13 50 12 53 0.94 2 2 3.3 3.2e+03 -0.7 0.0 8 18 64 76 62 78 0.68
Sequence Information
- Coding Sequence
- ATGTCGGTGGAACGTTTTTCTTTTGGGAAAACTCCACCCAATGCAATGCAAAAAGCGGTGGATATGGTAGTGAAAGATGGAATTTCATTGCGAAAAGCAGCTACAAATACTGGTGTGGCATTCCAAACTCTTTCGAGGTATGTACAAACTTTCAAAGCATCTCCGTCTGCAAGGTTGTACCAAAACTACGCAGTGAACGCTGTGTTTAGTAAGGAAGAAGAACTATCTCTAACGTCCTATATAAAAAAACTGCTCCACTATGTTCTATGGATTGACGTTGCTAGATGTAGGGCGTTTGGCTTATCAGACCGCAGTTGCTAA
- Protein Sequence
- MSVERFSFGKTPPNAMQKAVDMVVKDGISLRKAATNTGVAFQTLSRYVQTFKASPSARLYQNYAVNAVFSKEEELSLTSYIKKLLHYVLWIDVARCRAFGLSDRSC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -