Basic Information

Gene Symbol
osa
Assembly
GCA_932273905.1
Location
CAKNZR010000105.1:21540-40216[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-08 0.00018 23.1 0.0 48 89 80 118 72 118 0.91

Sequence Information

Coding Sequence
ATGTCAAACAGCCCAGCCGCACTTAACTCTTATGCAATCAGTTCTAAACTTGTAAGTGAGTTTGCGGGCAGGTTAACGAAATGGGACAAGAATTTAATAACACTTCATTGGGTACCAGACCACGTTTTTGTCGAAGAGGCAGACGCCAGAAATAAGAGCTACGACAACTCTAACGGGACCACAGCCGATATGGGAGCAAACTTGATTAAGATCAAAATCCAAATAGACAGAGCTATCGAAgttaccaaaagtaaaacatggaaagatattgccgggcttctgggaatcggagcgagtagtagcgcagcatataccctgcgaaaacactacaccaaaaatctgctggcattcgaatgtcatttcgatcgcggagacattgatccattgccaataatacaacaggtcgaggctggctccaaaaagaaatctgccaaagctgcatcagttccatcaccagCTggctcatcgaattcccaggactcgttcccggcaccggtggcggcgaacacaactattgatagttatccgggttacccgagcggttatccttctggagcgcagcccgactacaatgcaggtgctcaaatccaaaggccaccgtcacaaactaacgcacaaacccctcatgcagGAAATACTCAAGCAACAGCTGGTGATAATATTAGTGTCAGCAATCCTTTTGATGACCCGGTAGGTGCACAGCCTCGTGCCCCTTATCAACAGGGTAGTACATATCCTCCGGTGTCTAGATCGCAAGgcggcccatatccaggtcaaccaggctataaccaatacggatcgagtgaacaatacaattcttcagtgccggccggacaatttactcaaggccaaggccagtttccaccacaaaatcgtaccatgtatcctccctatggtccggagggagaagcTTCCTCACCGGCAGCAAATACGTACCCCTATGCAAGCCGGCCTTATAACCAACCACCTCCAGGAGCTACACAAACAGTACCTCCACCTGGCGGTAGTACGACAACGCCCACAGGACCGCCAACTGGAGCTGGGGCATCTCCCAGTACATATCCTCCTGCAGCTCCACAACAGCCCGATTATTATCGAGCTCCTCCTGAGCAGagtccgcagccaaggagacatccagattttgtaaaagattctcagggctatgctggttacaatcagagaccgcaaatgtatggtggttggcaaggtggtgctggccagtaccgtggccaataccctccctcacctacgccacaagcatggtgtaattccccgcgtgcttctggaccaccgccgccgcccaatcagcaggcagcggctcagtgggatcaacaccgctaccccacacagtctcaacctccttacccagctaatcagcagcagccGTGGACAAACATGAATTCCCCACAACAGAATCCCGGTTCCCCACTTCGGCCACCGCCGCAACGACTGCCCGGCAGTGGTTCAGTTGTTGGACTTTCAACAACGGTGGCCATCAGTGCAGGAGGCAAACCACCATTCAACATGCCACCACCTCAACCCAGTGGTAGTAGTGGAGTTCCACCACCTGGGCCACCTGGATCGGTGGGTCCACAGCCAGGTGTTGTTGTAAGCGGTCCATCGATCCCACCTGGACCTAATGTGATGCCAGGCGGTAGCAAAGCGACGCCTCCACCACCACAGCCGGGCCCATTTCCGCCCACAGCCCAAATGCAAaagaaagacattgtttttccaccagatagcgtggagtcgacaaccccagtcttatatcgacgaaaacgtttggttaaaagcgatgtttgccccattgatccatggcggatattcatgtccctccaatcgggtctgctttcggaaagcacatgggcgctagatatactcaacattctgctgtacgacgactccacaatccagtacttcggcttgacacatctgcctggattgcttagtcttctgttagagcatttccaaaagaacctcgccgaaatgttcgaaaatgagaacaaTGCCTGCGTCACCAGTATCTGTAGCCGGAGCAGGGCGCGGCACTATGAAAACAACGCTGATAAAGACTGCAATTATAACGTGGATTTAGGTCAACTAATGGCGCCCACAAACACTGACGAAAAGGtactgctcctatcgaacaccccaaactacacaatggtctcacgaaagaacatgcccgtccggatacaaaatgccgaagatgatatattcgtgtcggatcagctcaaaccttgggactttgactcaaacaaaaaataccagcttacagtaccaattggcagcgatgcctggacatacgatcacattgaacgtgatccacacgataacgttatcgacgtttttaagtctgagatcattgacattccatttgcacgATACATTGGTGGCAGACGGAGTAGAAAAGACAAATCCGTCAGATTGTTCCATGATTATTTGGATCGAGACGAAGTCGGTGTTGGAGGAGATGATGAAGAGGACAGCAACAACAAAGTACTTGCGTTCAACAAAAAACGAAGACACATTAGTATTTCGAGCAACACGAGCAGTAATAACAATAAGAATGGACTAACTAATTTGGTCGGATCTGCTAAAAAATGTAAAATGAATTTCCTAGAAGCAAGTGGCGGCGACGGTTCATCACCGCATGCCATTTCCATTAAGGCGGAGGTGAAAAAAGAGGAAACAGAGGACGTTGTTGTTGGTGCTGATAGTTTGGTCTGTGAACGAAGTAGTGATAATTTGATCAAACCAAAGGATCTTCTTgacagtgactgtagagaagtagacatggacattgaacaccctcgcgtgcttctgaatggcgcgcctccgccttccaaaggatccgatttcgatccaaagtcaagcgtccgagatccagcatcagtgcttcaacgtcgtcgcatgtctggctatgaggacgagtgctatacccgcgacgaagctagtctctacttggttaacgagagtcaggattcactggctcgtcgttgcatatgcctatcgaatatattccgcaatttgacgtttgttcctggaaacgagacgattctggcgaaatcctcgaaattccttgctctcctcggaaagttgcttttactaaaccatgagcacctcctgagaacaccaaaaacccgtaactacgatcgggaggaggatactgatttctctgattcatgtagttcgttgcatggagaaaaagaatggtggtgggattatttgatcacgatccgggagaatatgctcgtagcagtggccaatattgctggtcatctggaattgtcccgttacgaagagattataacgaggcctgtactcgatggactattgcaTTGGGCCGTCTGTCCATCAGCGCATGGGCAAGATCCATTCCCATCATGTGGATCCAATTCTGCACTGTCGCCACAGCGCTTGGCACTAGAAGCGCTGTGTAAGTTGTGTGTAACTGATGCGAACGTTGATTTGGTGATTGCCACCCCACCACATTCGCGACTCGAAAAGCTATGCGCTGTTCTTACACGACACCTTTGCCGCAACGAGGATCAAGTGCTAAGGGAGTTTTCAGTAAACTTGTTGCATTACCTCGCGGCAGCCGACAGTTCAATGGCGCGTTCGGTGGCATTGCAATCGCCGTGTATATCATACTTAGTTGCATTTATCGAGCAAGCCGAACAGACTGCCATCGGAGTGGCAAATCAGCACGGCATTAATTACCTCCGTGAAAATCCAGATTCGATGGGAACGAGTTTAGATATGCTCAGACGAGCAGCTGGAACTTTGCTCCATCTCTCTCGACATCCAGACAATCGGTCGTTGTTCATGCAGCAGGAACCTCGTCTATTGGGCTTAGTTATGAGTCATATACTAGATCAGCAGGTTGCTCTCATCATTTCGCGAGTGCTATTTCAGGTCTCACGTGGTCCTGGCCCCATGCCGTCTATGGAATATCGATTGCAGCAACGTCAGCAGCTTCATCAGCAACAACAAGACAACATAAAATCTAATGAGAATAGAAAATTGATGCAGCAACAGAATGCACAACAACAATTACCAGCAATAGTTGTCGATGAAGTGGGTTGTACCACTGCCGGTGGTGATTTAAGTACAAATGCAAATGTCGCTTCTACGGCAACAGTCATAGCAGTAACAAATTTCTCATCTTCTAATGTTCATAGTAGTAACAGCAACAGCAGCAGCAGCTGTTACAGCAATTCTAGCCTAACTTGTAATAAATCTGAAGAAATCCTAGTACCACCGTCGGCAACACTTAACGATATAAGTAATAGCAGCAACAGCAGTTGTGGCAGCAGCAACAGTGGCAGTAACATAACTGCTCCCATCGGTGCCACTATTGCCCCATCAATAGCGTCACCATCGTCATCATCTTCAACAGCCTCTTCATCGGCTGGAGCGACTGCATCATCAACACCTGCCACAACAGCACCCAATAGCATTGAGAATCCAACATCGGGTAGCAGTGGCATTGTTGGGGGGGTCGGCAATAATAATAAAAACCTGAGTACAACAACAGCAACAATAACAGGAAATAGTAGTAATAGTAGTAGTAATAATAATAACAATAGCAACAGTAGTAGCAATAGTAATAATAATAATAGCAACATAACGGCGACAACATCAACTACGGCCGCTGTTGCGTAG
Protein Sequence
MSNSPAALNSYAISSKLVSEFAGRLTKWDKNLITLHWVPDHVFVEEADARNKSYDNSNGTTADMGANLIKIKIQIDRAIEVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKSAKAASVPSPAGSSNSQDSFPAPVAANTTIDSYPGYPSGYPSGAQPDYNAGAQIQRPPSQTNAQTPHAGNTQATAGDNISVSNPFDDPVGAQPRAPYQQGSTYPPVSRSQGGPYPGQPGYNQYGSSEQYNSSVPAGQFTQGQGQFPPQNRTMYPPYGPEGEASSPAANTYPYASRPYNQPPPGATQTVPPPGGSTTTPTGPPTGAGASPSTYPPAAPQQPDYYRAPPEQSPQPRRHPDFVKDSQGYAGYNQRPQMYGGWQGGAGQYRGQYPPSPTPQAWCNSPRASGPPPPPNQQAAAQWDQHRYPTQSQPPYPANQQQPWTNMNSPQQNPGSPLRPPPQRLPGSGSVVGLSTTVAISAGGKPPFNMPPPQPSGSSGVPPPGPPGSVGPQPGVVVSGPSIPPGPNVMPGGSKATPPPPQPGPFPPTAQMQKKDIVFPPDSVESTTPVLYRRKRLVKSDVCPIDPWRIFMSLQSGLLSESTWALDILNILLYDDSTIQYFGLTHLPGLLSLLLEHFQKNLAEMFENENNACVTSICSRSRARHYENNADKDCNYNVDLGQLMAPTNTDEKVLLLSNTPNYTMVSRKNMPVRIQNAEDDIFVSDQLKPWDFDSNKKYQLTVPIGSDAWTYDHIERDPHDNVIDVFKSEIIDIPFARYIGGRRSRKDKSVRLFHDYLDRDEVGVGGDDEEDSNNKVLAFNKKRRHISISSNTSSNNNKNGLTNLVGSAKKCKMNFLEASGGDGSSPHAISIKAEVKKEETEDVVVGADSLVCERSSDNLIKPKDLLDSDCREVDMDIEHPRVLLNGAPPPSKGSDFDPKSSVRDPASVLQRRRMSGYEDECYTRDEASLYLVNESQDSLARRCICLSNIFRNLTFVPGNETILAKSSKFLALLGKLLLLNHEHLLRTPKTRNYDREEDTDFSDSCSSLHGEKEWWWDYLITIRENMLVAVANIAGHLELSRYEEIITRPVLDGLLHWAVCPSAHGQDPFPSCGSNSALSPQRLALEALCKLCVTDANVDLVIATPPHSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSSMARSVALQSPCISYLVAFIEQAEQTAIGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLSRHPDNRSLFMQQEPRLLGLVMSHILDQQVALIISRVLFQVSRGPGPMPSMEYRLQQRQQLHQQQQDNIKSNENRKLMQQQNAQQQLPAIVVDEVGCTTAGGDLSTNANVASTATVIAVTNFSSSNVHSSNSNSSSSCYSNSSLTCNKSEEILVPPSATLNDISNSSNSSCGSSNSGSNITAPIGATIAPSIASPSSSSSTASSSAGATASSTPATTAPNSIENPTSGSSGIVGGVGNNNKNLSTTTATITGNSSNSSSNNNNNSNSSSNSNNNNSNITATTSTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01223173;
90% Identity
-
80% Identity
-