Lobt017227.1
Basic Information
- Insect
- Leucophora obtusa
- Gene Symbol
- pnr
- Assembly
- GCA_949987735.1
- Location
- OX465295.1:334835911-334843634[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-17 2.7e-13 51.0 7.7 1 34 523 555 523 557 0.97
Sequence Information
- Coding Sequence
- ATGGAACCACAAACGCAACAACAGCACCAAGAACAACAACAGCAATTGCAGCAGCATCAACAGCAACAACAGCAACAGCAACAACGTCATCAACAACAACTACAGCAATCTTTAGAAAAACATCATCAACAGTTAATAGACAAAATCAAAACCGAAGTTAATAGTCAAGAACATTTAAATCATCAAAATCCAAATTCcacaataaaaaattcaaatcaAACTGAACAACAACCCCAGCAGCAACAACAACTACCACAACAATTAACTActcatcatcatcatcaacaacaACCATCGCAACCACATCAGCAACAGCACCAACAATCACCACAATCCCAGCAACAACAAAATCCCACCACTATTATACAAACTCAACAATCACAACCCGTCAATGCTGTTATACAAACCCAAAATACCcaacaacagcaacaaccaCAACATCAAACCCAAGATGAATATGTACCCATACAGCGATCTCAACAACGGAGATTTATAACAACATCTGGAGACATagTAAATCGTGATTCTGATGAACCAGAACCAGTAAGCGAATATCAACGTCAACAACATCGTCATTCACCTGTAGATTATGTACACATGGCTCCACGTAATGAAGAACAGCAGCCACCACCTGGAACCACAGTTTATACCTATGCCACCAACGAAAATGGTCAGTCTATAATATGTGCCACAGAAACTACAGCGGGCCCCATAAAATTAGAATCAATCGATAAAGATCAGCTTAATAATGAGGCCCAGCAACAGCAACAAATACAGCAACAACAATGTCCTACTCCCAATGGCAACTATACCGAATCCTTAGTAGTTCCAGCTTCTGCGTTACATCATCAAATTCCTCATAATCTATCTAGTTCAGCGCATTTGCTACCACCCCATCCAACACATTTATCGACAGCACCACGCTTTGAAGATGATAATCGTTTTGCTCACACGATTAGTGATAATGGTAGTGGTCCTCCGACACTATATTATGATGCACCCATTGTCGATGCCACAACACATCCAAATGAAGCAAAAACCTTTACCGATTTGGGCAATTCACATTATTTGAATTATTCTTCGAATGGTTCATATCAATTGACTCAAAATAATACCATTTATAGTGTATCACCAGCACCAAATCAATTGATAACAAAAGGTGATCCAAATTTGAGTTTGATTAGACAACCAGTGCAATATCAGTCGATGTTATTTGATCCGGTTAATTCATCGGTACCTGAGTCAGGGTTATGGACAAGTGGTGTGGAATATTCAAATATGGGATTTAATTATCATCAGCAGGTAGTTGAAGACTATCCCCCTAGTAATATATCAGGAAGTTCTTGGCCACCTACTAATTCTATATCACACTATGAAACACCTCCACCACTAACGGAACTTAAATGTGATCAATGTAATTCACTACTTATGGGTAAGGGGAATACATTGTTTTGTCCCACATGTTGTGGTGGCTCCTTACGACAAACTACACGAGTGGGTCCTAGACAATCAAAGCCCAAGGCAACAGCTGCAACGGCCAATAATAATAGACGAACTGGTGTTACCTGTGCCAATTGCCAAACGAATTCAACAACATTATGGAGACGTAACAATGAGGGTAATCCTGTGTGTAATGCCTGTGGCTTGTATTATAAACTACACAATATGAATCGTCCTTTATCCATGAAAAAGGAGGGTATACAAAAACGTAAACGTAAACCAAAGAATAATGGTGGTCCACCCATGAGACCACAATTACCTAGTCTACCACCAGGTGGCGGTAATCTGATGGTTACCAATGGCCCATTATATCCCTCACAAGTTTCTACCATTGGTCTGCCTTTAAATGCTCAACCGCCAAATCAAAATGAACTGCAAGATATGTCTACTGGCTCTACACGTACAATATCAATTGTCCATCCCGAAATGAGTTTGAACATGTCAAGAACACATGTCACCTCAGATAGTCATTCACCCTATAGTAATCCACCATCACAAAGTCAATCACCTCATTTACCAAATGCAGCCAGCTTTAAAGTACCGCCAATTGAAATGCCAAGAACTTCACAAAGTAGTGAAATGCCCAGCGTTATAACACGCACGGGATTGCCAGAGAGATCATCgaataattaa
- Protein Sequence
- MEPQTQQQHQEQQQQLQQHQQQQQQQQQRHQQQLQQSLEKHHQQLIDKIKTEVNSQEHLNHQNPNSTIKNSNQTEQQPQQQQQLPQQLTTHHHHQQQPSQPHQQQHQQSPQSQQQQNPTTIIQTQQSQPVNAVIQTQNTQQQQQPQHQTQDEYVPIQRSQQRRFITTSGDIVNRDSDEPEPVSEYQRQQHRHSPVDYVHMAPRNEEQQPPPGTTVYTYATNENGQSIICATETTAGPIKLESIDKDQLNNEAQQQQQIQQQQCPTPNGNYTESLVVPASALHHQIPHNLSSSAHLLPPHPTHLSTAPRFEDDNRFAHTISDNGSGPPTLYYDAPIVDATTHPNEAKTFTDLGNSHYLNYSSNGSYQLTQNNTIYSVSPAPNQLITKGDPNLSLIRQPVQYQSMLFDPVNSSVPESGLWTSGVEYSNMGFNYHQQVVEDYPPSNISGSSWPPTNSISHYETPPPLTELKCDQCNSLLMGKGNTLFCPTCCGGSLRQTTRVGPRQSKPKATAATANNNRRTGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGGPPMRPQLPSLPPGGGNLMVTNGPLYPSQVSTIGLPLNAQPPNQNELQDMSTGSTRTISIVHPEMSLNMSRTHVTSDSHSPYSNPPSQSQSPHLPNAASFKVPPIEMPRTSQSSEMPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00717371; iTF_00371810;
- 90% Identity
- iTF_00717371;
- 80% Identity
- -