Basic Information

Insect: Leucophora obtusa
Gene Symbol: -
Assembly: GCA_949987735.1
Location: OX465297.1:13750808-13766228[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.003 0.31 13.3 0.2 1 23 1084 1108 1084 1108 0.91

2 8 0.00027 0.028 16.6 4.0 1 23 1602 1625 1602 1625 0.97

3 8 2.2e-06 0.00023 23.2 3.6 2 23 1651 1672 1651 1672 0.97

4 8 0.00045 0.048 15.9 3.5 1 23 1678 1700 1678 1700 0.98

5 8 0.0036 0.39 13.0 1.8 1 23 1706 1728 1706 1728 0.99

6 8 0.00019 0.02 17.1 0.8 1 23 1734 1756 1734 1756 0.99

7 8 0.0019 0.2 13.9 0.1 3 23 1764 1784 1763 1784 0.97

8 8 0.0025 0.26 13.5 3.1 1 23 1790 1812 1790 1813 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.003	0.31	13.3	0.2	1	23	1084	1108	1084	1108	0.91
2	8	0.00027	0.028	16.6	4.0	1	23	1602	1625	1602	1625	0.97
3	8	2.2e-06	0.00023	23.2	3.6	2	23	1651	1672	1651	1672	0.97
4	8	0.00045	0.048	15.9	3.5	1	23	1678	1700	1678	1700	0.98
5	8	0.0036	0.39	13.0	1.8	1	23	1706	1728	1706	1728	0.99
6	8	0.00019	0.02	17.1	0.8	1	23	1734	1756	1734	1756	0.99
7	8	0.0019	0.2	13.9	0.1	3	23	1764	1784	1763	1784	0.97
8	8	0.0025	0.26	13.5	3.1	1	23	1790	1812	1790	1813	0.96

Sequence Information

Coding Sequence: ATGAATGACAACGTACAATTAGCCAGGCAGCAAAAACAGGTACAATTACCGGATCATTTAAAATGTGGTGAGGTGTATACTTGGTTGTGCGAGGGGGAATTATATGCGGTGGAATGTAAAGTATGTGAAGATCGACCAATGTGTCCTTTATCCGAATTTCCACAACATATGGAAGTGTGGCATACAGATTGGGAAGAAACGTTGGGAGAAGATGACAAAGATTATCCAGAACATAATGAAGATTCATATGGTGCTGAAGATCAACAATTTGATGAAGTTAATAATGatctttatttattatttgaTCCCGAAGATAGCGTTTTATATGAAGATGAATATCCTATAGAACATGTAGAAAGTGAAGCAGAAAGTTTAGAACCATTTGAACAGGTATTAATCGAACAAGACAGTAACGTAGATTCTACACAAATTAACGAACATGAAGATGAAGAAAAGACAAAAGAATACCACATGAAGAAGttaacaaaaacaacaactgTAGATGAAATTCTTGATCAAGATCATAAATTACAACAACTTAATATAAACAATTCAATAAAAGAGAATTGTAAACTAAAAGAACAAAATAAAGAGTTAAGAGAATATGAGAATTTAACAACAGAGAGTAGTGACACTACAAAATATCTAATTAAAGATATAAGAGAAAATACAAAAGAATTAAGAGATCATGAAAAATTTATGACCGAAAATGAAAGAGTTCATAGAAATGATTTAGGAATTCAAAATTGCACTAAAAGATCGGAAAATTTAAGTAATCATgaaaacaaaagtaaaaaaatatcaCCTAGAAAACGAAAAATAGATAAAAGAGGTGCTACAGAGAATGATGTTATTATTGAATTAGAAGAAGTGCCTTCAAACAAATTTAATACACCAGTAAAAGAAAGCGAAAAGCAAAAATTGACGGAAAACTCCAGTTTGGAAAGTCCAGATTTAAGTCCATCAAATATTACAAGGATGTCGTTAAGGCGTAGTAAAAGAAAATTAACCGAAATTTCTTCccaagcaaaacatataacAACAAAATCTGATAATCAATATcttaaaattttagaaaattctaaaaaatctCAAGATTTTAAACAAGATTCAATACAAAATCTTGAAAATTCTAATAACTCAAAAGAAAATCAAACAAATAAGAAAACAACTTCCTTTAAAGTACAACAACGAAAAACAAAAGATACTAAAGTAAAAGATAAATTGAAAGATAGCTATGAAAATATCTGTGAtttagaaaaaactttatttaataaTGATATAGAAAACTTGGAAAATTCTAAAACTATTAAAGAAATTCTTACAAATACGAGAAAACCTTTAGAGAGAGTACAAAAGAGAAAAATAAGTGATTTTGCTCAAGAAATTAAAGAAAACGAAAATTGTGATGAAATTGTAAAAACCATTAATGAAAATGAAAACTCTCAAAACTCTACAAAGAGTAATATAACTAGTGAAAACTGCTCTTTAAGAACGAAGAAAAGAAAAACGAATGCAGCAGAGAATATCTGTGATTTACAAGAAAATATAGAAAAGAGTTTAACATCAAATTTAGACGAATGTCAAAACTCTATAAAGAGTAACATAAATAGAAGAAATACCTCCTTAAGAGTGACAAATAGAAAAGAAAAACTTGCAGCTTCcgatttaaataaaaagttttgtgatttagaaaaaagtttgttTGCAAATAACGATGAAAGTATATGTGATTTACAGGACAATTTTAAAGAAAGCTTATCAGTAAATCTAAAAGAGCCACAAAACTCTACAAAGAGTAACTTGAATGTGGGAAACTTCTCTTTGAGATCGAGAACTAGAAAAGCAGAACTGGCATCAATTGATCAAGCTGAAAATATTTGTGATTTAGGCAAAATATTGTTTACTAATGAAGAAGAAATTCCAGTGGAAAAGACAGCACCGCTTTTAAGATCACAAAGTAGAAAAACAAAAGAAGAAGAGAAGTTTAAAAACCAATCAATAGAAACACTTAATAATAATGCAAATGTTGATGATTTAGTTGAAGCAACTAAAGAGCCTTCTAGTTTAAATCAAACACCAAATAAGAATTATTTCAATTTGTCAACTTTTGATATTCCCAAAAGTAGTTGCCTTAAGAAGagaaaagttttgtttagaAAATCAAGAGAGACATCAGCATTTCTAAAAAATCTCAGCACATCTTCTGAGTCCTCCTTAGATTTAGAAAAAAGTATACCTTCCTTAACGCtagaaaatttaaaatctcAAGAACTTGAATTACTTAAAGCCACACAagaaaatttaagaatttctaaaaattctCCAGATATGGAGAAAAATTCTTTTTGCGCTGATAGCGAAACTTACATGGATATTTATGATTTATTAtcaacaaatattttagaaaatCCTACCAATTCTTCATACGGCACAGGATCTTCTTCATATTTTTCACCAGCCTCTTTAACAAGTAATGATATGAACGTGAATCCTACTTCGTTGAACtgtaaacaaaatcttaataAATTATTTGACACTTTTAATGATCAACAATTAACATCTCAATCTCCCAAAACAGAAGAAGAACATTTTGAGTTTTATAAACCCAAAGAAAAGTTAACGAAACATCATATTCTGCAACTCATAGCACTCTACAAAGAACATCCTCGCCTGTGGGATCAGTCTCACCCCGAATTTTGTGATTCCCAGTTAAGTAGACTCTCTTGGCAAGATATAGCCGATAAGTGGAATGAATACTGTAAACGTAAATTCACCATAGCCGAAGTACGCATTAGAATCTGTACCTTATGTCAACGTTATCTAAAAGAGCGAGAACGTTTAGAGCTAGAAGGAGAATTAGATGACAGTTGGAAATTTTCCTACTATGAACAAATGCAATTCTTAGAACAGCAAAAATCTCTACAAACGAGACGTGAACTATATGATCAACAAAATGAGAAGGTGGTGGAAATTTACCAACATTTCCCAGTACTTTGGCATGTGGGTTGTTATAATCTGAGACAAGCTTCAGAGCGAGCAAGAGCCTTTCAGAGCATTAGTACCGCGCTCAGATTGTGTGGTATACATCTCTCCTCGCTGGAAGTGCAAAAACGTATTAGATCTCTTAGAAAATGTTATCGTTTAGAAAAGATACGCTATTTACATTGTCAAGTAGAACAAACAAAATTTGAGTCAAGTTTCCGACATTTTAAGACAATGCAATTTCTAGACAAACATATAGATCCTTTTGTTTGCCGTATTTGTGgtaaaatatttgaaaatttaacgGGTTATAGGGAACACTTGGAAACAGAAAATCATGGTGGTATTTTGGAAGAAGATAGTGAAAGTGAGAATGAAACTGAAGACAACGATAAAGATTTTGAAAGGATGGAGGATAATATTAAAGAATTAGAAGATACTTTAAAAACTAACCCTAATGAATTGGAAATCCAGACCAATCTTCCTAAGGAAACTCTAGATACAGAAACTGCATCATATGCAGAAACAACTTTAACTTCTATATCCTATTTAAATGAAGTTACTTTACCTACTGCCCCCATAATTAAGGAAGTCTTGATTTTTCCAGCCAACTCAACGGAACAACCAATTTCTAGTCCTCTACAACTGGACAATCAATTAATTGAAGAAATTATGAAAACTATTAGCAATGATGATAGTTTTACTGCAAAATCGTTAGATAACaTTATCAACTCAGTTAATAATTGTGTAGACATTTCTGTAAATAATTGCATTAATTCGGAAAATTTACCCTCTACAATTATGGAAATGGAGTATCCAAATCTTATTGTGCAAAATGAAATTGTGATCGATCAAACAATGTTGGATATGGAAATTCCAATTCATAACGATCAAACTGATATGGAAATAAATCCAAGTAATTTGAGTGAGAGTCGGGAATTTTCAGAACAAAAGGCTGATCAGACTAAAACGGCAGTGAATCAAAATCATATAAATGAGAATCAGGAATTAGAACAGACTCCCACAGAAAATAATTCTCCTCCCCCCATTGTGGTCAAAGTTCAATGTGCCGACTATTCTTTGGATCTTAAACTAAACACTGAAAAAGAAACACACAAAATTCCCGTTTGTATTGATGATCTAGAAATTGATACTAATGAAATGGATGGTATTTTTGCTCGCTTACCTAACGATGATATACGTAAAATGATTGCTATGTATCGTAAATATCCCCAGCTATGGAATCCTAATCATTTGGATTACAATTCTCGTAATTTACGTAGACAAGCTTGGTGTACTCTAACGGCGGAATATTGTAAATTATTGGGTAGACAATTATCTTGGCGGACAATACATCGTAAATTAATGGATTACGCTAAATACTATAAGAAATTGATAACGGAACAAAAGGATGACGGGGAAATGGAAATTAAATGGATATTCTATAacgattttaaatttttggatgATGTGATTGCTGTCCACGACGAACTTCAACGTAGTGTCCATCATCGtgataataatttcaaaattataggtatttataaatatttaccCCAACTGTGGGATATCAAACATCCCGATTTCAATAAACGACCAGTAAAACAACGTAATATTGAACTAATGTGCAATCGTTTACAAGAAGAATATAATCTACAAATAACACCAGAACGTTTAAAAAATCGTCTAACTGAGTTGAGAGCTCAATACAGAGCGGCCAAGAAACAACGATTGAAAGTTTTCAAAACTCAACAAACCTATACACCCGACTTTGAATTTTATGAAGCTCTACTATTTATAGATCCTCATATAGATCCTTTCATATGTGAACAGTGTAATAAGGAATTCAAAAAGCTTACCGACTTTAATCATCACATGCGTAAAGACCATGAAAAAAAGAGAGTTTTAAGGCAAAAGCCACTTTCGCCGACTGATCAAAAAGAGGGTAATAACCATCCAGAAAATGTCTGCCATATATGCGGTATTAAATTTACCACCAAAAGCAATTTGGTACATCACATACGGCGTCATGATGGGATTAAAAATTTCGAATGTACCTTGTGtgtaaagaaatttttctcttcaCACTCCTTAAAAATTCACATAAGGTCTCACACTAAAGAATGTCCTTATACTTGTGAAAAATGTGGCGCCTCATTTGTATGTGCCAGCAAATTGAATCAACATGTTAAACGGCATACAAATAAAAAAGATTTCCAATGTGATTATTGCCCCAAGGCCTTTTTTACAGCCTTTGAAATGGATAGGCATGTGCGGCGACATTTAAATATACGCGATAAAATCTGTCCTATATGTAAAAAATCCTTTGTTGTGGGTTCATCGTACTATGCTCACATGATGTTGCACAATGATACAAAACGATTTGAATGCGATAAATGTGACATGAAATTTGCCCAGTATGCGGGATTGTATAAACATAAAAAGAGACATcattaa
Protein Sequence: MNDNVQLARQQKQVQLPDHLKCGEVYTWLCEGELYAVECKVCEDRPMCPLSEFPQHMEVWHTDWEETLGEDDKDYPEHNEDSYGAEDQQFDEVNNDLYLLFDPEDSVLYEDEYPIEHVESEAESLEPFEQVLIEQDSNVDSTQINEHEDEEKTKEYHMKKLTKTTTVDEILDQDHKLQQLNINNSIKENCKLKEQNKELREYENLTTESSDTTKYLIKDIRENTKELRDHEKFMTENERVHRNDLGIQNCTKRSENLSNHENKSKKISPRKRKIDKRGATENDVIIELEEVPSNKFNTPVKESEKQKLTENSSLESPDLSPSNITRMSLRRSKRKLTEISSQAKHITTKSDNQYLKILENSKKSQDFKQDSIQNLENSNNSKENQTNKKTTSFKVQQRKTKDTKVKDKLKDSYENICDLEKTLFNNDIENLENSKTIKEILTNTRKPLERVQKRKISDFAQEIKENENCDEIVKTINENENSQNSTKSNITSENCSLRTKKRKTNAAENICDLQENIEKSLTSNLDECQNSIKSNINRRNTSLRVTNRKEKLAASDLNKKFCDLEKSLFANNDESICDLQDNFKESLSVNLKEPQNSTKSNLNVGNFSLRSRTRKAELASIDQAENICDLGKILFTNEEEIPVEKTAPLLRSQSRKTKEEEKFKNQSIETLNNNANVDDLVEATKEPSSLNQTPNKNYFNLSTFDIPKSSCLKKRKVLFRKSRETSAFLKNLSTSSESSLDLEKSIPSLTLENLKSQELELLKATQENLRISKNSPDMEKNSFCADSETYMDIYDLLSTNILENPTNSSYGTGSSSYFSPASLTSNDMNVNPTSLNCKQNLNKLFDTFNDQQLTSQSPKTEEEHFEFYKPKEKLTKHHILQLIALYKEHPRLWDQSHPEFCDSQLSRLSWQDIADKWNEYCKRKFTIAEVRIRICTLCQRYLKERERLELEGELDDSWKFSYYEQMQFLEQQKSLQTRRELYDQQNEKVVEIYQHFPVLWHVGCYNLRQASERARAFQSISTALRLCGIHLSSLEVQKRIRSLRKCYRLEKIRYLHCQVEQTKFESSFRHFKTMQFLDKHIDPFVCRICGKIFENLTGYREHLETENHGGILEEDSESENETEDNDKDFERMEDNIKELEDTLKTNPNELEIQTNLPKETLDTETASYAETTLTSISYLNEVTLPTAPIIKEVLIFPANSTEQPISSPLQLDNQLIEEIMKTISNDDSFTAKSLDNIINSVNNCVDISVNNCINSENLPSTIMEMEYPNLIVQNEIVIDQTMLDMEIPIHNDQTDMEINPSNLSESREFSEQKADQTKTAVNQNHINENQELEQTPTENNSPPPIVVKVQCADYSLDLKLNTEKETHKIPVCIDDLEIDTNEMDGIFARLPNDDIRKMIAMYRKYPQLWNPNHLDYNSRNLRRQAWCTLTAEYCKLLGRQLSWRTIHRKLMDYAKYYKKLITEQKDDGEMEIKWIFYNDFKFLDDVIAVHDELQRSVHHRDNNFKIIGIYKYLPQLWDIKHPDFNKRPVKQRNIELMCNRLQEEYNLQITPERLKNRLTELRAQYRAAKKQRLKVFKTQQTYTPDFEFYEALLFIDPHIDPFICEQCNKEFKKLTDFNHHMRKDHEKKRVLRQKPLSPTDQKEGNNHPENVCHICGIKFTTKSNLVHHIRRHDGIKNFECTLCVKKFFSSHSLKIHIRSHTKECPYTCEKCGASFVCASKLNQHVKRHTNKKDFQCDYCPKAFFTAFEMDRHVRRHLNIRDKICPICKKSFVVGSSYYAHMMLHNDTKRFECDKCDMKFAQYAGLYKHKKRHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -