Lobt036817.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucophora obtusa
Gene Symbol
ken
Assembly
GCA_949987735.1
Location
OX465297.1:157448649-157453766[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.00013 0.014 17.6 0.9 1 23 400 423 400 423 0.94
2 15 0.28 29 7.1 7.3 1 23 440 462 440 462 0.96
3 15 8.7e-05 0.0093 18.1 1.3 1 23 468 491 468 491 0.97
4 15 0.014 1.5 11.2 1.9 1 23 497 520 497 520 0.94
5 15 0.00015 0.016 17.4 2.4 1 23 537 559 537 559 0.97
6 15 0.17 18 7.8 8.5 1 23 565 588 565 588 0.97
7 15 0.00017 0.018 17.2 1.7 3 23 607 628 606 628 0.97
8 15 0.065 6.9 9.1 7.1 1 23 874 896 874 896 0.98
9 15 0.8 84 5.7 2.2 3 23 915 936 914 937 0.96
10 15 2.4e-05 0.0026 19.9 0.6 2 23 1014 1035 1014 1035 0.96
11 15 0.001 0.11 14.7 1.1 1 23 1041 1063 1041 1063 0.96
12 15 0.054 5.7 9.3 4.9 1 23 1154 1176 1154 1176 0.97
13 15 0.15 16 7.9 5.3 3 20 1184 1201 1182 1202 0.90
14 15 3.1e-05 0.0033 19.5 2.4 1 23 1220 1242 1220 1242 0.99
15 15 0.0014 0.15 14.3 2.9 1 23 1248 1270 1248 1270 0.98

Sequence Information

Coding Sequence
ATGAATGGTACCGTGCTTGAAGATATTAACAGCTTCTGCTACCTCGGCAGCATCATCAACAGCAATGGAGGATCTAGTGCGGATATCGAATTAATTAATTGTGTCAGACGGTCCTTCGGCCTACTACGTCCTGTATGGAAGGCTTCCCATATATCcataaaaaccaaaatttgCTTATTTCACTCCAACGTGAAGTCAACTCTTTTGTATGGATACGAGACATGGAATGCCGCTGCCCGCGACATAAAAGCACTTCAAGTTTTTGCCAATAGGTGCCTGAGGaggattttaaaaatattttggccTAATGTGATGTCCAATAACGACCTGTGGACAGCCACCAATCAAGTTCCTCTGCGCACCGAAATATTAAGGCGTATGTGGAATTGGCTAGGTCACACATTACGTAAAACAGCAGATGAAATAACACGTCCAGCCATTGACTGGAATCCACAGGGCACCAGAAGAAGAGGAAGATCCGCCCACACTTGGAGAAGACAGCTGGACTCCGAAATAACAATCACGAGGAAGTCCGGGAATGAGATTAAACTAATAGCTTGTAACAGATCTCAATGGAATACATTTATTTGTCACTCTCCGTTAAGTCTTGTTATTCACGTTCAAAGTGCCCATCCTAAAAATAACAATGATACACAAAATGATATTTCAAATGTACATGAAAGTGTGGTGTCAGTTGACTGCAAGGAAAATATTAAAGATTTAAAACCCAtaactgaaataaataatataaatccaaaaaatgtcaaacaaagagaaattttaaatgtatgTGGAAGTGCGGTATCTAGTCTAGTTGACTACAATGTCCCTCCTCCCATAGCTGAAGTAAATGTTATAGATCCAGAAAATTACAAACAAAATGATACTTCAAATGTCTATGAAGGCATGACTTCTACTCTGATTGTTTACAAGGAAGATCTTATAGATTTAACTCCCATAACTACAATAAATGATGTAGATCCACTAAAAGTAGAAAGtaaagaaaatcaaaatttatcctGCAATAATAATGAAACAAAAGTCAATTCAATAACATCTATGGAAAAGTTGAATGACACCGAATATATAAGAGATAGTATTGAAGATATTATTATTAGCTTAAAAAATACAGATGGTCAAAGTAAACATGTGAAATCACAAACGAGTAAAATTGAATCACACAACGTAGAACGTCCCTTTCCATGCACTTTATGTGAAAAAGCATATACAACTAAGCGTAATTTGTATAGACATCTAGCTAATAATCACACGAAAAAGGAAGTTAACGATCTTAAACGAGATTTATCCAATAAAGGccatatttgttattattgtaATCAAAGTTTTGGTTTTTATTTCCATTATAAAAGACATTTAAAATTACACATCAAGGAACGTCCCTTTCCTTGCGCTCAATGCGATAAAGCCTATTTTCAAAATACCCACTTAAAAAGACATATAGATACTATTCACAATGTAAACTACCCTTTTTCCTGCGCTTTATGTGAAAAAGTCTATTTACAAAGATCTCATTTAAAAAGGCATCTAGATAATAATCACTCGAAAGAGGAAGTAGATAATCTTAATCAAACATCGGCAGAAAAACAACATACTTGTgaattttgtaacaaaagcttTAATACAATTTCTCAAATGGAACGTCATTTACTGATACATAATAAAAAACGTTCATACTCTtgtactttttgtaaaaaaatttataaacatgAATATCTTTTAAAGTACCATCATAAGAGTAAGCACTTGGAACAGAAAGTGAATgataagaaaaaatatttactaaagaaaaataaaatctgtAAAATTTGTTCTAAATCTTTTGATCGACTTAACAAATTGACTAGTCACTTGAGGAGGCTACATCAGACAGAGCGTAATTGTGTCAAAAATCCACTTAAATCAAACCATGGCGCAGAATTATACGATTTAATTCCCGTCAATGTCATGAAGACTGTTAAACTTTTTAAAGAGGCTGAAGATATGAAAGATAATGTTGAAGATGTTGTTAAGATAGAAAATTCCGAAGAACTCAATGTACAATTCTGTGCGCATAGTGACTATATTTTGGACCATTTGGACAGTACAACTTTAATAGATATATCTAAAACAGAAAGTGCTGATGAAGACATTCCAACTACAAATTATACCGAACCAGACAATATAATAGAAACGCCAACAAATTTATTTGCCATCAATGTAATTAATAGTAGTAATCATATTGAAGAAACTTATAGCCAtcaatatttaataaataattatgaAACAAAAGACGAGACAATAACGCATGgggaaattttaaaagattttaaacATACGGAATATATTGCCAAAGAAATTACTAATTTAGTAAATACCGATGAAATTAAAGAAGAATTTCTCCATTCAGAATTGGAAATAAAAGATGAGCCCTTAGAAGATAACACAATTCGGAATGATCTCCATGAACTTGGATGGTTTTCTATGAACCTGGCCTCGAATAAAGAACATTTAAAAGAAAGTCCATCATCACAAGAACATAAAATTCGcattaaaaatgtttattctaTAAATAGTTTAGAATGGCTCCCAACTGGTGTTTCTTTTACTGACCAACAACCATACTCTTGTTCTTTGTGTAAACAACATTTTAAAAGTAAGTTTCTTTTAATGTaccataaaaaaaaacactcacAACAGGAACCAAGTGGTTGTATCAAAGATTTTTCGATGCAAAAACGAATTTGTagatattgttttaaattatttgatgGAACTAAGAATTTAAATGGTCATTTAAAGAGGGTACACCACAAAAACCCTAATGATAAGAAAAATGCACCACTGCCAAACAATTGCGCTGTCCGTGAAAAGTCCCAGCTAACTTTTAATAACCTCGACCAAAATGACAATTCGAATAGTGAATTTCCAATGGATATTCATAACGAAAAACTGTCTGTAAAAGTTAACAGCGACTCCAATAAAAACGATTTGGAACCAATACCGAACTATGAAGATGACATTAATAGAGCAAACACTAACGTTTGTAGACTTTGTTCAAAATCATTTGCAAGTTCTTATAATTTAAAACGGCATTTAATAATACATACCGGAGAGCGTCCCTACGCATGTTCCTTGTGTAACAACTCCTATAGGGATAAACGTGATTTGATCAGACACCAAACACAACATTTTGATGGTTGTGAGAAACATCATATGGTGTTGACACCCGACAGCGCAGCAAATAATTTAGATCCACTTTCTATAAGATCTAAAGAAAACCATAATTTAACCGATAATGACGAAATAAGAGATAAATCAATACGAGTAACATCtggaaaaattttgaaaaatttaaaaacttcGGACGTTAGCCCAGATGAAATAACGATTTTGGAGAATTTTGATAATAATACTGATGAAATTAATAATAACAAGTTGCAGtctaaaaaagaaaataaacatatttgtaaaatttgttCCAATACCTTCAGCAACAATTGGTCTCTGAGATGTCACTTACGAATGCATTCTTCGGAAATGTCCTCTAATTGTTCTTTCTGTGGAAAATGCTTCAAAGACAAGTCTAATTGTAGTATTCATCAAGAATGTTGTTTGGAACAAAAACCTTGTTCGCAAAACGCTGAAAGGGAAAAGATATATACTTGTACAATTTGTTCGAAGATTTTTGCCAAAAATAGATATTTGAAAAAACACTTAATGAGACATACTGAAAAACGTCCCTATGTTTGTAATTTGTGTAGAAAACACTTTACAGATAAGTATGATTGGGACAATCATCAAAAAGAACATTCAATAGATAGATGTAAGAGTAGCTTAGAACATAAATTGAAATCCAATGAAATAAAAGATTTAACTGTATGTGaagaaaatcataaaaatacaacaaatatCATCAATGTTCTAAATTATCAAGATAATGAGGAACATTTAAACTATTTCGATAATATAGAAGACATTCCATCGTATGCTGCAGAAGAAATTATATATACTGAAAATACCGATTATACAAATGCTGCTAAACGTTTTGAAGACAATTTTACTAGAAGTGATGTTCAACGTACCAATAAAGATGATGATATAACAGAAGCTTCACGATACCAATGTTCGCTTTGCAAAGAGGTACGTAAAATTGCAAGAAGAGCCTTTAATAATCTAGCGCTAAAACTATGGAAAAGGTTGAAACTACCCAGTTGGAAATGTCATGAAGACGTCTTCATGATGGCTTAG
Protein Sequence
MNGTVLEDINSFCYLGSIINSNGGSSADIELINCVRRSFGLLRPVWKASHISIKTKICLFHSNVKSTLLYGYETWNAAARDIKALQVFANRCLRRILKIFWPNVMSNNDLWTATNQVPLRTEILRRMWNWLGHTLRKTADEITRPAIDWNPQGTRRRGRSAHTWRRQLDSEITITRKSGNEIKLIACNRSQWNTFICHSPLSLVIHVQSAHPKNNNDTQNDISNVHESVVSVDCKENIKDLKPITEINNINPKNVKQREILNVCGSAVSSLVDYNVPPPIAEVNVIDPENYKQNDTSNVYEGMTSTLIVYKEDLIDLTPITTINDVDPLKVESKENQNLSCNNNETKVNSITSMEKLNDTEYIRDSIEDIIISLKNTDGQSKHVKSQTSKIESHNVERPFPCTLCEKAYTTKRNLYRHLANNHTKKEVNDLKRDLSNKGHICYYCNQSFGFYFHYKRHLKLHIKERPFPCAQCDKAYFQNTHLKRHIDTIHNVNYPFSCALCEKVYLQRSHLKRHLDNNHSKEEVDNLNQTSAEKQHTCEFCNKSFNTISQMERHLLIHNKKRSYSCTFCKKIYKHEYLLKYHHKSKHLEQKVNDKKKYLLKKNKICKICSKSFDRLNKLTSHLRRLHQTERNCVKNPLKSNHGAELYDLIPVNVMKTVKLFKEAEDMKDNVEDVVKIENSEELNVQFCAHSDYILDHLDSTTLIDISKTESADEDIPTTNYTEPDNIIETPTNLFAINVINSSNHIEETYSHQYLINNYETKDETITHGEILKDFKHTEYIAKEITNLVNTDEIKEEFLHSELEIKDEPLEDNTIRNDLHELGWFSMNLASNKEHLKESPSSQEHKIRIKNVYSINSLEWLPTGVSFTDQQPYSCSLCKQHFKSKFLLMYHKKKHSQQEPSGCIKDFSMQKRICRYCFKLFDGTKNLNGHLKRVHHKNPNDKKNAPLPNNCAVREKSQLTFNNLDQNDNSNSEFPMDIHNEKLSVKVNSDSNKNDLEPIPNYEDDINRANTNVCRLCSKSFASSYNLKRHLIIHTGERPYACSLCNNSYRDKRDLIRHQTQHFDGCEKHHMVLTPDSAANNLDPLSIRSKENHNLTDNDEIRDKSIRVTSGKILKNLKTSDVSPDEITILENFDNNTDEINNNKLQSKKENKHICKICSNTFSNNWSLRCHLRMHSSEMSSNCSFCGKCFKDKSNCSIHQECCLEQKPCSQNAEREKIYTCTICSKIFAKNRYLKKHLMRHTEKRPYVCNLCRKHFTDKYDWDNHQKEHSIDRCKSSLEHKLKSNEIKDLTVCEENHKNTTNIINVLNYQDNEEHLNYFDNIEDIPSYAAEEIIYTENTDYTNAAKRFEDNFTRSDVQRTNKDDDITEASRYQCSLCKEVRKIARRAFNNLALKLWKRLKLPSWKCHEDVFMMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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