Lobt036437.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucophora obtusa
Gene Symbol
hang
Assembly
GCA_949987735.1
Location
OX465297.1:144888733-144914652[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.28 30 7.1 0.9 3 23 394 415 393 415 0.92
2 19 0.35 37 6.8 3.8 3 22 518 537 516 537 0.90
3 19 0.005 0.53 12.6 1.0 1 23 612 635 612 635 0.91
4 19 0.52 55 6.3 0.9 2 23 675 697 674 697 0.93
5 19 0.0027 0.29 13.4 0.2 3 23 765 786 764 786 0.96
6 19 0.00015 0.016 17.4 0.1 1 23 794 817 794 817 0.96
7 19 0.00012 0.012 17.7 0.0 2 23 905 926 905 926 0.98
8 19 0.00071 0.076 15.2 2.7 2 23 975 997 974 997 0.95
9 19 0.0092 0.97 11.8 0.2 2 23 1006 1028 1005 1028 0.95
10 19 0.0063 0.67 12.3 0.1 1 23 1041 1064 1041 1064 0.95
11 19 0.00028 0.03 16.5 1.1 1 23 1125 1147 1125 1147 0.99
12 19 0.0044 0.47 12.8 0.9 1 23 1155 1178 1155 1178 0.96
13 19 0.17 18 7.8 0.1 2 20 1186 1204 1185 1204 0.95
14 19 0.00014 0.015 17.5 0.3 3 23 1271 1291 1270 1291 0.98
15 19 0.0007 0.074 15.3 0.3 1 23 1326 1348 1326 1348 0.97
16 19 0.00069 0.073 15.3 0.8 2 23 1439 1461 1438 1461 0.92
17 19 2.7 2.8e+02 4.0 0.1 3 19 1482 1498 1481 1500 0.93
18 19 0.24 25 7.3 0.9 3 23 1516 1536 1516 1536 0.97
19 19 0.0044 0.47 12.8 0.7 1 23 1772 1794 1772 1794 0.97

Sequence Information

Coding Sequence
ATGACATCCGAAAGCGTAGTCTCCATTAACGATAATTTATCACTACGAATTTGTCATGCCTGCATAAGTTACTTAAATTCTTGGCAATCTTTTAAAAATCGTTGCCTCTCAGCACAAAACAAACAACGTTCATGGTTAGAAGGAACATCGACCGCATCTACCACCACATTACATAAAGCTCTACAATCTGCTGAACACCATCatacagcagatagtcattaCGATGATCAACAGCAGCAGCATCAGCAACAGCAACAAGATGAACAATCATTGGCATCTTCCATACTGGAGGGTATATCAAcgttaaaaaaacgaaaatctTTAACAGTCTATGTGAGTCCTAAATCTCAACAAAACAAATCCCAGCAAGaacaaaataaacaacaaaaatcTGTAACAAGCGATGTTATGCCGTTTAAGACCAAACGTCATTATACAAAACACAAACATGCGACACAGCGAAGACAGTTATGTCAAACGCAAACGTCTGCGTCACATACGACAACGTCGTCTCATGTACTTTATACTAGTGCTAGTAGTAGCagtaaatctaaaaaaaaatttgaaaagaaacATACAATGCAGCAACAGCAGCAATTGATTACTGCACAGCAATCATTTGTTATACCAGTAGTTCCAACTGCTGTAACTGTTACAATAGCAGCTACTTTAACCACTACGACTGCTACTACTACTTCTTGTACTAATACTACTACTTGTGCTACTTCTACAGTAACCACGTTAACTGACACGCCAACTATCAGCTGCAGCAGCAGTAACGTTTTGACGtctgctgctgctgttgtttCTGACAGTTTTGGTGTTGCTGGTGATGAATGTTTGGTTGAAGGGGGAACCTTAGCTTCTTCCTCCTCAGCAGCTTGTTCAAGTGCTGTCCAACAGTTACGTTTGTTTAGACGATACTCCTATAATCCTTTACCCGCAGTACAAATAAAAGACGAACCACTTGAAATTGATGAAGATTACAATAATGCAAAACATAATGATGAATCTGATGAAAACATGGTCGATCCGTCCATGTTTTTAGAACGTAACGCCGACGAAGGAGATTTTATGGAATCAACCTCAAATTATGATTTTGAAACAATAAGACATCCCCTTGAGCTAAAACCATTACCGGCTAGTACAACAATACGTATGAGTACTAAAGAGGCTGCATGTCGTGcctgtaatttaaaattttcaacaCGAGCCAATGCTAGACGTCATGAAAAGAATTTACATCCTAATCTATTTGAGACTTTGGAAGAAAATGATCAATCAGTTAATAAACAAACCGCCGCTTTAAATGCCTCCTTAGAATTGCAAAGAGCCGTAGCGGCTGCTGTGGCCGCAGATGCTTGTAAATTATCTAGTGGTGCTATTATCACACCACAAAAATATCGCCAAGAAGTTGTAAATGCTTTTAATAATAGTGAATTAAGTTTTGACTATGATAATCCTGAAAAATATCAAGAACTATTGACAGATGAGAAAATTGTTTTCATCCAACAAAATGATGAATTCTTAAGACAATATCAAACTATGACCTGCCGTTGTTGCAATAAATTCTATACgacttataaaaattttatggCTCATATGCGTAAGAAGTACCTAACATTACCAAGAAATTGCTGTTTCAATTGTTTAAAACTTAATGACTCCAAGGCTTTGTTTATATCACATTTAAAACGACGTAATTGTATTAATTTACATAAAGTCCTACATAGTCTAATGGCTAGAAACGCCAACTTTGCCGCTGCAGTAACAGCCACAGTGGCGGCTGCACCGGAAAAAATGCGTGCTAAAGAATTATTGGTTAATAAAATGTACGAATGTAAATTATGTCCAAAGACGTTCCGTATGAAATTGGAATTTCGTTCTCATGTCTATGAAGAGCATGCTGATGTCCAACGTAAAGATGTTAGTAGCACACAATGTTGTTACTGTGCCATGGATATTGAAGATCCAGCTGAACGTAAGAGACATTATAATAATATGGAATGTATTGTAACGTTGCGTTGTGTTACATGCGATACAAAATATGAGACACAACAAAAATTCATGGAACATGTTCAAGAAAAACATTTGGCTAATTTTGGCGAACCAAAATTATTACCAGGTGGTGTAGATAATTCACCAGGCAAGATTACTTCAAGTATGGGTATGGGCGGATGTGGTGGTATGGGAGGAGCTTCTTCAGCCGATGAATCCCGTAGTGGTTATTTTAATGTTTCACTTATAAATACCACACCCAAAGCACAATATTTTTCACGTATGCCACAGGCATGTCCCATATGTGGTCAACAATATAATAATTACAATAATGTTCTTAGACATATGGAATCTAAACATCCTGATCAACTACCGCAAACCTATAAATGTGTTAAATGTGGTCTGGGTTATCCAAGACTGTCGAATTTGCGAGAACATATGGTTAGTGCACATGGAGCTGATAAGGCACGCCATACGGGTTTTGAATATATTGTAAATGCAGATGCGGTTAAAAATGCTGCGGGTCCAACATCGCAAACACAAAATCCCTATACTGGGCGCTATGATTATGTAATGAAGGATTTGATGTCTATAACAAATGGTGGGACAGTTGCTGAAGATGATTGTGATAGTGAAAATGCCGCTAAGAAGATGCGCATGGATATTTCAATAAACAACAACAATGGCACTCCACCCACCAATGCTACACCCAGAGAATGTCCTATTTGTAATGCTGTATTTGCCAATAATATTGGACTTTCCAATCATATGCGTTCTCACCAGAGCgcacaaaataataatttcgGCATGGCTGCTTCAAAACTAATGGGTGCAGGTAATACCGGTCAATCGCAACTTAGTGGTCAACAGCTAATTTTAAAGAAATCTTTGGAACAAGCAGCTGATAGACGTTTCCGCCGTATGCGTTGTCGCATATGCCAGCGACGTTTCTCATCTAAAAAATCATATCGTAATCATATGCTTAACGATCATCAAATACGAAATGTGCAATTTATTAAATGCAAATTATGTGATGCCGAATTTGCCTACGAAAAGGGTTTGAAAGTTCATATGTTTAAAATACACAACACTTTGCTTAAAGATGATATGATTATAAAACAATATGAATGTGAAATATGTTCGATAGTTTATCGTACGGATGTTGAATTACAACACCATTTGGCTAATGTACATAATAAACAGGGCGATGATCCCTCAAATCTAGATGATGATGATTATAATGCCGACGAGTCGAGGGCAGCTGGTGGGGCAGGAGCTGCTAATAGTTCGGTAGGTGCTAATTTATCAGGGATTTCCACACCAGTAAGTGGTGTTGCAGTTACAGGAGATGGTCAGCCAGGTCCGCTATATTGGTATCAATGTAAATATTGTCCCTCCAActttaatacaaacaaaaaattggcCATACATATTAATTCACATGATGAATTTGATTCACATGATTATTCATGCAAAGATTGTGGTAATGTTTATAGTGGACGTAAAAGTTTATGGGTTCATCGTTATAAAAAACATCCTCAAATTCCGGAACCCTCAGAATGTGTAATGTGTAAAAAGGTATTTTTCGATACACAAATGTTGGAAAATCATATACCCTCCTGTAATCGGAAACCTATAGTTCAGTCTGCTGTTGAATCAACGGCCGCTGTATACAAACATAAAACTGGTGACGATGACGACGATGAAGATGATGACCAATCACGTGATGCTGACACTACTAAACTCCATCCATCGAAGAGTTCAACTGGTGGTACGGGAggtaatttaaaaataaaattaccTGAAGTTGCTTGTACCTTGTGTGGCGCTCGCTTTACAGATCAGGAACTATTTACCAAACATATACAAATGCATGAAAAGGAATTGTATACGGATAATCCTTTGGCTGCTATGTTTGATACTGGCCCAGCCGATCCAAATCAATTCTATATGGATCGCATTAATGATAATGGCGAGTATGCATGCGATGTGTGTGCAAAGACATTTACACAAATGACAGCACTTAAAGTGCATAGGAAATGGCATTTCAGAGGTGATAGCAAACAGAACGAAGCCGATCAACATATAGCGAACAGCAGCATACAGTCACAGCAACGGCAACATCAACAGCAACAGCATTATCACAACAAACCGCAACCACAACAACAGCACCAAATGCAACAGAAACATCCCCAGCAACGGATGCCGATCAGCCATCAACATCTACTGGGATTACAAGCGGTAGGTCTAATGCCACGACAATTTGCCACTATGGCCGGCAATCACAAACCGGCACAGAAACGTAGACGAGAGCTAAAATGTCAGTACTGTCCCTCCACCTTTATAAGCAACAATAATTTGAGGCGTCATTTGTACGAATTGCATAAAAATGAAATGGGCAATTTACCAGAACCACCGAAAATTGATTGTGATGTGCCGAATGCATGTCGTAAATGTAATGTGAAATTTGAAACAAAAGCCGAATGGATAGAACATAAAGTGGCTGAAGCTCGGGTAATGAAACCTTTCGGCCCATTCCAGTGGGGTTGTGATTTATGTGGAGCGTATGTGTCGCGTAAGGAGAAATTAATAAATCATTTACATAATCATATGAAAGATCAGGTGATATTGCCGGTAGATTATTCAGAACCAAAACAAGAACAACCTCAGCCACAATATCAAAACCCTGCCCAAATACAACAGCATGAAGAGCGAGGGGCAGGAGGTGGAGGAGGAGGAGTAACAGAAATGCCAGGATTTAAAAAGATTAAATTACCGGCATTGCCACAAATACAGAGTACTCTGCAAATTCGTCAAGATGAAGATGAATCTAGAGATAGTGTTAAAGATCAATACGATGAAGGCGATGATGATGAAGAGGCAGAGGAGGAGGGGGAAAATCATAATGAACAAACGGTGGGCGAAGAATTTTATGAAGATGAAGAAGAACAGGTGGAAGAAGAAGAATTTGATGATTTAGCTGTAGGTGCACAACAAACTGTAGGCGGCGATGAAGATGACGACGACGACGATGATGACGGCGATGATGCTGAAGACGACGATGATGATGGCGATGATGAAGATCCCTCTAGCAATGAAGACACCAACGAAGCTTCTAGTCTTAAAGTATCAAAACCTTCACAAATTAACCAGCTTCGCAGTTCAAATGATACTGAAGTTGATAAcgacgatgatgatgatgatgatgatgacgatgatgacTCCGATGAATTTGATGATGATGAAGATGATAATTCTTCAACGGAAAATCGTAAACCATCTTCTGCTCTTAATAATGCAACGGCGGTGTCACGTTTTTCTTGTGATCTATGCCAGGTGTATTTCGATTCACAACAAGAACTACAAAAACATGTTAAATTGCATTTCCTGAATGGCCCGGGATCAGTGACATTAACTGAAATAAAAACCTCCAAGTCATCTTCAAACAAAAGTCGCAGTAGTAGTAGTGATGTTGTGACAGTATAG
Protein Sequence
MTSESVVSINDNLSLRICHACISYLNSWQSFKNRCLSAQNKQRSWLEGTSTASTTTLHKALQSAEHHHTADSHYDDQQQQHQQQQQDEQSLASSILEGISTLKKRKSLTVYVSPKSQQNKSQQEQNKQQKSVTSDVMPFKTKRHYTKHKHATQRRQLCQTQTSASHTTTSSHVLYTSASSSSKSKKKFEKKHTMQQQQQLITAQQSFVIPVVPTAVTVTIAATLTTTTATTTSCTNTTTCATSTVTTLTDTPTISCSSSNVLTSAAAVVSDSFGVAGDECLVEGGTLASSSSAACSSAVQQLRLFRRYSYNPLPAVQIKDEPLEIDEDYNNAKHNDESDENMVDPSMFLERNADEGDFMESTSNYDFETIRHPLELKPLPASTTIRMSTKEAACRACNLKFSTRANARRHEKNLHPNLFETLEENDQSVNKQTAALNASLELQRAVAAAVAADACKLSSGAIITPQKYRQEVVNAFNNSELSFDYDNPEKYQELLTDEKIVFIQQNDEFLRQYQTMTCRCCNKFYTTYKNFMAHMRKKYLTLPRNCCFNCLKLNDSKALFISHLKRRNCINLHKVLHSLMARNANFAAAVTATVAAAPEKMRAKELLVNKMYECKLCPKTFRMKLEFRSHVYEEHADVQRKDVSSTQCCYCAMDIEDPAERKRHYNNMECIVTLRCVTCDTKYETQQKFMEHVQEKHLANFGEPKLLPGGVDNSPGKITSSMGMGGCGGMGGASSADESRSGYFNVSLINTTPKAQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGLGYPRLSNLREHMVSAHGADKARHTGFEYIVNADAVKNAAGPTSQTQNPYTGRYDYVMKDLMSITNGGTVAEDDCDSENAAKKMRMDISINNNNGTPPTNATPRECPICNAVFANNIGLSNHMRSHQSAQNNNFGMAASKLMGAGNTGQSQLSGQQLILKKSLEQAADRRFRRMRCRICQRRFSSKKSYRNHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDDMIIKQYECEICSIVYRTDVELQHHLANVHNKQGDDPSNLDDDDYNADESRAAGGAGAANSSVGANLSGISTPVSGVAVTGDGQPGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSHDYSCKDCGNVYSGRKSLWVHRYKKHPQIPEPSECVMCKKVFFDTQMLENHIPSCNRKPIVQSAVESTAAVYKHKTGDDDDDEDDDQSRDADTTKLHPSKSSTGGTGGNLKIKLPEVACTLCGARFTDQELFTKHIQMHEKELYTDNPLAAMFDTGPADPNQFYMDRINDNGEYACDVCAKTFTQMTALKVHRKWHFRGDSKQNEADQHIANSSIQSQQRQHQQQQHYHNKPQPQQQHQMQQKHPQQRMPISHQHLLGLQAVGLMPRQFATMAGNHKPAQKRRRELKCQYCPSTFISNNNLRRHLYELHKNEMGNLPEPPKIDCDVPNACRKCNVKFETKAEWIEHKVAEARVMKPFGPFQWGCDLCGAYVSRKEKLINHLHNHMKDQVILPVDYSEPKQEQPQPQYQNPAQIQQHEERGAGGGGGGVTEMPGFKKIKLPALPQIQSTLQIRQDEDESRDSVKDQYDEGDDDEEAEEEGENHNEQTVGEEFYEDEEEQVEEEEFDDLAVGAQQTVGGDEDDDDDDDDGDDAEDDDDDGDDEDPSSNEDTNEASSLKVSKPSQINQLRSSNDTEVDNDDDDDDDDDDDDSDEFDDDEDDNSSTENRKPSSALNNATAVSRFSCDLCQVYFDSQQELQKHVKLHFLNGPGSVTLTEIKTSKSSSNKSRSSSSDVVTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-