Basic Information

Insect: Leucophora obtusa
Gene Symbol: znf711
Assembly: GCA_949987735.1
Location: OX465296.1:20165157-20169961[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 2.7e-05 0.0029 19.7 1.8 1 23 10 32 10 32 0.98

2 19 0.022 2.4 10.5 8.0 1 23 38 60 38 60 0.98

3 19 0.0017 0.18 14.1 6.5 1 23 68 90 68 90 0.98

4 19 1.5 1.6e+02 4.8 7.2 1 23 96 118 96 118 0.95

5 19 3.4e-05 0.0036 19.4 3.1 1 23 126 148 126 148 0.99

6 19 0.00044 0.046 15.9 5.5 1 23 154 176 154 176 0.98

7 19 0.0071 0.75 12.1 4.6 1 23 184 206 184 206 0.97

8 19 0.00024 0.025 16.7 2.6 1 23 212 235 212 235 0.98

9 19 3.8e-06 0.0004 22.4 6.8 1 23 243 265 243 265 0.98

10 19 6.8e-06 0.00072 21.6 2.7 1 23 284 306 284 306 0.98

11 19 0.00023 0.024 16.8 6.3 1 23 314 336 314 336 0.98

12 19 3.4 3.6e+02 3.7 3.6 1 11 342 352 342 364 0.76

13 19 2.3 2.5e+02 4.2 7.7 1 23 376 398 376 398 0.97

14 19 9e-07 9.5e-05 24.4 3.0 1 23 406 428 406 428 0.99

15 19 0.00035 0.038 16.2 7.2 1 23 434 456 434 456 0.98

16 19 0.00092 0.098 14.9 2.4 1 23 464 486 464 486 0.97

17 19 0.00023 0.024 16.8 3.3 1 23 492 514 492 514 0.99

18 19 0.00039 0.042 16.1 6.5 1 23 522 544 522 544 0.98

19 19 9.8e-05 0.01 18.0 3.4 1 23 550 572 550 572 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	2.7e-05	0.0029	19.7	1.8	1	23	10	32	10	32	0.98
2	19	0.022	2.4	10.5	8.0	1	23	38	60	38	60	0.98
3	19	0.0017	0.18	14.1	6.5	1	23	68	90	68	90	0.98
4	19	1.5	1.6e+02	4.8	7.2	1	23	96	118	96	118	0.95
5	19	3.4e-05	0.0036	19.4	3.1	1	23	126	148	126	148	0.99
6	19	0.00044	0.046	15.9	5.5	1	23	154	176	154	176	0.98
7	19	0.0071	0.75	12.1	4.6	1	23	184	206	184	206	0.97
8	19	0.00024	0.025	16.7	2.6	1	23	212	235	212	235	0.98
9	19	3.8e-06	0.0004	22.4	6.8	1	23	243	265	243	265	0.98
10	19	6.8e-06	0.00072	21.6	2.7	1	23	284	306	284	306	0.98
11	19	0.00023	0.024	16.8	6.3	1	23	314	336	314	336	0.98
12	19	3.4	3.6e+02	3.7	3.6	1	11	342	352	342	364	0.76
13	19	2.3	2.5e+02	4.2	7.7	1	23	376	398	376	398	0.97
14	19	9e-07	9.5e-05	24.4	3.0	1	23	406	428	406	428	0.99
15	19	0.00035	0.038	16.2	7.2	1	23	434	456	434	456	0.98
16	19	0.00092	0.098	14.9	2.4	1	23	464	486	464	486	0.97
17	19	0.00023	0.024	16.8	3.3	1	23	492	514	492	514	0.99
18	19	0.00039	0.042	16.1	6.5	1	23	522	544	522	544	0.98
19	19	9.8e-05	0.01	18.0	3.4	1	23	550	572	550	572	0.99

Sequence Information

Coding Sequence: ATGCAACGCCATAGTGATGTACAACTTTTTGAATGCGAATATTGTGAAAAGAAATTTTCATCTGGTCATTATTTAAAAGCACACATTAAGGCACATACTGAGGAAAAACCTTATAAATGTGATGTTTGTCACAAACATTTTGCAGCTCAAAAATGTTTAAATCAGCACAAAAAATTACATATGGGAGAATCGGCAAAAGTTTACCACTGTCAACAGTGTGTTAAGAAGTATATACGTTCTTGTGACTTAAAGAAACACATGAAGATTCATACTGGAGAGAAACCATTTGAATGTGATATATGTCACAAACGTTACCGGTGTAAACTTGGTTTGAATCATCACAAGCAGTGGCATTCGAGAGATTCTGAACATAGTTTTCAGTGTAAACATTGTGAGAAGAAACTTTCAAGTGATGAGAATTTAAGAATTCACCTTAGAACACATGTTGGCAAAGGGCCTTTTAAATGTGACATATGTCACAAACGTTTTCAGTCTAGCAACTATTTGAAATCCCACAAAATCAAACATACGGGGGAAGCTGGAAGAGTTCATAGTTGTGAATATTGTAAGaagaatttttttcttaaagCTCAATTAATAACGCATTTGCATATTCACACCGGCGGATTGTCTTATAAATGTGATATGTGCGATCAACGTTTTCGAACTGCTGAAAGACTTAGTAATCACAAAAAGAGACGACATATCGGAAAAGTTGAACGGATTTTTATTTGTGAACAttgtaataagaaatgtaaaCGTAGTTCTAATCTTAAAGTCCATTTACGTACTCATACAGGCGAAAAACCCTATAAATTACACATTAAGAGACATACTGACGAAAAACCTTATAAATGTGATGTTTGTGACAAACATTTTGCATCTCAAAGCTCTTTAACTCTGCACAAAAAATTGCATATGGGAGAATCGGCAAAAATTTACCACTGTCAACAGTGTGATAAGAAGTATATACGTTCTTGTGAGTTAAAGCAACACATGAAGATTCATACTGGAGAAAAACCATTTGAATGTGATATATGTCACAAACGTTACCGGTGTAAACTTGCTAGGGATCGTCACAAGCAGTTGCATACTGGCGAAGGGCCTTTAATTGGAGAAAACCCATTTGAATGTGATATATGTCACAATCGTTACCGGTGTAAAAGTGGTTTGACTCATCACAAGCAGTTGCATTTGAAAGAATctgaaaataattttcaatgCAAACATTGTGAGAAGAAACTTTCAAGTCCTTCGAATTTAAGAATTCACCTTAGAACACATACTGGCGAAGGGCCTTTTAAATGTGATATATGTCACAAACGTTTTCACTCgaacaattatttaaaatctcaCCAAATCAGACATACGGGAGAAGCTGGAAGAGTTCATAGTTGTGAATATTGTGATAAGAAATTTTTTGCTAGAGCTGAATTAATAACGCATATACATATTCACACCGGCGATTTGTCTTATAAATGTGATATATGCTATAAACGTTTTCAAACTCCTGAAAGACTTAAAAATCACAAAAAGCGACATATCGGACAAGTTGAACGGATTTTTAATTGTGAACATTGTGATACTAAATGTAAAAGTAATTATAGTCTTAAAATCCATTTACGTTCTCACACTGGCGAGGAACCCTATAAATGTGAGATATGTCAAAAACGTTTTCGATATAGGGCTGGTTTCGTTAAACACAAAAAGAAACATACAAGCGATGCggaaaaaaactttaaaatgtGA
Protein Sequence: MQRHSDVQLFECEYCEKKFSSGHYLKAHIKAHTEEKPYKCDVCHKHFAAQKCLNQHKKLHMGESAKVYHCQQCVKKYIRSCDLKKHMKIHTGEKPFECDICHKRYRCKLGLNHHKQWHSRDSEHSFQCKHCEKKLSSDENLRIHLRTHVGKGPFKCDICHKRFQSSNYLKSHKIKHTGEAGRVHSCEYCKKNFFLKAQLITHLHIHTGGLSYKCDMCDQRFRTAERLSNHKKRRHIGKVERIFICEHCNKKCKRSSNLKVHLRTHTGEKPYKLHIKRHTDEKPYKCDVCDKHFASQSSLTLHKKLHMGESAKIYHCQQCDKKYIRSCELKQHMKIHTGEKPFECDICHKRYRCKLARDRHKQLHTGEGPLIGENPFECDICHNRYRCKSGLTHHKQLHLKESENNFQCKHCEKKLSSPSNLRIHLRTHTGEGPFKCDICHKRFHSNNYLKSHQIRHTGEAGRVHSCEYCDKKFFARAELITHIHIHTGDLSYKCDICYKRFQTPERLKNHKKRHIGQVERIFNCEHCDTKCKSNYSLKIHLRSHTGEEPYKCEICQKRFRYRAGFVKHKKKHTSDAEKNFKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -