Basic Information

Insect: Leucophora obtusa
Gene Symbol: Zbtb41
Assembly: GCA_949987735.1
Location: OX465296.1:20105922-20111691[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 2.8e-06 0.0003 22.8 1.1 1 23 8 30 8 30 0.98

2 20 0.0024 0.25 13.6 2.1 1 23 35 57 35 57 0.98

3 20 1.2e-05 0.0013 20.8 3.3 2 23 60 81 60 81 0.98

4 20 9.4e-06 0.001 21.2 5.6 1 23 87 109 87 109 0.98

5 20 9e-06 0.00096 21.2 4.6 1 23 117 139 117 139 0.97

6 20 0.0032 0.34 13.2 4.6 1 23 143 165 143 165 0.98

7 20 8.5e-07 9e-05 24.5 3.4 1 23 173 195 173 195 0.98

8 20 3.9e-06 0.00041 22.4 0.8 1 23 201 223 201 223 0.99

9 20 2.3e-05 0.0024 20.0 0.6 2 21 232 251 232 252 0.96

10 20 0.5 53 6.3 5.6 2 23 259 279 258 279 0.93

11 20 0.029 3 10.2 5.6 1 23 287 309 287 309 0.96

12 20 0.00053 0.056 15.7 3.0 1 23 315 337 315 337 0.99

13 20 0.028 3 10.2 5.8 1 23 337 359 337 359 0.97

14 20 0.0056 0.59 12.4 0.7 2 23 368 389 367 389 0.97

15 20 5.4 5.8e+02 3.0 2.8 1 23 395 417 395 417 0.94

16 20 3.3e-06 0.00035 22.6 4.8 1 23 425 447 425 447 0.99

17 20 0.0026 0.28 13.5 6.8 1 23 453 475 453 475 0.98

18 20 2.9e-05 0.0031 19.6 1.9 1 23 480 502 480 502 0.98

19 20 1.9e-07 2e-05 26.5 3.3 2 23 511 532 510 532 0.96

20 20 7.7e-06 0.00081 21.4 3.3 1 23 538 560 538 560 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	2.8e-06	0.0003	22.8	1.1	1	23	8	30	8	30	0.98
2	20	0.0024	0.25	13.6	2.1	1	23	35	57	35	57	0.98
3	20	1.2e-05	0.0013	20.8	3.3	2	23	60	81	60	81	0.98
4	20	9.4e-06	0.001	21.2	5.6	1	23	87	109	87	109	0.98
5	20	9e-06	0.00096	21.2	4.6	1	23	117	139	117	139	0.97
6	20	0.0032	0.34	13.2	4.6	1	23	143	165	143	165	0.98
7	20	8.5e-07	9e-05	24.5	3.4	1	23	173	195	173	195	0.98
8	20	3.9e-06	0.00041	22.4	0.8	1	23	201	223	201	223	0.99
9	20	2.3e-05	0.0024	20.0	0.6	2	21	232	251	232	252	0.96
10	20	0.5	53	6.3	5.6	2	23	259	279	258	279	0.93
11	20	0.029	3	10.2	5.6	1	23	287	309	287	309	0.96
12	20	0.00053	0.056	15.7	3.0	1	23	315	337	315	337	0.99
13	20	0.028	3	10.2	5.8	1	23	337	359	337	359	0.97
14	20	0.0056	0.59	12.4	0.7	2	23	368	389	367	389	0.97
15	20	5.4	5.8e+02	3.0	2.8	1	23	395	417	395	417	0.94
16	20	3.3e-06	0.00035	22.6	4.8	1	23	425	447	425	447	0.99
17	20	0.0026	0.28	13.5	6.8	1	23	453	475	453	475	0.98
18	20	2.9e-05	0.0031	19.6	1.9	1	23	480	502	480	502	0.98
19	20	1.9e-07	2e-05	26.5	3.3	2	23	511	532	510	532	0.96
20	20	7.7e-06	0.00081	21.4	3.3	1	23	538	560	538	560	0.99

Sequence Information

Coding Sequence: ATGGGAGAATCGGCAAAAATTTACAACTGTCAACAGTGTGATATGAAGTTTATACGTCCTTCTTATTTAAAGCAACACCTGAGGATTCATACTGGAGAAAAATTTGAATGTGATATTTGTCACAATCGGTACTCTTATAAACAGAGTTTGGATGATCACATGCAGTTGCATTTAAGAAAATGCAAATATTGCGAAAAGAAATTTTCAAGTGAAACAAATTTAAGAATTCACTTTAGAACACATTATGGAGAAGGACCTTTTAAATGTGATATATGTCACAAACGTTTTCGCAATAGCAGCTATTTAAAATCTCACAAAATCAGACATACCGAGGAGGCTGTAAGAACTCATAAATGTGAACATTGTGATAAGAAATTTGTACGTAAATCTGAATTAATAAGCCATACCGCCCGACACGATTTGCTTCATAAATGTGATATGTGCAATAAACGTTTTCAAACTCTTGAAAAACTTAGTGATCACAAAAAGAGCCACAGCGGACAACGTGAACGGATTTTTGATTGTGAACATTGtgagaaaaaatttaaacgTAGTTCTGGTCTTAAAGTCCACTTACGTACTCACACTGGCGAAAAACCCTATACATGTCAGATATGTCAGAGACGTTTTGCAGACAATGCAAATCTAGCTAGTCACAAAAAGACGCATATGGGCGATGCAGCAAAAACTGCAAAATGTGAATATTGTGATAAAAGATTTATACGAAATCTAGAGCTTCGGAGTCATATGAGACTATTTAAAAATGCAGAAGTCGAATGTGAAATATGTCACAAACGTTTAAAAAGGCGAAGTTTATACCATCACAGAAAGACACATATTGGAGAATCTGCAAAAATTCACAATTGTCAACATTGTGGAAAGAAATTTTTAGATCTTTATAAGTTAAAAATCCACACAAAACTCCATACTGGTGGAAAACTTTTTCAATGCGAATATTGTGAAAAGAAATTTTTACTTCATTCTTATTTAAAAGCACACATTAAGACACATAAATGTGATGTTTGTCACAAATATTTTACatctcaaaaaattttaactcaGCACAAAAAATTGCATATGGGAGAATCGCCTAAAGGGCAAAAATGTCAACAGTGTGATATGAAGTTTATGCGTCTTTTAGATCTTAAACAACACGTGTTGATTCATACTGGAGAAAAACCATTTGAATGTGATATATGTTACAATCTTTACGGgtttaaaaattgtttgaatCGTCACAAGGAGTTGCATTTGAGAGAATctgaaaataattttcaatgCAAACACTGTAAGAAGAAATTTTCAAGTGATTCGAACTTAAGAATTCATCTTTTAACACATGTTGGCAAAGGACCTTTTAAATGTGATATATGTCACAAAGGTTTTCACTCTAGGAACTATTTAAAATCTCACAAAATCAAACATATGGGGGAAGCTCATAAATGTGATGTATGCGGTAAACCTTTTCAAACTGTTGAAAGTCTTACTAATCACAAAAAGACACATATCGGACAAGTTGAACGGATTTTAAATTGTGAACATTGTGATAAGAAATTTAAACGTAGTTCTAATCTTAAAGTCCATTTACGTATTCACACTGGCGAAAAACCCTATAAATGTGAGATATGTCACAAATGTTTTGCATATTGGGGAAGTTTAGTGGCTCACAAAAAGAGTCACATGAGAGTACATACTAAAGAAACCCCGAAGCAGTCATAA
Protein Sequence: MGESAKIYNCQQCDMKFIRPSYLKQHLRIHTGEKFECDICHNRYSYKQSLDDHMQLHLRKCKYCEKKFSSETNLRIHFRTHYGEGPFKCDICHKRFRNSSYLKSHKIRHTEEAVRTHKCEHCDKKFVRKSELISHTARHDLLHKCDMCNKRFQTLEKLSDHKKSHSGQRERIFDCEHCEKKFKRSSGLKVHLRTHTGEKPYTCQICQRRFADNANLASHKKTHMGDAAKTAKCEYCDKRFIRNLELRSHMRLFKNAEVECEICHKRLKRRSLYHHRKTHIGESAKIHNCQHCGKKFLDLYKLKIHTKLHTGGKLFQCEYCEKKFLLHSYLKAHIKTHKCDVCHKYFTSQKILTQHKKLHMGESPKGQKCQQCDMKFMRLLDLKQHVLIHTGEKPFECDICYNLYGFKNCLNRHKELHLRESENNFQCKHCKKKFSSDSNLRIHLLTHVGKGPFKCDICHKGFHSRNYLKSHKIKHMGEAHKCDVCGKPFQTVESLTNHKKTHIGQVERILNCEHCDKKFKRSSNLKVHLRIHTGEKPYKCEICHKCFAYWGSLVAHKKSHMRVHTKETPKQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -