Lobt019259.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucophora obtusa
Gene Symbol
Zbtb41
Assembly
GCA_949987735.1
Location
OX465296.1:20120970-20150227[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 68 0.00028 0.029 16.5 0.4 1 21 8 28 8 29 0.95
2 68 0.038 4 9.8 6.2 1 23 36 58 36 58 0.98
3 68 0.00064 0.068 15.4 3.9 1 23 66 88 66 88 0.99
4 68 0.0015 0.16 14.3 6.3 1 23 94 116 94 116 0.98
5 68 0.0038 0.4 13.0 3.0 1 23 124 146 124 146 0.97
6 68 0.0056 0.6 12.4 3.3 1 23 152 174 152 174 0.98
7 68 2.1e-06 0.00022 23.2 4.0 1 23 182 204 182 204 0.98
8 68 3.1e-05 0.0033 19.5 3.3 1 23 210 232 210 232 0.99
9 68 0.54 58 6.2 2.8 2 23 242 262 241 262 0.90
10 68 0.00055 0.058 15.6 6.2 1 23 270 292 270 292 0.96
11 68 0.011 1.1 11.5 1.0 1 23 298 320 298 320 0.98
12 68 0.048 5.1 9.5 4.6 1 23 326 348 326 348 0.95
13 68 1.2e-05 0.0013 20.8 0.7 1 23 356 378 356 378 0.98
14 68 0.0011 0.12 14.6 3.6 1 23 414 436 414 436 0.99
15 68 0.017 1.8 10.9 6.9 1 23 442 464 442 464 0.98
16 68 0.0086 0.91 11.8 3.8 1 23 472 494 472 494 0.97
17 68 0.008 0.85 11.9 2.0 1 23 500 523 500 523 0.98
18 68 2.8e-05 0.003 19.7 4.6 1 23 531 553 531 553 0.98
19 68 0.0027 0.29 13.4 4.3 1 23 559 581 559 581 0.98
20 68 4.2e-05 0.0044 19.1 2.2 2 21 590 609 589 609 0.96
21 68 0.18 19 7.7 3.2 2 23 617 637 616 637 0.95
22 68 0.00021 0.022 16.9 1.2 1 23 645 667 645 667 0.97
23 68 0.0022 0.23 13.7 6.1 1 23 673 695 673 695 0.98
24 68 0.002 0.21 13.9 3.7 1 23 703 725 703 725 0.97
25 68 0.11 12 8.3 1.0 1 23 731 753 731 753 0.95
26 68 0.001 0.11 14.8 7.0 1 23 761 783 761 783 0.98
27 68 2.5 2.7e+02 4.1 8.8 1 23 789 811 789 811 0.95
28 68 0.0015 0.16 14.2 2.4 1 23 819 841 819 841 0.97
29 68 0.0021 0.22 13.8 3.0 1 23 847 870 847 870 0.98
30 68 0.00048 0.051 15.8 5.7 1 23 878 900 878 900 0.98
31 68 1.8e-05 0.002 20.2 1.4 1 23 906 928 906 928 0.99
32 68 2e-05 0.0021 20.1 1.3 2 21 937 956 936 956 0.95
33 68 1.2 1.2e+02 5.1 2.3 2 23 964 984 963 984 0.85
34 68 0.0021 0.22 13.8 4.5 1 23 992 1014 992 1014 0.96
35 68 0.016 1.7 11.0 2.4 1 23 1020 1042 1020 1042 0.95
36 68 0.0014 0.15 14.3 3.9 1 23 1050 1072 1050 1072 0.99
37 68 0.00065 0.069 15.4 5.8 1 23 1078 1100 1078 1100 0.98
38 68 0.0014 0.15 14.3 3.9 1 23 1108 1130 1108 1130 0.97
39 68 7.8e-05 0.0083 18.3 1.8 1 23 1136 1159 1136 1159 0.98
40 68 1.3e-05 0.0013 20.8 6.3 1 23 1167 1189 1167 1189 0.98
41 68 1.1e-06 0.00012 24.1 2.2 1 23 1195 1217 1195 1217 0.99
42 68 0.033 3.5 10.0 3.9 2 21 1226 1245 1225 1245 0.94
43 68 2.2 2.3e+02 4.3 4.5 2 23 1253 1273 1252 1273 0.89
44 68 0.0027 0.28 13.4 6.6 1 23 1281 1303 1281 1303 0.96
45 68 1.9e-05 0.002 20.2 0.4 1 23 1309 1331 1309 1331 0.98
46 68 1.7e-05 0.0018 20.4 0.7 2 23 1338 1359 1337 1359 0.97
47 68 0.00012 0.013 17.7 1.9 1 23 1367 1389 1367 1389 0.98
48 68 6 6.3e+02 2.9 4.0 1 23 1395 1417 1395 1417 0.95
49 68 0.00039 0.041 16.1 1.9 2 23 1420 1441 1419 1441 0.97
50 68 8e-05 0.0085 18.2 3.7 1 23 1447 1469 1447 1469 0.98
51 68 0.006 0.64 12.3 3.3 1 23 1477 1501 1477 1501 0.90
52 68 0.036 3.8 9.9 5.3 1 23 1505 1527 1505 1527 0.98
53 68 1.1e-05 0.0012 20.9 3.0 1 23 1535 1557 1535 1557 0.98
54 68 0.00053 0.056 15.6 5.9 1 23 1563 1585 1563 1585 0.99
55 68 0.00037 0.039 16.2 0.9 2 20 1594 1612 1593 1613 0.95
56 68 2.1 2.2e+02 4.3 1.1 2 23 1621 1641 1620 1641 0.78
57 68 0.075 7.9 8.9 8.4 1 23 1649 1671 1649 1671 0.96
58 68 0.0034 0.36 13.1 2.1 1 23 1677 1699 1677 1699 0.98
59 68 0.27 28 7.1 7.5 1 23 1705 1727 1705 1727 0.98
60 68 5.5e-05 0.0058 18.8 0.4 1 23 1735 1757 1735 1757 0.97
61 68 0.56 59 6.1 2.7 1 23 1763 1785 1763 1785 0.97
62 68 0.00081 0.086 15.1 0.8 2 23 1788 1809 1788 1809 0.98
63 68 8.2e-05 0.0087 18.2 5.5 1 23 1815 1837 1815 1837 0.97
64 68 0.22 23 7.4 1.0 5 23 1849 1869 1847 1869 0.90
65 68 0.31 33 6.9 3.3 1 23 1873 1895 1873 1895 0.96
66 68 3.5e-06 0.00037 22.5 3.4 1 23 1903 1925 1903 1925 0.98
67 68 1.3e-06 0.00014 23.9 0.5 1 23 1931 1953 1931 1953 0.99
68 68 3.2e-06 0.00034 22.6 0.8 2 23 1962 1983 1961 1983 0.97

Sequence Information

Coding Sequence
ATGGGAGAATCTGCAAAAATTTACAACTGTCAGCAGTGTGATAAGAAGTTTATGCGTCCTTACGAACTAAAACTACACGTGAGGATTTATACTGGAGAAAAACCATTTGAATGTGATGTATGTCACAATCATTACCGGTTTAAAAGTAATTTGGATCGTCACAAGCGGTTGCACTTGAGAGAATctgaaaataattttcaatgCAAACATTGTGAGAAGAAACTTTCAAGTGATTCGGATTTTAGAATTCACCTTAGAACACATGTTGGCCAAGGGCCTTTTAAATGTGATATATGTCACAAGGGTTTTCACTCTAGCAGCTATTTAAAATCTCACAAAATCAAACACACGGGGGAAGCTGGAAAAGTTCATAGTTGTGAATATTgtgataaaaaattttttcttagAGCTGAATTAATAACTCATATACATATTCACACCGACAAGTTACCTTATAGATGTGATACGTGCCGTAAACGTTTTCAAACTGCGGAAAGACTTACTAATCACAAAAAGAGTCATATCGGACAAGTTAAACGGATTTTTAATTGTGAACATTGTGATAAGAAATTTAAAGACAGTTCTAATTTTAAAGTCCATTTACGTATTCACACTGGCGAAAAACCCTATAAATGTGAGATATGTCACAAATGTTTTGCATATTGGGGAAGTTTAGTTGCTCACAAAAAGAGTCACATGAGACCATCTAAAAATGCTGAAGTCGAATGTGAAATATGTCACAAACGTTTAAAAAGACAAAGTCTAAACAATCACAGAAAGCTACATATGAGAGAATCTGGAAAAATTCACAATTGTCAACATTGTGGAAAGAAATTTTTTGATCAATATAGTTTAAAAGCCCACACAAAACTCCATACTAGTGTAAAACTTTTTGAATGTGAATATTGTGAAAAGAAATTTTTACTTGATTCTTATTTAAAAGCACACATTAAGAGACATACTGGCGAAAAACCTTATAAATGTGATGTTTGTCACAAACAATTTACATCTCAAAGCTATTCAGTTCAACACAAAAAATTACATATGGGAGAATCGGCAAAAATTTACAACTGTCAACAGTGTGATAAAAAGTTCATACGTCCGTATGAATTAAAGCAACACGTGATGATTCATACTGGAGAAAAACCATTTGAATGTGATATATGTCACAATCGTTACCGTTGTAAACTTGGTTTGGATCGTCACAAGCCGTTGCATTTGAGAGAATctgaaaataattttcaatgcaaacattgtgaaaagaaatttttaagtGATGAGAATTTAAGAATTCACCTTAGAACACATGTTGGCAAAGGCTCTTTTAAATGTGATATATGTCACAAAGGTTTTCACACTAGcaactatttaaaatatcaCAAAATCAAACATACGGGGGAAGCTGGAAGAGTTCACAGTTGTGAATATTGTGATAAGAAATTTTTTCTTAGAGCTGAATTAATAACTCATGTACATACTCACACCAACGTATTATCTTATAAATGTAATATATGCTATATAAGTTTTCAAACTCCTGAAAGGCTTAGTAATCACAAAAAGAGACGACATATCGGACCAAATAAACGGACTTTTAATTGTGAATATTGTGATAAGAAATTTAAACGTAGTTGTTATCTTACAGTCCATTTACGTATTCATACTGGCGAAAAACCGTATAAATGTGAGATATGTCACAAATGTTTTCCGTATAGGAGAAGTATAATTGCTCACAAAGAGACACATACAAGAGATGCggaaaaaactttaaaatgtGAATATTGTAATAAAAGATTTAAACGAAATCTACAGCTGCGGAGGCACATGAAACCATCTAAGAATGCTGAAGTCGAATGTGAAATATGTCACAAACGTTTAAAAAGGCGAAGTCTAAACAAACACAGAAAGATACATATGGGAGAATCTGCAAAAGTTCACAATTGTCAATATTGTGGAATGAAATTTGTATATGGTTCTCTCTTAAAAGCACACATTAACACACATACTGGCGAAAACCTTTATAAATGTGATGTTTGTGACAAACATTTTATATTTCAAAACAGTTTAACTCATCACAAAAAATTGCATATGGGAGAATTGGCAAAAATTCACAACTGTCAACAGTGTGATATGAAGTTTATACGTCCTTGTGAGTTAAAGCAACACGTGAGGATTCATACTGGAGAAAAAACATTTGAATGTGATATATGTCAAAATCGTTATCGGTCTAAAAAGGGTTTGGATCAACACAATCAGTTGCATTTGAGAGAATctgaaaataattttcaatgCAATCATTGTGAAAAGAAATTTTCAAGTGATTCGAATTTAAGAATTCACTGTAGAACACATATTGGCAAAGGGCCTTTCAAATGTGATATATGTCACAAAGGTTTTCACTCTAACAACTATTTAAAATGTCACAAAATCAGACATACGGGGGAAGCTGGAAGAGTTCATAGTTGTGAATATTGTGATAAGAAATTTTTTCTTAGAGCTGAATTAAGAATGCATATGTATATTCACACCGGCGAATTGCCTTATAAATGTAATATATGCTATATAAGTTTTAGAACTTCTGAAAGACTTAGTAATCACAAAAAGAAACAACATATCGGACCAAATAAACAGACTTTTAATTGTGAATATTGTGATAAGAAATGTTACAATAGTTCTCGGCTTAAATCCCATTTACGTACTCACACTGGCGAAAAACCCTATAAATGTGATATATGTCACAAAGGTTTTGCATTTAGTGGAAATTTAGTTGCTCACAAAAAGACACATACAAGCGATGcggagaaaaatttaaaatgtgaATATTGCGATAAAAGATTTAAACAAAATGTACAGCTGCGGAGACACCTGAAACCATCTAAAAATGCTGAAGTCGAATGTGAAATATGTCACAGGCGTTTAAAGAGGCGAAGTCTATACAATCACAGAAAAATACATATGGGAGAATCGGCAAAAATTCACAACTGTCAAAAGTGTGATATGAAGTTTATACGTCCTTGTGATCTAAAGCAACACATGACGATTCATACTGGAGAAAAACCATTTGCATGTGATATATGTCACTATCGTTACCGGTCTAAAAAGGGTTTGGATCGTCACAAGGAGTTGCATTTGAGAGAATCTGAAAAGAATTTTCAATGCAAACATTGTGAAAAGAAATTTTCAAGTGATGAGATATTAAGAAATCACCTTAGAACACATGCTGGCGAAGGGCCTTTTAAATGTGATATATGTCACAAACGTTTTTACACTAGcaactatttaaaatctcaCAAAATCAGACATACGGAGGAAGCTGGAAGAGTTCATAGTTGTGAATATTgtgataaaaaattttttcttagAAGTGAATTAACAATTCATATACATATTCATACCGGCGAATTGTCTTATAAATGTGATATATGCGATCAACGTTTTCGAACTGCGGAAAGACTTAGTAATCACCAAAAGAGACGACATATCGGACAAGTAAAGCGGATTTTTAATTGTGAACATTGTGATAAGAAATGTAAACGTAGTTCTGATCTTAAAGCCCATTTACGTACTCACACTGGTGAAAAACCCTATAAATGTGAGATATGTCACAAACGTTTTGCGCGTAGTGGAAATTTAATTGCTCACAAAAAGACACATACAAGAGATGCGGGAAAAACTTTGAAATGTAAATGTTGTGATAAAAGATTTAAACAAAATCGAGAGCTTCGGAGTCACATAAAACCATCTGAAAATGCTGAAGTCGAATGTGAAATATGTCACAAACGTTTAAAAAGGCGAAGTCTATACCATCACAGAAAGATACATATTGGAGAATCTGCAAAAATTCACAATTGCCAACATTGTGAAAAGAAATTTTTCGATCGTTCTCAGTTAAAAGCCCACACAAAACTCCATACTGGTGGAAAACTTTTTGAATGCGAATATTGTGAAAAGAAGTTTGTATATGTTTCTCAGTTAGAAGCACACATTAACAAACATACTGGCGAAAAACCTAATAAATGTGATGTTTGTCCCAAATCTTTTACATCTCAAAGCGCTTTAATTCAGCACAAAAAATTGCATGGCGGAGAATCGGCAAAAATTTACAACTGTCAACAGTGTGATAAGAAGTTTATGCGCCCTTTTTATTTAAAGCAACACCTGATGGTTCATTCTGGAGAAAAACCATTTGAATGTGATATATGTCACAATCGTTACGGTTATAAAAAGACTTTGGATGATCACAAGCATTGGCATTTGAAAGAATGCAAATATTGTAAAAAGAAACTTTCAAGTGATGAGAATTTAAGAATTCACCTTAGAACACATATTGGCGAAGGACCTTTTAAATGTGATATATGTCACAAAGGTTTTCGCACTAACGGCTATTTAAAATCTCACAAAATCAGACATGCCGAGGAAGCTGTAAGAACTCATAATTGTGAACATTGCGATAAGAAATTTTTACGTAAATCTGAATTAATAAGCCACATATATACAGCCAGACACGATTTGCCTCATAAATGTGATATGTGCACTAAACGTTTTCAATCTCTTAAAAAACTCACTGATCACAAAAACAGCCACATCGGACAAAGTGAACGGACTTTTGATTGTGAACATTGTGAGAAAAAATTTACACGTAGTTCTGGTCTTAAAGGTCACTTGCGTACTCACACTGGCGAAAAACCCTATAAATGTCAGATATGCCAGAAACATTTTGCACATAGTGGAAATTTTGCTAGTCATAAAAAGACGCATATGGGCGATGCAGCAAAAACCTTAAAATGTGAACATTGCGATAAAAGATTTATACGAAGTCTAAGTCTTAAGATTCACATGACACCATCTGAAAATGCTGAAGTCGAATGTGAAATATGTTACAAACGTTTAAAAAGGCGAAGTCTATACAATCACAGAAAGCTACATATGAGAGAATCTGCAAAAATTCACAATTGTCAACATTGTGGAAAGAAATTTTTAGATCATTATAGTTTAAAAACTCACATAAAATACCATACTAGTGTAAAACTTTTTGAATGTGAATATTGTGAAAAGAAATTTTTACTTCGTTCTTATTTAAAAGCACACACTAAGACACATATTGGCGAAAAACCTTATACATGTGATGTTTGTCACAATCATTTTGCATCTCATAGAAGTTTAACTCAGCACAAAAAATTGCATATGGGAGAAGCGGCAAAAATTTACAACTGTCAACAGTGTGATATGAAGTTTATACGTCCATCTCAATTAAAGCTACACCTGATAGTTCATACTGGAGAAAAACCATTTGAATGTGATATATGTCACAATCGTTACGGTTATAAAAAGAGTTTGGATGATCACAAGAAGTTGCATTTGAGAGAATGCAAATATTGTGAGAAGAAAATTTCAAGTGATGAGAATTTAAGAATTCACCTTAGAACACATATTGGCGAAGGACCTTTTAAATGTGATATATGTCACAAACGTTTTCGCAATAGCAGCTATTTAAAATCTCACAAAGTCAGACATACCGAAGAAGCTGTAAGAACTCATAATTCTGAATATTGTGATAAGAAATTTTTACGTAAATCTAAATTAATAAGTCACATACATACCGCCAGACACGATTTGCCTCATAAATGTGATATGTGCAATAAACGTTTTCAAACTCTTGAAATACTTAGTGATCACAAAAAGAGCCACATCGGACAAGGTGAACGGATTTTTGATTGTGAACATTGTGAGAAAAAATTCAAACGTAGTTCTGGTCTTAAAGTCCACTTACGTACTCACACTGGCGAAAAACCCTATAAATGTCAGATATGTCAGAGACGTTTTGCAGACAATGCTAATTTAGCTAATCACATAAAGACGCATATGGGCGATGCAGCAAAACCTATAAAATGTGAATATTGTGATAAAAGATTTATACGAAATCTAGAGCTTCGGAGTCACATGAGAGTACATACTAAAGAAAACCCCAAACTATCATAA
Protein Sequence
MGESAKIYNCQQCDKKFMRPYELKLHVRIYTGEKPFECDVCHNHYRFKSNLDRHKRLHLRESENNFQCKHCEKKLSSDSDFRIHLRTHVGQGPFKCDICHKGFHSSSYLKSHKIKHTGEAGKVHSCEYCDKKFFLRAELITHIHIHTDKLPYRCDTCRKRFQTAERLTNHKKSHIGQVKRIFNCEHCDKKFKDSSNFKVHLRIHTGEKPYKCEICHKCFAYWGSLVAHKKSHMRPSKNAEVECEICHKRLKRQSLNNHRKLHMRESGKIHNCQHCGKKFFDQYSLKAHTKLHTSVKLFECEYCEKKFLLDSYLKAHIKRHTGEKPYKCDVCHKQFTSQSYSVQHKKLHMGESAKIYNCQQCDKKFIRPYELKQHVMIHTGEKPFECDICHNRYRCKLGLDRHKPLHLRESENNFQCKHCEKKFLSDENLRIHLRTHVGKGSFKCDICHKGFHTSNYLKYHKIKHTGEAGRVHSCEYCDKKFFLRAELITHVHTHTNVLSYKCNICYISFQTPERLSNHKKRRHIGPNKRTFNCEYCDKKFKRSCYLTVHLRIHTGEKPYKCEICHKCFPYRRSIIAHKETHTRDAEKTLKCEYCNKRFKRNLQLRRHMKPSKNAEVECEICHKRLKRRSLNKHRKIHMGESAKVHNCQYCGMKFVYGSLLKAHINTHTGENLYKCDVCDKHFIFQNSLTHHKKLHMGELAKIHNCQQCDMKFIRPCELKQHVRIHTGEKTFECDICQNRYRSKKGLDQHNQLHLRESENNFQCNHCEKKFSSDSNLRIHCRTHIGKGPFKCDICHKGFHSNNYLKCHKIRHTGEAGRVHSCEYCDKKFFLRAELRMHMYIHTGELPYKCNICYISFRTSERLSNHKKKQHIGPNKQTFNCEYCDKKCYNSSRLKSHLRTHTGEKPYKCDICHKGFAFSGNLVAHKKTHTSDAEKNLKCEYCDKRFKQNVQLRRHLKPSKNAEVECEICHRRLKRRSLYNHRKIHMGESAKIHNCQKCDMKFIRPCDLKQHMTIHTGEKPFACDICHYRYRSKKGLDRHKELHLRESEKNFQCKHCEKKFSSDEILRNHLRTHAGEGPFKCDICHKRFYTSNYLKSHKIRHTEEAGRVHSCEYCDKKFFLRSELTIHIHIHTGELSYKCDICDQRFRTAERLSNHQKRRHIGQVKRIFNCEHCDKKCKRSSDLKAHLRTHTGEKPYKCEICHKRFARSGNLIAHKKTHTRDAGKTLKCKCCDKRFKQNRELRSHIKPSENAEVECEICHKRLKRRSLYHHRKIHIGESAKIHNCQHCEKKFFDRSQLKAHTKLHTGGKLFECEYCEKKFVYVSQLEAHINKHTGEKPNKCDVCPKSFTSQSALIQHKKLHGGESAKIYNCQQCDKKFMRPFYLKQHLMVHSGEKPFECDICHNRYGYKKTLDDHKHWHLKECKYCKKKLSSDENLRIHLRTHIGEGPFKCDICHKGFRTNGYLKSHKIRHAEEAVRTHNCEHCDKKFLRKSELISHIYTARHDLPHKCDMCTKRFQSLKKLTDHKNSHIGQSERTFDCEHCEKKFTRSSGLKGHLRTHTGEKPYKCQICQKHFAHSGNFASHKKTHMGDAAKTLKCEHCDKRFIRSLSLKIHMTPSENAEVECEICYKRLKRRSLYNHRKLHMRESAKIHNCQHCGKKFLDHYSLKTHIKYHTSVKLFECEYCEKKFLLRSYLKAHTKTHIGEKPYTCDVCHNHFASHRSLTQHKKLHMGEAAKIYNCQQCDMKFIRPSQLKLHLIVHTGEKPFECDICHNRYGYKKSLDDHKKLHLRECKYCEKKISSDENLRIHLRTHIGEGPFKCDICHKRFRNSSYLKSHKVRHTEEAVRTHNSEYCDKKFLRKSKLISHIHTARHDLPHKCDMCNKRFQTLEILSDHKKSHIGQGERIFDCEHCEKKFKRSSGLKVHLRTHTGEKPYKCQICQRRFADNANLANHIKTHMGDAAKPIKCEYCDKRFIRNLELRSHMRVHTKENPKLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-