Lobt019171.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucophora obtusa
Gene Symbol
Zbtb41
Assembly
GCA_949987735.1
Location
OX465296.1:19219335-19239248[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 61 2.6e-05 0.0028 19.8 4.0 2 23 9 30 8 30 0.97
2 61 0.0032 0.34 13.2 6.0 1 23 37 59 37 59 0.98
3 61 0.00044 0.046 15.9 2.3 1 23 65 87 65 87 0.97
4 61 0.0038 0.4 13.0 0.9 1 23 94 116 94 116 0.98
5 61 4.3e-06 0.00045 22.2 2.1 1 20 124 143 124 145 0.95
6 61 1.6e-06 0.00016 23.6 1.9 3 23 157 177 156 177 0.97
7 61 0.24 25 7.3 4.5 2 23 184 205 183 205 0.95
8 61 0.00016 0.017 17.3 3.1 2 23 214 235 213 235 0.97
9 61 0.0033 0.35 13.1 5.1 1 23 242 264 242 264 0.97
10 61 9.8e-06 0.001 21.1 3.1 1 23 270 292 270 292 0.98
11 61 0.039 4.1 9.8 0.4 1 23 318 340 318 340 0.97
12 61 2.3e-05 0.0024 19.9 3.3 1 23 352 374 352 374 0.98
13 61 0.00014 0.015 17.5 2.0 1 23 380 402 380 402 0.98
14 61 1.8e-05 0.0019 20.2 0.8 2 21 411 430 410 430 0.97
15 61 1.6e-06 0.00016 23.6 1.9 3 23 442 462 441 462 0.97
16 61 0.019 2 10.7 4.0 1 23 468 490 468 490 0.98
17 61 2.2e-06 0.00023 23.1 1.6 1 23 498 520 498 520 0.99
18 61 0.0058 0.61 12.4 6.3 1 23 527 549 527 549 0.98
19 61 0.0051 0.54 12.6 5.4 1 23 555 577 555 577 0.97
20 61 4.6e-05 0.0049 19.0 5.3 2 23 585 606 584 606 0.97
21 61 0.00052 0.055 15.7 0.6 1 23 613 635 613 635 0.98
22 61 1.3e-06 0.00013 23.9 4.5 1 23 643 665 643 665 0.99
23 61 0.0002 0.021 17.0 4.4 1 23 678 700 678 700 0.97
24 61 0.024 2.6 10.4 1.7 1 23 708 730 708 730 0.97
25 61 1.2e-05 0.0012 20.9 0.6 1 23 742 764 742 764 0.98
26 61 0.00065 0.069 15.4 5.3 1 23 770 792 770 792 0.98
27 61 1.8e-05 0.0019 20.2 0.8 2 21 801 820 800 820 0.97
28 61 1.6e-06 0.00016 23.6 1.9 3 23 832 852 831 852 0.97
29 61 0.00014 0.015 17.4 1.9 1 23 858 880 858 880 0.98
30 61 0.00023 0.025 16.8 2.4 1 23 888 910 888 910 0.99
31 61 0.0012 0.13 14.5 2.8 1 23 917 939 917 939 0.98
32 61 0.0027 0.28 13.4 2.2 1 23 945 967 945 967 0.97
33 61 2.4e-05 0.0025 19.9 3.2 1 23 991 1013 991 1013 0.98
34 61 0.024 2.6 10.4 1.7 1 23 1021 1043 1021 1043 0.97
35 61 0.00024 0.026 16.7 1.1 1 23 1055 1077 1055 1077 0.98
36 61 3.3e-05 0.0035 19.4 4.2 1 23 1083 1105 1083 1105 0.98
37 61 1.8e-05 0.0019 20.2 0.8 2 21 1114 1133 1113 1133 0.97
38 61 1.6e-06 0.00016 23.6 1.9 3 23 1145 1165 1144 1165 0.97
39 61 0.0019 0.21 13.9 4.9 1 23 1171 1193 1171 1193 0.98
40 61 1.3e-05 0.0013 20.8 2.6 1 23 1201 1223 1201 1223 0.99
41 61 0.0021 0.23 13.8 3.0 1 23 1230 1252 1230 1252 0.98
42 61 0.00025 0.027 16.7 3.0 1 23 1258 1280 1258 1280 0.97
43 61 0.0017 0.18 14.1 1.1 1 23 1286 1308 1286 1308 0.98
44 61 1.5e-05 0.0015 20.6 3.9 1 23 1316 1339 1316 1339 0.97
45 61 4.5e-05 0.0048 19.0 3.5 1 23 1355 1377 1355 1377 0.98
46 61 0.0053 0.56 12.5 3.4 1 23 1385 1407 1385 1407 0.99
47 61 0.00016 0.016 17.3 6.6 1 23 1419 1441 1419 1441 0.98
48 61 1.6e-05 0.0017 20.5 5.7 1 23 1447 1469 1447 1469 0.98
49 61 2.1e-05 0.0022 20.1 3.8 2 21 1478 1497 1477 1497 0.97
50 61 2.5 2.7e+02 4.1 2.0 2 23 1505 1525 1504 1525 0.86
51 61 0.0012 0.13 14.5 2.5 1 23 1533 1555 1533 1555 0.98
52 61 0.043 4.5 9.7 5.7 1 23 1561 1583 1561 1583 0.98
53 61 0.003 0.31 13.3 5.8 1 23 1591 1613 1591 1613 0.99
54 61 0.013 1.4 11.3 3.1 1 23 1619 1641 1619 1641 0.97
55 61 0.0076 0.8 12.0 1.1 1 23 1649 1671 1649 1671 0.98
56 61 0.045 4.7 9.6 4.3 1 23 1677 1699 1677 1699 0.98
57 61 0.36 38 6.8 7.9 1 23 1707 1729 1707 1729 0.97
58 61 6.9e-05 0.0074 18.4 1.7 1 23 1735 1757 1735 1757 0.98
59 61 0.05 5.3 9.4 6.1 1 23 1763 1785 1763 1785 0.98
60 61 6.6e-05 0.007 18.5 1.2 1 23 1793 1815 1793 1815 0.98
61 61 0.0048 0.51 12.6 3.3 1 23 1821 1843 1821 1843 0.98

Sequence Information

Coding Sequence
ATGGGCGAAAGAGGAAAACCTCTCCAGTGCACACATTGTGATAAAAGATTCAAACGAAATGCTGATCGTCGGAATCACATGAGAGTACATTTTGAAGTTGAAAAAAAACATAAGTGTGAATATTGTGATAAGAAATTTTTTCTTAAACATGAATTAACAGCCCACACTCTTCGTCACACCTCCGTAACATCTTATAATTGTGAACATTGTGATAGTAAATTTAAAAGTAGATCTGGTTTAAAAGCCCACTTATATATTCACACCACTGGCGAAAAACCCTATGAATGTGAGATATGTCAGAAACGTTTTGGATATATGGGTTATTTTAATGTTCACAAAAAGATACATATGGGCGATGCAGGAAAAACTTTTCAGTGTAAACATTGTGATAAACGTTTCACAACAAATACTAATCTGCGGATTCATATCAGTAATCCATCTACCGGGGAAGCTGAAAGAGTTAATAATTGTGAATACTGTGataagaaatttaaaacaaaatctTATCTTAAAATCCACTTACGTATTCACACTGGCGAAAAACCCTGTGAATGTGATATATGTCATAAACGTTTTGGAAACCACGGAATTTTGAATGCTCACAAAAAGATACATATGGGCGAAGCAGAAAAACCTTTGCAGTGCACACATTGTGATAAAAGATTCACACGAGATGCTGAACGTCGGAATCACATGAGAGTACATTGTGAAGTTGAAAAAAAACATAAGTGTGAATATTGTGATAAGAAATTTTTTCTTAAACATGAATTAACAGTCCACACTCTTATTCACACCTCCGTAGCATCTTATAAATGTGAACATTGTGATAGGAAATTTAAAAGTAGATCTGGTTTAAAAGCCCACTTATATATTCACACTTCTGGCGAAAAACCCTATGAATCTACCTTAACAACCCACACTCTTCGTCATACCTTAGCAGTCCATATGGCTTATAAATGTGTTACATGCTCTGAAGGTTTTCCTACTCTCGAAAGCCTTAGTTATCACAAAAAAGCACATATGAAACAAAGTAATAAAAAAGTTGAACTAAGATTTAATTGTAAACATTGTgataagaaatttaaaaaaagtggTGGTCTTACAGAACATTTACGTGTCCACACTGGCGAAAAACCCTATGAATGTGAGATATGTCACAAGTGTTTTGGAAGTGGTGGAAATTTGAATGCTCACAAAAAGATACATATGGGCGATGcagcaaaaaataaaaaatgtcagTATTGTGATAAAGGATTTAAACGAAATTCAGAACTTTGGATGCACATGAGGCCATCTACCGGGGAAGCTGAAAGAGTTAATAATTGTGAATACTGTGataagaaatttaaaacaaaatctTATCTTAAAATCCACTTACGTATTCACACTGGCGAAAAACCCTATGAATGTGATATATGTCATAAACGTTTTGGAACCCACGGAAAGTTTGATGTTCACAAAAAGATACATATGGGCGAAACAGAAAAACGTTTCCAGTGTGAATATTGTGATAAAAGATTCAGACGAAATGCTGATCGTCGGGTTCACATGAGAGTACATTGTGAAGTTGAAAAAAAACATAAGTGTGAATATTGTGATAAGAAATTTTTTCTTAAACATGAATTAACAGTCCACACTCTTCGTCACACCTCCGTAACATCTTATAAATGTGATATATGCTATAAACATTTTCCTACTTCTGAAAAACTTTGTAATCACAAAAACGGACATAAAAAAGTTGAAGAAATTAATAAATGTGAACACTGTGATAAGAAATTTAAACATAGTTCTAGTCTTAAAGCCCACTTATATATTCACACCACTGGCGAAAAACCCTATGAATGTGAAATATGTCAGAAACGTTTTGAATATATTGGAAATTTTAATGTGCACAAAAAGATACATATGGGCGATGCAGGAAAAACTTTTCAGTGTAAACATTGTGATAAAAGTTTCATAACAAATTCTAAACTTCAAAGCCATATAAAGAGTCatgataaaaaagaaattaaaaaaattcgtAACTCTGAATATAACTGTGAATATTgtaataagaaattttttcgTAAAGCTAACTTAACAACCCACACTTTTCGTCATACCTTAGAAATCTATATGGCTTATAAATGTGATATATGCTCTGAAGGTTTTCATACTCTTGAAAGCCTTAGTTATCACAAAAAAGCACATATAAAACAAAGTAATACAAAAGTTGAACCAAGATTTAATTGTGAATATTGTgataagaaatttaaaaaaagtgctGGTCTTATAGAACACTTACGTGTCCACACTGGCGAAAAACCCTATGAATGTGAGATATGTCACAAATGTTTTAAAAGTGGTGGGAATTTTAATACTCACAAAAAGATACATATGGGCGATGcagcaaaaaataaaaaatgtcaataTTGTGATAAAGGATTTAAACGAAATTCGGAACTTTGGATGCACATGAGGCCATCTACCGGGGAAGCTGAAAGAGTTAATAATTGTGAATACTGTGataagaaatttaaaacaaaatctTATCTTAAAATTCACTTACGTATTCACACTGGCGAAAAACCCTATGAATGTGATATATGTCAGAAACGTTTTGGAAACCACGGAAATTTTAATGCTCACAAAAAGATACATATGGGCGAAACAGAAAAACGTTTCCAGTGTGCACATTGTGATAGAAGATTCCAACGAAATGCTGATCGTCGGATTCACATGAGAGTACATAGTGAAGTTGAAAAAAAACACAAGTGTGAATATTGTGATAAGAAATTTTTTCTTAAACCTGAATTAACAGCCCACACTCTTCGTCACACCTCCGTAACATCTTATAAATGTGATATATGCTATAAACATTTTCCTACTCCTGAAAGACTTAGTAATCACAAAAAGGGACATATGAGACAAAGTAATAAAAAAGTTGaagaaattattaattgtgaaaataaaaaaaatcgtaacTCTGAATATAACTGTGAATATTGTAATAAGAAATTTTCTCTTAAATCTAACTTAACAACCCACACTCTTCGTCATACCTTAGCAATCTATATGGCTTATAAATGTGATATATGCTCTGAAGGTTTTCACACTCTTGAAAGCCTTAGTTATCACAAAAAGGCACATATGAAACAAAGTAATAAAAAAGTGGAACGAAGATTTAATTGTGAACATTGTgataagaaatttaaaaaaggtGGTGGTCTTATAGAACACTTACGTGTCCACACTGGCGAAAAACCCTATGAATGTGAGATATGTCACAAATGTTTTGGAAATCGTACAAATTTGAATGCTCACAAAAAGATACATATGGGCGATGcagcaaaaaataaaaagtgtcAATATTGTGATAAAGGATTTAAACGAAATTCGGAACTTTGGATGCACATGAGGCCATCTACTGGGGAAGCTGAAAGAGTTAATAATTGTGAATATTGTGataagaaatttaaaacaaaatctTATCTTAAAATTCACTTACGTATTCACACTGGCGAAAAACCCTATGAATGTGATATATGTCAGAAACGTTTTGGAAACCACGGACATTTTAATACTCACAAAAAGATACATATGAGCGAAACAGAAAAACCTTTCCAGTGTGCACATTGTGATAAAAGATTCACACGAAATGCTGATCGTCGGATTCACATGAGAGTACATAGTGAAGTTGAAAAAAAACATAAGTGTGAATATTGTGATAAGAAATTTTTTCTTAAACCTGAATTAACAGTCCACACTCTTCGTCACACCTCCGTAACATCTTATAATTGTGAACATTGTGAtaggaaatttaaaaatatatctaCTTTAAAAGACCACTTATATATTCACACTGGCGAAAAACCCTATGAATGTGAGATATGTCAGAAACGTTTTGGATATATTCGAAATTTTAATGTGCACAAGAAGATACATATGGGAGATGCAGGAAAAACTTTTCAGTGTAAACATTGTGATAAAAGTTTCATAACAAATGCTAAACTTCGGAGTCATATCAGTCGTaaacatgataaaaaaaaaattaaaaaaattaaaaaaattcgtAACTCTGAATATAACTGTGAATATTGTAATAAGAAGTTTTTTCGTAAAGCTAACTTAACAACCCACACTCTTCGTCATACCTTAGCAGTCCATATGGGTTATAAATGTGATAAATGCTCTGAAGGTTTTCATACTCTTGAAAGCCTTAGTAATCACAAAAAAACACATTTGAAACAAAGTAATAAAAAAGTTGAACGAAGATTTAATTGTAAACATTGTGataagaaatttaaaagaagTTGTGGTCTTACAGAACATTTACGTGTCCACACTGGCGAAAAACCCTTTGAATGTGAGATATGTCACAAATGTTTTAGAAATCGTACAAATTTGAATGCTCACAAAAAGATACATATGGGCGATGcagcaaaaaataaaaaatgtcaataTTGTGATAAAGGATTTAAACGAAATTCGGAACTTTGTAGGCACATGAGGCCATCTACACATGATGAAATCGAATGTGAAATATGCCATAAACGTCTAAAAAGTCGAAGCATGAGTATTCACAGAAAATCACATATGGGAGAATCTGCAAAAATTTACAATTGTCAACATTGTGATATGAGATTTTTACTTCGTTCTCAATTAAAAGCTCACATGAGGGTCCATACGGGGGAAAAGCCTTTTGAATGTGATATATGCCACAAACATTTCCGCTTTAGAAACACTATAAATGTTCACAAAAAGATACACTTGGGAGATTCTGCAAAACGTTTTCAATGCGAACATTGCGAAAAgaaatttttgcgtttttttcaattaaaaaccCACATTAGAACACATACTGGCGAAAAACCTTATGAATGTGATATTTGTCACAAACGTTTCCCGTTTCAAAACGGTTTCAGTTATCACAGACAATTGCATATGGGAGAAACTggaaaaaaatacaattgtgAACATTGTGGCATGAAATTTTTACGTAATTTTGATTTACTAATACACGCACGCGTGCATACTGGCGAACCACGCTTTAAATGTGATGTATGCCACAAAGTTTGCTTATCTAAATCGGGGCTTAATGATCATAGACTAAGACATATGGGGGAAGCTGGAAAAATGTATAATTGTGAACATTGTAGTAAAAAATTCTTTTGCAGCAGTCATCTAAAATCCCACATCGTTGTACATACAGGCGAGAAACCATTTGAATGTGATATGTGTGATAAGAAATTTAATCGTAGCATTTACCTAAGTACCCACAAACGTATTCATACTGAAGAAAAGCCCTTTGAATGTGATGTATGCCACAAACACTTCAGGGCTAATCAAAATTTCCTTCTTCACAAAAAGCGACACTTGGGAGAAGCTGGAAGATCTTATAGTTGTAAAGATTGTGACAAGAAATATTTTCGTAAAATGGATTTAGATGCACACCTACGTATTCATACTGGCGAAAAGCCTTTTGAATGTGATATATGCCATAAACGTTTCGGTGCCAGCCAATATTTAACTTCACACAAAAAAAGGCATTTGAATCAAGcatcaaaaactttaaattaa
Protein Sequence
MGERGKPLQCTHCDKRFKRNADRRNHMRVHFEVEKKHKCEYCDKKFFLKHELTAHTLRHTSVTSYNCEHCDSKFKSRSGLKAHLYIHTTGEKPYECEICQKRFGYMGYFNVHKKIHMGDAGKTFQCKHCDKRFTTNTNLRIHISNPSTGEAERVNNCEYCDKKFKTKSYLKIHLRIHTGEKPCECDICHKRFGNHGILNAHKKIHMGEAEKPLQCTHCDKRFTRDAERRNHMRVHCEVEKKHKCEYCDKKFFLKHELTVHTLIHTSVASYKCEHCDRKFKSRSGLKAHLYIHTSGEKPYESTLTTHTLRHTLAVHMAYKCVTCSEGFPTLESLSYHKKAHMKQSNKKVELRFNCKHCDKKFKKSGGLTEHLRVHTGEKPYECEICHKCFGSGGNLNAHKKIHMGDAAKNKKCQYCDKGFKRNSELWMHMRPSTGEAERVNNCEYCDKKFKTKSYLKIHLRIHTGEKPYECDICHKRFGTHGKFDVHKKIHMGETEKRFQCEYCDKRFRRNADRRVHMRVHCEVEKKHKCEYCDKKFFLKHELTVHTLRHTSVTSYKCDICYKHFPTSEKLCNHKNGHKKVEEINKCEHCDKKFKHSSSLKAHLYIHTTGEKPYECEICQKRFEYIGNFNVHKKIHMGDAGKTFQCKHCDKSFITNSKLQSHIKSHDKKEIKKIRNSEYNCEYCNKKFFRKANLTTHTFRHTLEIYMAYKCDICSEGFHTLESLSYHKKAHIKQSNTKVEPRFNCEYCDKKFKKSAGLIEHLRVHTGEKPYECEICHKCFKSGGNFNTHKKIHMGDAAKNKKCQYCDKGFKRNSELWMHMRPSTGEAERVNNCEYCDKKFKTKSYLKIHLRIHTGEKPYECDICQKRFGNHGNFNAHKKIHMGETEKRFQCAHCDRRFQRNADRRIHMRVHSEVEKKHKCEYCDKKFFLKPELTAHTLRHTSVTSYKCDICYKHFPTPERLSNHKKGHMRQSNKKVEEIINCENKKNRNSEYNCEYCNKKFSLKSNLTTHTLRHTLAIYMAYKCDICSEGFHTLESLSYHKKAHMKQSNKKVERRFNCEHCDKKFKKGGGLIEHLRVHTGEKPYECEICHKCFGNRTNLNAHKKIHMGDAAKNKKCQYCDKGFKRNSELWMHMRPSTGEAERVNNCEYCDKKFKTKSYLKIHLRIHTGEKPYECDICQKRFGNHGHFNTHKKIHMSETEKPFQCAHCDKRFTRNADRRIHMRVHSEVEKKHKCEYCDKKFFLKPELTVHTLRHTSVTSYNCEHCDRKFKNISTLKDHLYIHTGEKPYECEICQKRFGYIRNFNVHKKIHMGDAGKTFQCKHCDKSFITNAKLRSHISRKHDKKKIKKIKKIRNSEYNCEYCNKKFFRKANLTTHTLRHTLAVHMGYKCDKCSEGFHTLESLSNHKKTHLKQSNKKVERRFNCKHCDKKFKRSCGLTEHLRVHTGEKPFECEICHKCFRNRTNLNAHKKIHMGDAAKNKKCQYCDKGFKRNSELCRHMRPSTHDEIECEICHKRLKSRSMSIHRKSHMGESAKIYNCQHCDMRFLLRSQLKAHMRVHTGEKPFECDICHKHFRFRNTINVHKKIHLGDSAKRFQCEHCEKKFLRFFQLKTHIRTHTGEKPYECDICHKRFPFQNGFSYHRQLHMGETGKKYNCEHCGMKFLRNFDLLIHARVHTGEPRFKCDVCHKVCLSKSGLNDHRLRHMGEAGKMYNCEHCSKKFFCSSHLKSHIVVHTGEKPFECDMCDKKFNRSIYLSTHKRIHTEEKPFECDVCHKHFRANQNFLLHKKRHLGEAGRSYSCKDCDKKYFRKMDLDAHLRIHTGEKPFECDICHKRFGASQYLTSHKKRHLNQASKTLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-