Lobt033722.1
Basic Information
- Insect
- Leucophora obtusa
- Gene Symbol
- DNAJC2
- Assembly
- GCA_949987735.1
- Location
- OX465297.1:70303004-70304019[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-07 0.00068 21.5 0.0 4 38 9 46 6 47 0.93 2 2 1.5e-08 5.6e-05 24.9 0.2 9 43 106 141 94 143 0.74
Sequence Information
- Coding Sequence
- atgGCTTCTTTAAGCGGTGGTTTTTGGACAGATGAAGATTTAGCTGAACTTATTCGTCTAGTTAAAAAACATCCCGCCGGATTAAGTAATCGTTGGATTACAATCGCTGAAACAATGAATCGTACCGTCCAAGAAGTAACATTTATGGCAGCCAAAATGAAAGAAAATGGTTATCGTATACCTGGCCAAACCGACAGTGTGGCCGAAATTATTGCACAGGAATCGCAAGAAATCGTTAAgaaagaaaaaactaaaaaggAAACGAACATTGTCATACCCGAAACAAACTGGAGACAAGATCAACAAAAGGCTTTGGAAGCAGCTATTGTTAAATATAGAAAAACAGCTGGTAGTGATAGGTGGCAAAAGATAGCCAATTGTGTTCCCGATAAAACAAAAGAAGAATGTTTGGTACGGTATAAGTATCTCTGTGAATTAGTGAAATCTCAGAAACAAAACGAAGAATCGGAAGGAAATGAAATAAATACAGAACTGGCTTCTAAAATGAAAACTTTAGGTGAGGCAGCACAACAAAAATCCGAAGATCTGCTGTCTCAGGAGTGCAGACCTGTTACAACAGAAGATTTAGCGGGCGAATTACCAGATAAAGGTGATAAAAAACGTAATAAACGTAAAGAAAGGAGAAGGCGGAGAGGTTTTTCTAGCGATGAAGATTCAGATAATGCATACAACTatgaaataaattaa
- Protein Sequence
- MASLSGGFWTDEDLAELIRLVKKHPAGLSNRWITIAETMNRTVQEVTFMAAKMKENGYRIPGQTDSVAEIIAQESQEIVKKEKTKKETNIVIPETNWRQDQQKALEAAIVKYRKTAGSDRWQKIANCVPDKTKEECLVRYKYLCELVKSQKQNEESEGNEINTELASKMKTLGEAAQQKSEDLLSQECRPVTTEDLAGELPDKGDKKRNKRKERRRRRGFSSDEDSDNAYNYEIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -