Lobt035150.1
Basic Information
- Insect
- Leucophora obtusa
- Gene Symbol
- CDC5L
- Assembly
- GCA_949987735.1
- Location
- OX465297.1:103778212-103781756[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8e-17 1.1e-13 52.9 1.7 2 46 9 54 8 54 0.97 2 3 6.9e-09 2.6e-05 26.0 0.1 8 45 66 102 60 103 0.90 3 3 4 1.5e+04 -2.1 0.1 5 18 144 157 141 159 0.84
Sequence Information
- Coding Sequence
- ATGCCACGTATTATGATCAAAGGCGGTGTGTGGCGAAACACCGAGGATGAAATCCTTAAAGCCGCTATTATGAAATATGGAAAAAATCAATGGTCGCGTATTGCTTCAATGCTGCATCGTAAAAGTGCTAAGCAGTGCAGGGCTAGATGGTATGAATGGCTAGATCCCAGTATCAAAAAGACCGAATGGTCTCGTGAAGATGAAAAATTATTACATTTGGCTAAACTTATGCCAACCCAATGGCGTACTATAGCACCTATTATAGGACGTACAGCAGCGCAATGTTTAGAACGTTATGAATATTTATTAGATCAGGCTCAACGTAAAGAAGATGGTGAGGATGCCGCAGATGGTCCTCCAAAATTTACACATGGCGAAATCGATCCAAATCCTGAAACTAAACCAGATAGGCCTGACTCTAAGGATATGGATGAAGATGAACTTGAAATGTTATCTGAAGCACATGCTCGTTTGGCTAATACCCAAGGCAAAAAGGCAAAACGTAAAGCTCGAGAAAAACAATTGGAGGATGCTCGTCGCCTGACGGCTTTACAAAAACGTCGCGAACTTGTAACGATTTGGTTCGGTCTACTACCATGGGAACAGCTACCTATTAATTCCGGCTGTACTCGTCGtAGCGAAATATATCGACATCACAAACTTCGTGCTACTGGCATTGGTAGTGGTAGACCAAAACTTGCTAAAGACATAGATTATAATGTTGAAATCCCATTTGAGAAAATACCTGCTCTGGGTTTTTATGACACCTCTGAAGAGCACATCGATCGAAATGATCCGGATTTCAATAAAATGCGTCAACAAGATTTAGATGGTGAATTACGTTCGGAAAAGGAAGAGTGTGAAAGAAaaaaagataaacaaaaattgaaaCGACGCAAAGAGAATGATATGCCAATGGCTATGTTACAAAATTTGGAACCCGAACGTAAACGTTCTAAACTTGTTTTGCCTATACCACAAATATCCGATCAAGAACTACAACAAGTTGTTAAATTGGGACGTGCCAGTGAAGTGGCCAAAGAAGTAGCAATCGAGAGTGGTATTGAAACAACCGCCGCTCTATTAGCCGATTATTCTATAACACCACAAGCTTCGGCCACACCACGTACGTCAGCTGCTTATACAGATCGTATTATGCAAGAAGCACAAAATATTATGGTTCTTACACATGTAGAGACTCCACTAAAAGGTGACCTACATAATTCGGACTTTTCCAGTACAATACCTAAAGGAGCATCTATAGCAACACCAAATACCGTTATAGCTACCCCATTTAGAACACAACGTGGTACTGAATATGGTATACTAAGAAGTTTTTCCACACCCATGTCTTCGGCTTTAGTTCCTGTGGGTAAAACGCCACGTGCCGATGGATCACAAACCGTagcatttatttatttatttattttgttgttcCACACACAAGACTTAAAGTCTTATATTGCAGTGAAGAACTGA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAIMKYGKNQWSRIASMLHRKSAKQCRARWYEWLDPSIKKTEWSREDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQRKEDGEDAADGPPKFTHGEIDPNPETKPDRPDSKDMDEDELEMLSEAHARLANTQGKKAKRKAREKQLEDARRLTALQKRRELVTIWFGLLPWEQLPINSGCTRRSEIYRHHKLRATGIGSGRPKLAKDIDYNVEIPFEKIPALGFYDTSEEHIDRNDPDFNKMRQQDLDGELRSEKEECERKKDKQKLKRRKENDMPMAMLQNLEPERKRSKLVLPIPQISDQELQQVVKLGRASEVAKEVAIESGIETTAALLADYSITPQASATPRTSAAYTDRIMQEAQNIMVLTHVETPLKGDLHNSDFSSTIPKGASIATPNTVIATPFRTQRGTEYGILRSFSTPMSSALVPVGKTPRADGSQTVAFIYLFILLFHTQDLKSYIAVKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01165465;
- 90% Identity
- -
- 80% Identity
- -