Lobt056125.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucophora obtusa
Gene Symbol
lov
Assembly
GCA_949987735.1
Location
OX465299.1:179525801-179557480[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.1e-18 2e-14 54.7 0.0 1 44 802 845 802 846 0.96

Sequence Information

Coding Sequence
ATGTTAATAGAATCAGAGGAAATCATTAAAAGGCGCAAACTGTCGTTGACGACAGATACGGCCACGTTATACGGTGACTTTGAGCACACACAACAAGCTGCTATACCACCTGGTACACCCCCTTCTCCGATAACTAACAATATGGCTTTAGAATCAGAATCTTCGGAAGCTTTAGCTTTAACTACCACCACAGCTACAGCACCCATCACACCAACACCAAATGATACACATACAACCACTGCTTTACACTCGTCATTAACTGTCAATAGTTTGCTTAATTCTTTATTGGCCAATAATGTTACTACCACACCGGCTGCTTCAATACCTGATCATTATAGTTTAAGATGGAATAATCATCAAAATCATATAATGAGATCATTTGATGCTCTTCTGCAGACCAAAACATTAGTCGATGTCACTTTAGTGTGCGCTGATACCAGTATGAGAGCCCATAAGATGGTATTATCTGCCTGTTCTCCCTTCTTTCAAAGAGTATTTGCTGAGACACCCTGTAAACATCCAATTATTGTACTAAAAGATTTTCGCGGTTGGGTTATTCAGGCTATTATAGATTTCATGTATCGTGGTGAGATAAGTGTACCCCAAGAGAAATTACATACTCTGATAAATGCCGGAGAATCGTTACAAGTTAGAGGTTTGGTGGAAAGTGTTATACCCGAACATACTCCCACTCCTGCGGCTTCACCTGATGATTTTGCCATGCTTGATACTTCTTTGTTGTCTTCAGAATTAGAAAGATGTTCTAGCTTTGATGATGAATCTCCGTCAATGGTTACTTCTGGATCAAAAGTTATATTACCTTCCCGGCTTTTTGGTTCTTCCTACAGACGTGAAAAAGAACGTAAACGGGAAAAGGAACGTGATTTGGAGCATGAATTAGAAAGTGATTACGAGTTATTAAATGAGTCTTTAAATCACAATGAGTTATGTACTTCTCCCATGCCCAGAAGAAAACAGGCTAGACCTAGAAGAAGATCAGGAGAATTAACCCATGATGTGATTAACAAACCTTCCTCACCTATACCACAAGATTGTTCACAACCCTTAGAAGATCTAAGCTTAGAACAGAAATCTAcagaaaataaagaaaatacgCACAATTCTCCCAAGAAGGACGAAGAACCCTTAAAAACTGTGATTAAATCTGAATTAACAGAACCCATGGATAATGATGAAGATCAGGTGGGTGAAAGAGATAGTGGTAATGATAGTCATGAACATCCCGAAGATTTACAAATCAATGAGAAATCTTTGGAACCGGCAATAAACTATGACAATACACGAACAAACCAAGCTCGTCTAAACTCTACAGAGGACTTAGATGAGGAAGACTGTGAGAGAGAAGATCCTGAGGAAGAGGAGGAGGAACCTGAAGATATAGAAGAGCTTATACATAATACCAATGTTTTGAATAGAAGACGTAAGTCGGCCTTGTCAGTTAATTCAGATGGTCCAGAGGATTTGTGTACAACGAAAAAAGACAACGATACTAGTGGTCATCATTCGGCCTCCGATAATGAAGATTCTTCAAATAATAACAATAGCTCTAAATTAAATAACAATAATCGCATAGTATTATCCTTGAAGGATATAAGACAACTTAATAAGCCCTCCTCCTCATCCACTCCCAACTCATCCTCAAATAGTATGATTCCGTTTACATCCTCCAGTCTAAGAGACTTAAGATTAGATCGAGAACGAGCTATGGAAAATCAGTGTAAAATGGAGGTATTAGAAGCACAAATGCAAGCAGCCGCAGAAGCTGCAGCAGCAGCGGCAGCTAGAGGTGAAAATCCTTTTCAACATATGGAACATCAAATGGATTTATCACTGGCAGCAGCGGCAGCCGCAGCTGCAGTATCACAACAACATTCCCGTGAACGAGATCAAGCCCTGCAGAGGGAACATCGAGaattacaacaacaacataGTGCTTATGCTAATAGTATATTAGGTCAAATGGGTATGCCTGGTATGCCTCCATTTGGTCCCGGTTCTGGGGGACCCTCCGGACCAGGAGGACCGTCAGCTCATGAACGTTTAGAAGAAAGTATGAATCGTTTGAGTAAAGAATTTACACCCACCTCACCAATGAGCCTGCCACCACATTACAATCCTCAAGATGGACCACCACATCCACCTTCACCGCTGCCCTTTCCTGGTATGTCATCTTTGGCGTTAACTCCGCCGCACATGTTTGGTTTAGACTCACCATTGGGTTTATTTCCTCCCGGCATCGATCCTGGTAAACTCTATAATCCGTTAATGGAAATGTCAGATCCCAGAGGCATGCCTGGTGATACACCgccctttttaaaaaagaaaaTGCCTAGACCAAAAGGTCAACATTCTGCTCCTCGTGGAGGACCACCACGATCTTGGACAAATGCTGAATTAACTGAAGCTTTACAACATGTATGGAATAAGAAAATGACAACTTCTCAGGCTTCTAGAATCTTTGGCATACCCTATAATTCCTTGTTAATGTATGTGCGGGGCAAATATGGTAAATCTTTAAAATTGGAACAATTACGTAAAGATTGTATAAGTGGTCCACCATTGGAACTATTACAAATGGGTGTGAATGCTGGTTCAAATTCAAGTAGTAAAAACTCGGGAGAAAGTAAAGAACAAAGAGAGGCTCGAAAGGAAGCTCAACGAAATGCTTCTCATTCGGCTAATGAAATGGATATGGGAGGTCCCTTACAAGGCTCAGGACCCAGATCTTCTAGCTCAGAACCTGATTTATTAGGTGCTCCCAATGCTTTGTTTAATCCCTTCAATCCTCAAGGTTTTTATCCTGACTTTCCGGGAGGTTTTCCAGGATTACCTTTAAGTATGTTAAATTTATTACCACCTGCGGAAAGACAACATGCTGCTGCCGCCGCCGCTGCTATGCACCATTCTATGAGTTTAGATGAAGATTGTAAATCAGATCGTTCTAAACAATCCTCTAATATGGATGATGAATTCGCGCTGACACGAGAAGAACGTAGACACTCTGAGATAATGGCTAATGCTTCAACAACTTCATCTTCATCCCAACAAAATGCAACACATGATAATAATGGTTTTGAGTTACCACCACCAAGTGCACCTATACCAACACAACATCATCATCAGTCTCAACATCATCACCATTATCATCACGATACTGAGGAATCTTCTTCACGTCAGGATAAGGAATCGTTTAGATCACATCCATTTAAAgaatttaatcaaaatttatatatggCTCGCAAGAAGTTGAGACGTTATAGACAGAAACGTTTAAAATTCCATGATTCACAAGGCAGTGGATCTGGTTcttataataataaaaattccttaaatatGGAAACATTTATGGCTTTACAACCTCCTCTTAACGTAACACCAACAGTTATAAGAACTTAA
Protein Sequence
MLIESEEIIKRRKLSLTTDTATLYGDFEHTQQAAIPPGTPPSPITNNMALESESSEALALTTTTATAPITPTPNDTHTTTALHSSLTVNSLLNSLLANNVTTTPAASIPDHYSLRWNNHQNHIMRSFDALLQTKTLVDVTLVCADTSMRAHKMVLSACSPFFQRVFAETPCKHPIIVLKDFRGWVIQAIIDFMYRGEISVPQEKLHTLINAGESLQVRGLVESVIPEHTPTPAASPDDFAMLDTSLLSSELERCSSFDDESPSMVTSGSKVILPSRLFGSSYRREKERKREKERDLEHELESDYELLNESLNHNELCTSPMPRRKQARPRRRSGELTHDVINKPSSPIPQDCSQPLEDLSLEQKSTENKENTHNSPKKDEEPLKTVIKSELTEPMDNDEDQVGERDSGNDSHEHPEDLQINEKSLEPAINYDNTRTNQARLNSTEDLDEEDCEREDPEEEEEEPEDIEELIHNTNVLNRRRKSALSVNSDGPEDLCTTKKDNDTSGHHSASDNEDSSNNNNSSKLNNNNRIVLSLKDIRQLNKPSSSSTPNSSSNSMIPFTSSSLRDLRLDRERAMENQCKMEVLEAQMQAAAEAAAAAAARGENPFQHMEHQMDLSLAAAAAAAAVSQQHSRERDQALQREHRELQQQHSAYANSILGQMGMPGMPPFGPGSGGPSGPGGPSAHERLEESMNRLSKEFTPTSPMSLPPHYNPQDGPPHPPSPLPFPGMSSLALTPPHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRGMPGDTPPFLKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLELLQMGVNAGSNSSSKNSGESKEQREARKEAQRNASHSANEMDMGGPLQGSGPRSSSSEPDLLGAPNALFNPFNPQGFYPDFPGGFPGLPLSMLNLLPPAERQHAAAAAAAMHHSMSLDEDCKSDRSKQSSNMDDEFALTREERRHSEIMANASTTSSSSQQNATHDNNGFELPPPSAPIPTQHHHQSQHHHHYHHDTEESSSRQDKESFRSHPFKEFNQNLYMARKKLRRYRQKRLKFHDSQGSGSGSYNNKNSLNMETFMALQPPLNVTPTVIRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00922026;
90% Identity
iTF_00892874; iTF_00716561; iTF_00716842;
80% Identity
iTF_00892874;