Lobt056568.1
Basic Information
- Insect
- Leucophora obtusa
- Gene Symbol
- kn
- Assembly
- GCA_949987735.1
- Location
- OX465299.1:192159495-192197709[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-51 1.5e-47 164.0 0.0 10 134 96 208 87 210 0.93
Sequence Information
- Coding Sequence
- ATGTATAGCCAATGCACAGTGGAAAATCGTAGTGTAAGACCCCCACATAATTTGCTTTTACAAATGCTAGAATTACGCTGTGAAATTAATTTGGTATTATTAAGCGGCTTCAAACTGCGTTCGGACGAGGCTGTGCCGGGTTTTAGCTCGGCTTCACCATGGCCCACACTCGATTTAGAATGGGGTCGGAAATTATATCCTACAGCAGCTCCTCGCTCGGCTGGTGGTTTAATGTTTGGTTTACCACCGACAGCAGCCGATATGAATCAACCACGAGGACCCATGACATCGCTGAAAGAAGAACCATTGGGTGCTCGAGCCTGGATGCAACCTGTAGTTGATCAAAGCAACTTGGGCATTGGTAGAGCCCATTTTGAAAAACAACCTCCCAGTAATTTgagaaaatcaaattttttccacTTTGTTATTGCTTTATACGATCGTGCTGGGCAACCAATTGAAATTGAGAGGACTGCATTTATAGGTTTTATTGAAAAGGATTCAGAATCAGATACTACCAAAACCAATAATGGCATACAATATCGACTGCAATTACTCTATGCAAATGgTGCTAGACAAGAGCAGGATATTTTCGTAAGACTTATAGACTCCGTTTCAAAACAAGTAAGTTAA
- Protein Sequence
- MYSQCTVENRSVRPPHNLLLQMLELRCEINLVLLSGFKLRSDEAVPGFSSASPWPTLDLEWGRKLYPTAAPRSAGGLMFGLPPTAADMNQPRGPMTSLKEEPLGARAWMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVSKQVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01165323;
- 90% Identity
- iTF_00384363;
- 80% Identity
- -