Lvar003985.1
Basic Information
- Insect
- Leucophenga varia
- Gene Symbol
- pnr
- Assembly
- GCA_018903435.1
- Location
- JAEIFJ010000416.1:357418-358486[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-18 1.1e-14 54.1 6.5 1 34 70 102 70 104 0.97
Sequence Information
- Coding Sequence
- ATGGGCGGACCGGGTGGTGGTCCGGGTGGTGTTACAACACTTTCCGAGTTACGCTGTGAAGGTTGTAGTGCTCCATATGTGCGTAAAGGTTCCGATTTATACTGTCCAACTGGTTGCCATACAACAGTACGTGCCATGCGTTTGCCACCGCGTCAATCAAAACCAAAAACACCAGCAGCAACTAATAATCGACGCACCGGTGTCACCTGCGCTAATTGTCAGACAAATTCGACAACGCTCTGGCGTCGCAATAACGATGGTAATCCGGTGTGCAATGCATGTGGTTTATATTTCAAATTGCACAATATGAATCGACCGCTTTCGATGAAAAAGGATGGCATACAGAAACGCAAACGTAAGCCAAAGAATAATTCTGGTGCACCTATGCGGCCACCATTGCCGAGCATGTCACAGGGCGTTAATCTTATAAATGGTGGTCCCATTTATCCATCGCAAGTGCCTGTTGGTCTACATTTAAATAATGGCGTTGGTCCTGCAGCGCTTAGTATGACTTCTTCCGCTGCTGGCAGTCAACGTCATCCGCATGTCACTTCCGATAGCCATTCGCCGTATAGTAATCCGCCATCACAAAGTCAATCGCCGCATTTACCCAACTCGGCAACGCTTAATAGGCAAATTGCACAATCTGTGCCACCAATTGAGTCTGGTCGCAGTTCCAATGGTGAAATGCCTACGAGCGTTATTACACGCACTGGTCTGCCAGAGCGTTCTTCGAATAATTAA
- Protein Sequence
- MGGPGGGPGGVTTLSELRCEGCSAPYVRKGSDLYCPTGCHTTVRAMRLPPRQSKPKTPAATNNRRTGVTCANCQTNSTTLWRRNNDGNPVCNACGLYFKLHNMNRPLSMKKDGIQKRKRKPKNNSGAPMRPPLPSMSQGVNLINGGPIYPSQVPVGLHLNNGVGPAALSMTSSAAGSQRHPHVTSDSHSPYSNPPSQSQSPHLPNSATLNRQIAQSVPPIESGRSSNGEMPTSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -