Lvar000718.1
Basic Information
- Insect
- Leucophenga varia
- Gene Symbol
- grn
- Assembly
- GCA_018903435.1
- Location
- JAEIFJ010002799.1:1060438-1106533[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-20 4.5e-16 58.5 4.7 1 35 237 270 237 271 0.98 2 2 6.4e-19 2.9e-15 55.9 7.5 1 36 297 331 297 331 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACAGCGGAGGCTGCCACGCGCAGCTGGTATGATAGTCCGCGTTTAGGCGGTTCACCACAGACAAATGGACTTGGTTCCGCCGGCAGTGGTGGTGCAGGCAGCGCTGGAGCTGGCCTTGGTTTAGATACAAGTGATATGAGCGCATTTTATGCTCTCGAAAGCAATGGACATCATCGTCGTTACTATCCAAGTTATCATCAACACACATCTCGTATGCCAACGTCACATGCAACACCGCAAGTGTGTCGGCCTCACTTTCATCCACCCCTGAGTTCATGGCTTACCAGCGATCATAAATCTTTTGCGCCCGCCAGTCCATGGGGCAGTCCGTTTGCATGCCCGCAAGAGCCACAGGTCGATCATAAGCTGGGTCAGAGTATCGGACAAAGCCATCAGACATCCGCTGCAGCAGTTGCCGCTGCGACGACAGCAGCGGGTCAGCATTCATTTCCGTTCCCACCAACACCGCCAAAGGATTCAACACCCGATTCAGTACAAACCGGTCCATTGGAATATCAGCAGGCTGTGGTCAATGCTTTTATGCATCAGCAAGCGACAGGCACTACCTCATTGACGGATACAAGTTGTGCGCTCGACATAAAGCCAACAATACATAATGGTCTAAATAGTGCGCATAGCCAAGTAAATCAATCGCAAGGAACAGTACCGAAACAACGTGAAGAGGGTCGTGAATGCGTCAATTGTGGTGCCACCTCCACGCCACTGTGGCGACGTGATGGAACCGGACATTATTTGTGCAATGCCTGTGGTTTATATTATAAAATGAACGGTCAAAATCGACCACTCATCAAGCCAAAGCGAAGACTGACATTGCAGTCACTACAGAGCGCCGCAAAACGTGCGGGGACATCATGTGCGAACTGCAAAACCACAACCACAACCCTTTGGCGACGTAATGCCAGCGGTGAACCAGTGTGTAATGCCTGCGGACTATACTATAAATTGCATAATAAGAAGGGACTCGGTGGCGGTTGTTTACCTATTGGCGGACATTTGGGTATGGGCGATTTTAAGCCATTGGATCCAACAAAAGGCTTTGGCGGTGGTTTTGGCACTTCAATGGCGCAACATGGACATCTTTCCAGTGGCTTGCATCCGGCACATGCGCATATGCATGGTAGTTGGTATACCGGCGGCATGGGTGCACTGGGTGCTTCAAGTGGATTGCAAGGCGGCTTCTCAACAGCTGGTTCATTGGGTGGCGGCGTTGTGCCACATTCGCAACCCTATCATTTGGGTCTTAGCTCAATGGGCACCTGGCGTACTGACTACACGTGA
- Protein Sequence
- MDMTSTAEAATRSWYDSPRLGGSPQTNGLGSAGSGGAGSAGAGLGLDTSDMSAFYALESNGHHRRYYPSYHQHTSRMPTSHATPQVCRPHFHPPLSSWLTSDHKSFAPASPWGSPFACPQEPQVDHKLGQSIGQSHQTSAAAVAAATTAAGQHSFPFPPTPPKDSTPDSVQTGPLEYQQAVVNAFMHQQATGTTSLTDTSCALDIKPTIHNGLNSAHSQVNQSQGTVPKQREEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNKKGLGGGCLPIGGHLGMGDFKPLDPTKGFGGGFGTSMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLGGGVVPHSQPYHLGLSSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -