Basic Information

Insect: Leucophenga varia
Gene Symbol: Znf574
Assembly: GCA_018903435.1
Location: JAEIFJ010000936.1:416521-419054[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.5 1.2e+02 3.8 0.5 1 23 346 369 346 369 0.94

2 10 0.017 1.4 9.9 0.2 6 23 379 396 379 396 0.97

3 10 0.00069 0.055 14.3 0.9 1 23 402 424 402 424 0.98

4 10 0.0015 0.12 13.3 2.4 1 23 438 461 438 461 0.96

5 10 0.029 2.3 9.2 1.2 1 23 469 492 469 492 0.96

6 10 0.0033 0.26 12.2 1.8 3 23 500 521 498 521 0.93

7 10 0.12 9.5 7.3 0.4 2 23 533 555 532 555 0.96

8 10 0.0021 0.17 12.8 4.1 1 23 562 585 562 585 0.93

9 10 2.3e-06 0.00018 22.1 1.3 1 23 591 613 591 613 0.98

10 10 8.8e-05 0.007 17.1 1.2 1 23 619 642 619 642 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.5	1.2e+02	3.8	0.5	1	23	346	369	346	369	0.94
2	10	0.017	1.4	9.9	0.2	6	23	379	396	379	396	0.97
3	10	0.00069	0.055	14.3	0.9	1	23	402	424	402	424	0.98
4	10	0.0015	0.12	13.3	2.4	1	23	438	461	438	461	0.96
5	10	0.029	2.3	9.2	1.2	1	23	469	492	469	492	0.96
6	10	0.0033	0.26	12.2	1.8	3	23	500	521	498	521	0.93
7	10	0.12	9.5	7.3	0.4	2	23	533	555	532	555	0.96
8	10	0.0021	0.17	12.8	4.1	1	23	562	585	562	585	0.93
9	10	2.3e-06	0.00018	22.1	1.3	1	23	591	613	591	613	0.98
10	10	8.8e-05	0.007	17.1	1.2	1	23	619	642	619	642	0.97

Sequence Information

Coding Sequence: ATGTTAGCCTGCTACTTATGCCTTGAGCATAAAACAGAAAATGCACAGAACTATGTACAAATCGATTCGGAGACAGACGAAGATGAAGATGTATCCAAAATTATAGCAAAACACTTTGGACTGAAGCTTAATGGCAACGATAAAAAGAAACAAATATGCTTTGATTGCTGGAAAACAATAAGCAGTTTTCATAAACTCTACGAATTTGTGGCAGCAACGCAGCAGGCATTTAATGAAGCAAAATTGGACACCGCCGGCGTTGACGGCGACGGCATGCTGCATGGTGGCGTCATTGCAGCACAAAACATAACGCTGGAAGATATTGATGATCCACTACCAGCGCAAACATTGGATATAGTAGCATTTAATGCAACCGACGAGAAATTATTTACGGCAACAAATCATCATCGTAATAACCCAAATGAAAATGATTTATTCTGTCCCGAAATAAAAATTGAAGAACATGAACTGGAACAATTGCCGAAAATTGAAATTATTGAGAATACAATTGGAAATGAAAATGTTGTTGAGCATAATAATGGTGGTGTGCGCGTTAGTAGTCGTCTGCGTCAATCGAAACGTTTTAAAAGCGCCAAAACAGATGGCGGCGGCAGAAGCAGCAGAAAATCTACGAATGCAATATTAGCGGAAAAAGGCTTAAATGTTACAGAAGATATTAAAAATGATGAAAATATTACTTTTGTTGATGATGCTAATGATGATGCAAACAATATTGATGAAGATGAAGCTATGGATTTTGCTGACGCTGATATTGATGCTGCTTCCGATGCCAGTTTTACGCTGGGTGATGTTGGCGCCGACAGTGATAGCGATAGTTCGCTTACAGATTTTGAAAAATCTTCCGAAGAACAATATGCCGTTGTACCGAAACGTGTTGTCGTACGTCCAAAGAAGTATCAGAAACGTACAAAACCACTTGTAGCGCCGGTGCGCATGAAACGTGAAGATATTGAACGTCGTCGTGCACAAATGGAAGAATACGATAATATATTAGCGAAATTCTTTAATAATAAATTTGCCTGTGCCGTTTGTAATTTATTAGTGCATAACTTTACCGAAATGGTACGACATCAACGTATCTCACATAATATAGATCAGGGTTTTATGACATGTTGTGGTCGCAAATTTAAACAACGTAAAACTTTAGCGGAACATGCACTTGTACATTGGAATCCAGAGCATTTTAAATGTAATAGCTGCGATAAAACGTTCCAAAATGGACGTTTACTAGAGTTGCACGAATTGACGCATACCGCAACCGGTGATGACAGTGAAAAGGATAAGGAAATATTCCAATGCGATAAGTGCCCGCGTACTTTTGCAAAGAAAACAAGTTTTGATTATCATACGCTTATGAAGCACATGCCTAAATCGGAGTTTAAATTTGCCTGTACACAATGTAATAAGCGGTTACTTACTGAACGCAAACTAAAGAACCATATTAAGTCCGCACATGATCCGGAGAATGCCATTATTTGCGATAAATGTGGACGTCAAATGCGCACTAAGCATAGTTTAAAGAAACATCTTGAGCTAATGCATTCGAATGAACCACGTCCAGAACCAGTGCTTATGCAATGTCAAATCTGTAATACTTGGCTTAAGGATATACGCGGTCTAAAGCAACACATGAAGAGTATACATGTCGAAAGCGCTGGTGAACATCGTTGTCATATTTGCAATAAAATCTCACCGAATGCGCGTGCGCTGCGGCGTCATATTTATCATAATCATGAATGTGAACGTAAATTTAAGTGCACCATGTGCGAGAAAGCATTTAAACGTCCACAGGAGTTACGCGAGCACACATCCACACATACCGGTGAAGTACTCTATACATGTCCAAATTGTCCAATGACATTCTTCTCTAGCGCAAATATGTACAAACATCGTCAACGTTTACATCGTGCACAATATGAAGCGGATAAAAATCAACCGCGTCCTCCAAATATTTTACGTGCAGCTGTAGGCGCTACGGCAGCAATGAAAATGAAATTTATGCACAATCCAGTAACAGAAGCAACAACAACGACAACAATAACATCAAGCACAACAGCTCCAACGCAAGAAAACTTGTCAATAACAATGACAACGGCAACTCAAACAATAACAATCAGCACTGTGGATGATGTTAAATTTACAATATAA
Protein Sequence: MLACYLCLEHKTENAQNYVQIDSETDEDEDVSKIIAKHFGLKLNGNDKKKQICFDCWKTISSFHKLYEFVAATQQAFNEAKLDTAGVDGDGMLHGGVIAAQNITLEDIDDPLPAQTLDIVAFNATDEKLFTATNHHRNNPNENDLFCPEIKIEEHELEQLPKIEIIENTIGNENVVEHNNGGVRVSSRLRQSKRFKSAKTDGGGRSSRKSTNAILAEKGLNVTEDIKNDENITFVDDANDDANNIDEDEAMDFADADIDAASDASFTLGDVGADSDSDSSLTDFEKSSEEQYAVVPKRVVVRPKKYQKRTKPLVAPVRMKREDIERRRAQMEEYDNILAKFFNNKFACAVCNLLVHNFTEMVRHQRISHNIDQGFMTCCGRKFKQRKTLAEHALVHWNPEHFKCNSCDKTFQNGRLLELHELTHTATGDDSEKDKEIFQCDKCPRTFAKKTSFDYHTLMKHMPKSEFKFACTQCNKRLLTERKLKNHIKSAHDPENAIICDKCGRQMRTKHSLKKHLELMHSNEPRPEPVLMQCQICNTWLKDIRGLKQHMKSIHVESAGEHRCHICNKISPNARALRRHIYHNHECERKFKCTMCEKAFKRPQELREHTSTHTGEVLYTCPNCPMTFFSSANMYKHRQRLHRAQYEADKNQPRPPNILRAAVGATAAMKMKFMHNPVTEATTTTTITSSTTAPTQENLSITMTTATQTITISTVDDVKFTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -