Basic Information

Insect: Leucophenga varia
Gene Symbol: RREB1
Assembly: GCA_018903435.1
Location: JAEIFJ010001141.1:253524-261205[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0054 0.43 11.5 0.6 1 21 233 253 233 255 0.96

2 12 8.1e-05 0.0065 17.2 0.2 1 23 265 287 265 287 0.98

3 12 0.044 3.5 8.6 0.8 1 15 293 307 293 310 0.90

4 12 0.12 9.4 7.3 0.0 1 23 474 498 474 498 0.96

5 12 0.045 3.5 8.6 0.7 2 19 504 521 504 521 0.97

6 12 0.00051 0.04 14.7 0.3 1 23 634 656 634 656 0.97

7 12 1.8e-05 0.0014 19.3 1.2 1 23 666 688 666 688 0.99

8 12 0.00077 0.061 14.2 2.0 1 23 694 717 694 717 0.97

9 12 8e-05 0.0063 17.2 0.3 2 23 1405 1426 1404 1426 0.97

10 12 0.13 11 7.1 6.3 1 23 1432 1455 1432 1455 0.97

11 12 0.0075 0.59 11.0 0.6 3 23 1518 1538 1516 1538 0.95

12 12 0.00021 0.017 15.9 5.2 1 23 1544 1566 1544 1566 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0054	0.43	11.5	0.6	1	21	233	253	233	255	0.96
2	12	8.1e-05	0.0065	17.2	0.2	1	23	265	287	265	287	0.98
3	12	0.044	3.5	8.6	0.8	1	15	293	307	293	310	0.90
4	12	0.12	9.4	7.3	0.0	1	23	474	498	474	498	0.96
5	12	0.045	3.5	8.6	0.7	2	19	504	521	504	521	0.97
6	12	0.00051	0.04	14.7	0.3	1	23	634	656	634	656	0.97
7	12	1.8e-05	0.0014	19.3	1.2	1	23	666	688	666	688	0.99
8	12	0.00077	0.061	14.2	2.0	1	23	694	717	694	717	0.97
9	12	8e-05	0.0063	17.2	0.3	2	23	1405	1426	1404	1426	0.97
10	12	0.13	11	7.1	6.3	1	23	1432	1455	1432	1455	0.97
11	12	0.0075	0.59	11.0	0.6	3	23	1518	1538	1516	1538	0.95
12	12	0.00021	0.017	15.9	5.2	1	23	1544	1566	1544	1566	0.99

Sequence Information

Coding Sequence: ATGATTGCAACACAACAGCAACAACAAAAACAAACAGCAACAGCAACATATAGTGATGAACGCAGCATCACAAATGCAGCAGCAGCAGCAACAACAACAACAACAACGAAACAATTAAAAATGGAACGTCGAGAATCGACAACATCTGAATCATCAGTTGAACAACTTGATTTAGGGCGCACACCAAAGAAATTAAATACACACAGTGCAAGCACATCGACACCACATCATCTGCCAATGCATGTTGCTAGTACCAATGGCAATTTAGCAACAACAACAACAACAGCAACATCCTTGCAAACACGTAAACGTAAACTACGTCACACACCAATTGTTGTTGGACGTAAACATAAACAACGTCTTTTGAGCAATAATATACGTCGTTCATCTATATCGAATGGTGCTACTACAACAACAACAACTATGGTGCAACTAGTCGCTGATGAGGCAGGCGGTAATTCATTACGTAAAAAATTTCGTTTTAATCGCAGCAATAGTGGTGGTGGTGGTGTTGCTAGTGGCATTGCACAGTTGCAGCATAGTAACAATGAATCGGGTTTTGTGGATGCCAGTGGTAATGGCAGTCAATATTTGTTGAATGCCACAACAGCAAGCAGCAATGTTAATTTAAGTTCATCCGGTTCAGCTGCATCATCATCAGCCGGTTCATCACCACATAATGCTCTACACATGAAATATGTGTGTCCCATCTGTGAAGTGGTATCAGCGACGCCGCATGAGTTTACCAATCATATACGCTGTCATAATTATGCCTCCGGTGATACAGAGAATTTTACATGCAAAATATGCTCAAAGGTGCTCTCTTCGGCATCATCGCTTGATCGTCATGTACTTGTACACACCGGTGAGCGTCCCTTCAACTGCAAATATTGTCATTTAACCTTTACGACCAATGCCAACAACAATTTAAAGCGCAAAAAGAGCGATCAGCAGCAGCAGCAGCATGATCTCTTGTTAGATTTAAAAGCCAAAAACAATAACAACAAAAATAAAACAGCAACAACCACCGAAATCGAAATTACTAATGCTCCAAACGCACACTTTAACGTTGATAATGATGAGCAACATCAGCAGCAACTTGTACTGATGAAGCATCGACGCGTGAAGACCACAATTAACAATAATATAATAGCAGCTGTCTGTGGAGATCGAGGAGATGGAGATGTTAGCGGTGATGTTGACGCAGCTGAAGTGGATACTGATACTGAAGCTGTTGCTGATATAATTACAAGTACACCTGATGTTGCAACTGTTGCTGCTGGCGCGGAACCGGAAACAAATTCTGATATGGATGAAACAACTGATCCATATCAGCAGCAACAGCGTCATCATCGCCGTCATCATCAGCAGCAACGTCGTCGTGATGAACATGCATCAAAGATTGATATCGACGATACATTCTCATGTCCTGTCTGCAATGATATCGATTTTGAAACGTTGCGTGATCTTAGCGAACATATGGATACGGCACATGCTGAAATACCAGCAAAATGTCGCGATTGTGAAGTTGTATTCCGTACGCATCGTCAGCTCAATATACATCCAATAAATGCTGCTGCTGCTGCTGCAGAAGCTGCTGGCACTGGCAGTGCAACTGGTATTGGCATGCTCTCACCAATCTACTCTAATAATGAGCCCGAATATGATGCTTTGCTCAAATATGAAGCTGCCGATACAAAACATTCGCATGATTCCAAAGATTTAGCCGATATACAATCCATATTGAATATGACATCATCATCGTCCACATCGAATTTCCTTAAGAATTTCGAACAATCGGTTAATACACCATCGAGTAATTATAGTCTCGATAAAGATGAGGAAGAGGCACAGGATGCATTCACCTCTGAGTTTCGTAAAATGAAAATGCTTGGCGAATTTCCGTGCAAACTTTGCACAAAGGTCTTTCCCAATTTACGTGCTCTGAAGGGACACAATCGTATACACTTGAGTGCGGTTGGTCCTGCCGGACCATTCCGCTGTAATATGTGTCCCTATTCGATATGTGACAAGGCAGCATTGGTGCGTCATATGCGCACGCATAACGGTGATCGTCCATACGAATGCGCTGTCTGCAATTATGCCTTCACCACCAAGGCAAACTGTGAGCGTCATTTGCGTAATCGTCATGCCAAAACGACACGTGACGAAGTGAAGCGTGCCATTATCTATCATCCATCGGAGGATTCATCATGCGATGATCCGGTTAAGAAACTACATTTATTTGCAACCGGCTCATCGGATTTCGATGATGATTTAGAGCTGTCCGGTTATGCAACACATCAGCAACATGCAGTAATGCAAATGCAGCCAAAGGATCGTTCGACGCCCGTATCACATTTAAAGGAAATGCTATTGTCCGATAATCATACGCCTACGTCGTCGGTGAAGCCAATGAAAATACAAGTGAAGAGTTTAGAACAGCTGCTTGATAAGTCGAATGTTTACAATGTTGAGTCATGCAATCAATCGGCAACCAGTGGCAGTGGCTCTGTCTCCGGTGGTGATACTGCACCCATTGATCTTAGCATGGATAGTGAGGCACTACAACACAATACAGCGACGAATGTAGTCGAACAAACGCCAGATATGACTGCAGCAACGCTTGCCGATCCGAAATTTGAACTGGACAAGAATCAACAATTCCTGCTTGCACAGCAACAGCAGCTTTTCAATGATGCCTTTCCTAAGGCACTCGTCGATCCGGCACAATACATACAACAGTTGTATCGCAATCTCGCCATGTTTCAGCCGTTAAATCCATTTTTCATGCAGAACACTTTCATGCCCGGACAACTCAATGAATTGCAGAAATATGCACCGCTTATGAATCGTTTATTTGGCGCTAGTGGTGCTGCTGCAGCTGCAGGTATGCCACCTGCAGGCATGCCACCAATGTCGACGAGTATGAGCGCTGATATCGGCAAGCAACGTAATAGCACGCCCAGTCCAGCGACCACTACATTACTGCCACAAATCAGTCCACTCATGTCTGATAAATCATCGAGTACACCATCGATGTCTTCAGTCTCGCCCAGTTCGATTGCACAATTGTTGCCCAAGTCTTTGGCATCGCCGGTAACGAGTAACGCGCTCAATATACCGCGTCATTCACATATGTCGCCACAAGTGTTGCCCGGCGGTCCCGTTAAGATGGTCATCAAAAATGGTGTACTCATGCCCAAGCAGAAACAACGTCGCTATCGCACCGAACGTCCGTTTGCCTGTGAAGCATTGTTCGGCGCGTTTTACCGCAGTGGTCATCATGTAATGCGCGGTCGTGGCGCTAGCAGCGCAACTGCCATGAATAATTTCAGTCATATGCATGCCTTTGCGCAAGCCGCTCAAGCACAACATCAACACAATTCAATGCATGCACAGCAACAGCAGCAACAGTCACAGAACAATGGCAATTGTGCTGGCAGCAATAATGCTGGAGCAATGAGTGCTACGCCAATATCGGATCAAGTGAAATACGCCATATTGGCACAGCAGCTTAAGGCACGCAAGGATACGGATCTATTGCAGCAAGCATTGGCACATGGCTCAAGTAGTGTGGCACCTAATCATTTACTGCTTGGCGGTGGTGGCGGTGCAGCTGGACTACAATCGAATCACATAAAGAAAAAGAACTTAAGCCAGTTATCGCATTGCCCATGGCAACACCGACGAAGCCAATTGCAGATGCAATGCAGAAAATTAAGCCACAAATTGCAGCAACAACAACGACAACAACAAGAGCAACAGAAACAACAACAAAAACCGCCAAAAAGGTTGCCGAAACTATACTGGAGCAAGCCATTAAATCTGGCAAATCGCAAAAAGCCGATAATGTTTCAACAAACAAAAACAGCAGCAGCAACAGCACCGGCAGCCATGAAATCAATGATTGCGCAAGCTGAATCTGTGGGCAAGTTTCTGAAAGAAGTTGCTAGTTCGCCATTTAAAGACGAATCTCAGGATTTGGTATCCGTATCGAAACTTGTTGACAATGCAACTAGCAACAATCAGATGACCTTTAACAATTATTTCCGTCCCAGCGATGTTGCCAATCATATGGAACAAAGCGACGAAGAGGGTCTGGTTGCCTCAGGCAGTGCCAGCGAGAGCAATAATTCTGGCACCGAAGATGTTACAACACCGGCTGAACCAAAAAAGAAATCTGCCTATAGTCTGGCACCGAATCGTGTCTCCTGTCCATATTGTCAACGCATGTTCCCCTGGTCAAGTTCATTGCGTCGTCATATACTAACGCACACGGGACAAAAACCATTTAAATGTTCACACTGCCCATTGCTCTTTACCACAAAGAGTAATTGTGATCGTCATTTATTGCGTAAACATGGCAATGTCGAATCGGCAATGTCTGTCTATGTACCGACAGAAGATGTTACCGAACCGATACCGGTGCCAAAATCTGTCGAGGAAATTGAGCAACAACAGCGACAACGTGAAGAAGAGGAACGTCGTCGTAAAGCCGAAGAAGCGCAACTGGAACGTGAACGTCGTGAGCTGGAGAAACAACTTATTTGCGCTTTTTGCGTACGACGCTTTTGGTCAACGGAAGACTTACGCAGACATATGCGTACACATTCCGGTGAACGTCCATTTCAATGTGAAATATGTCAACGTAAATTTACGCTAAAGCATAGCATGCTGCGTCACATGAAAAAGCATAATGGACGTCAATATAATGGTGCAAATGGTTGTTTAGTTGGTGATCTTGCTGGTGCTGGTAATTCGGGTTCAGATTTTTCCGATGATGAACAATTAACAAATACGCCAGCTGTTACACCGCCACCACCACCGCACCAGCACCACAGTATCAGCGATCAGGGTATATTAAATAAATTGCTATCATCTGCCGATGAAGCTGCCAAGTTATTAGGTGTCGAAAAGTAA
Protein Sequence: MIATQQQQQKQTATATYSDERSITNAAAAATTTTTTKQLKMERRESTTSESSVEQLDLGRTPKKLNTHSASTSTPHHLPMHVASTNGNLATTTTTATSLQTRKRKLRHTPIVVGRKHKQRLLSNNIRRSSISNGATTTTTTMVQLVADEAGGNSLRKKFRFNRSNSGGGGVASGIAQLQHSNNESGFVDASGNGSQYLLNATTASSNVNLSSSGSAASSSAGSSPHNALHMKYVCPICEVVSATPHEFTNHIRCHNYASGDTENFTCKICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNANNNLKRKKSDQQQQQHDLLLDLKAKNNNNKNKTATTTEIEITNAPNAHFNVDNDEQHQQQLVLMKHRRVKTTINNNIIAAVCGDRGDGDVSGDVDAAEVDTDTEAVADIITSTPDVATVAAGAEPETNSDMDETTDPYQQQQRHHRRHHQQQRRRDEHASKIDIDDTFSCPVCNDIDFETLRDLSEHMDTAHAEIPAKCRDCEVVFRTHRQLNIHPINAAAAAAEAAGTGSATGIGMLSPIYSNNEPEYDALLKYEAADTKHSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSLDKDEEEAQDAFTSEFRKMKMLGEFPCKLCTKVFPNLRALKGHNRIHLSAVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDPVKKLHLFATGSSDFDDDLELSGYATHQQHAVMQMQPKDRSTPVSHLKEMLLSDNHTPTSSVKPMKIQVKSLEQLLDKSNVYNVESCNQSATSGSGSVSGGDTAPIDLSMDSEALQHNTATNVVEQTPDMTAATLADPKFELDKNQQFLLAQQQQLFNDAFPKALVDPAQYIQQLYRNLAMFQPLNPFFMQNTFMPGQLNELQKYAPLMNRLFGASGAAAAAGMPPAGMPPMSTSMSADIGKQRNSTPSPATTTLLPQISPLMSDKSSSTPSMSSVSPSSIAQLLPKSLASPVTSNALNIPRHSHMSPQVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEALFGAFYRSGHHVMRGRGASSATAMNNFSHMHAFAQAAQAQHQHNSMHAQQQQQQSQNNGNCAGSNNAGAMSATPISDQVKYAILAQQLKARKDTDLLQQALAHGSSSVAPNHLLLGGGGGAAGLQSNHIKKKNLSQLSHCPWQHRRSQLQMQCRKLSHKLQQQQRQQQEQQKQQQKPPKRLPKLYWSKPLNLANRKKPIMFQQTKTAAATAPAAMKSMIAQAESVGKFLKEVASSPFKDESQDLVSVSKLVDNATSNNQMTFNNYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTTPAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVTEPIPVPKSVEEIEQQQRQREEEERRRKAEEAQLERERRELEKQLICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICQRKFTLKHSMLRHMKKHNGRQYNGANGCLVGDLAGAGNSGSDFSDDEQLTNTPAVTPPPPPHQHHSISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -