Basic Information

Insect: Leucophenga varia
Gene Symbol: erm
Assembly: GCA_018903435.1
Location: JAEIFJ010003052.1:52253-57876[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 2.2e-05 0.0017 19.0 0.8 1 20 408 427 408 430 0.93

2 6 1.1e-06 8.9e-05 23.1 1.6 1 23 436 458 436 458 0.97

3 6 8.8e-07 7e-05 23.4 2.5 1 23 464 486 464 486 0.98

4 6 1e-05 0.00083 20.0 3.2 1 23 492 514 492 514 0.98

5 6 0.0017 0.13 13.1 5.9 1 23 520 542 520 542 0.99

6 6 5.8e-06 0.00046 20.8 4.5 1 23 548 571 548 571 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	2.2e-05	0.0017	19.0	0.8	1	20	408	427	408	430	0.93
2	6	1.1e-06	8.9e-05	23.1	1.6	1	23	436	458	436	458	0.97
3	6	8.8e-07	7e-05	23.4	2.5	1	23	464	486	464	486	0.98
4	6	1e-05	0.00083	20.0	3.2	1	23	492	514	492	514	0.98
5	6	0.0017	0.13	13.1	5.9	1	23	520	542	520	542	0.99
6	6	5.8e-06	0.00046	20.8	4.5	1	23	548	571	548	571	0.98

Sequence Information

Coding Sequence: ATGGTTTACTTTAGTCCTCGTGGCATGCAACCGTGTAGTCCATCGGGTGTTATTGTTGCTGTAATGCCGCCATCGAAGAGTCCCAACATGGAAACTGCTGCAGCACAGAATGGCAATAGTGATGATGCCAACAATATTGAGAAAAATACAAACAATACAAAAACAACAACAATGACGACGACGACGACGACGACAACTAATGCCACAAATGTACGTGCCTGTCCGCTGAAGTTTTCCATAGCAAAGATTATGGAACCCGATCAGCCGTTAAGCACAACAACACAAGAACAGCAACAAACAGGAACAACAACAACAAATGAAGTTGTAGATTATACCACATCATATACAGAAGATACAGTCGACTCAGAACGTTCTTGCAGTCCCATAGAAGTCACCGGCGATGATGATGAGCTTGAGCCAATAACGCCAACACCGCCAAGCAGCAACAGAAACGCAATGCATAACGCTGCAGCAGCAGCAGCCGTAGCCGTAGCGGCAACTGATATCAATTATGATTCTGCTTTTAAAAAGTATGTGCCCAACGCTACCAATGCTGCTGCAGTACAGCAATTTGTTAGTACACGCCAGCAGGAATTACTTTCACAATATCCGCTGCTCTACTATGCACCCAATCAGCTTATGTGTGCCGCTGCTGCAGCACAGTATGCAGCACTAACGGCACAACAGACACAAACGCTATTGGCCAGCTCGGCAAGTGCCGCGCATTTGAGTAATTTTACAGCAACACTCAATTTGCATACGCAAACGTTGCGTCGTAATTTAGCGCCCGGACATCATTTAGCCGCGGCGGCAGCTGCTGCAGCAGCAGCACAACAAGCGCAACAAGCAGCCGCTGCTGCTGGCCAATATACTGCAGCAGCAGCGTTGGCCAGTGCACATCCACAATTGCAACAAACGTTGGAAAAGTCACCCGTACATCATCATCATCATCATAAGTCACGTGATAGCAGCACGCATTATGTAGCGCAACAATTGAAACGTAAACGTTCGCCAGCTGCAGCAGCAGCCATAACGCCGGAACATCAACAGCGTATATCACCACGTGCTGCCGCTGCTGCTGCTGCGGCGGCGTCACGTATACGTACTCCCTCACCAATGTCGCATGCACATACACCAACACACCAATCGCATTCACCAACACAACACGACGATGTTGGCGATGATGATAGTCCCGGTTCGGCCAATGGCAAACAGAAAACATTCTCCTGTCTCGAATGCGGCAAGGTCTTTAATGCACACTACAATCTAACGCGTCACATGCCCGTGCACACTGGCGCCAGACCATTTGTTTGCAAGGTATGCGGCAAAGGTTTCCGGCAGGCTTCGACGCTTTGTCGTCACAAAATCATACACACCTCTGAGAAACCGCACAAATGTCAGACCTGTGGCAAGGCATTCAATCGCTCATCGACCTTAAATACGCATGCGCGCATACATGCCGGCTATAAGCCGTTCGTTTGTGAATATTGCGGCAAGGGTTTTCATCAGAAGGGCAACTATAAGAATCACAAACTGACGCATAGCGGTGAAAAGGCTTACAAGTGTAGCATCTGTAATAAAGCATTCCATCAGGTCTATAATCTAACGTTTCACATGCATACACACAACGATAAAAAGCCGTATACGTGTAAAGTTTGCGCCAAAGGTTTCTGTCGTAATTTTGATCTAAAAAAACATATGCGTAAGCTACACGAAATGGGTGGTAGTGCCTTGGATGATTTGGATATGTCGCCAGCATTTGAACGTAGACGTGAATATACACGACGTGAACCACGTTCGGTGCAAAGCTTTCATAGTCATCCGGGTCAGTTGACGCCCGATTCTTCGGATGGTAGTCTCTCGCCACCGATTAATGTTACAACACCGCCACTTTCTAGTGGAGAAGCAAGTAATTCTGCCTGGCATAAGCCACAATATCAAACGCTTGGCAGCATAAGTCAAGCAACAACACCGACAACAACGCAGCAGCCACAGCAGCAATATGGACAAACTCCAACAAGTTTTCATGCCGCTACAGAGTATGCTGCTAGCTCAGCTTTTATACATTTAGCAAATGCAGCACATCCAGCACATCATCATCAGCATCATCACCATCATCATCAACATTCAAGCCATCATCAGCAACACCAGCACCAGCAGCAACAACAACAACAGCAACGTTTACAATCGGCCATGGAGAATGTACCATTTATTGCCAAAGTATTTTGA
Protein Sequence: MVYFSPRGMQPCSPSGVIVAVMPPSKSPNMETAAAQNGNSDDANNIEKNTNNTKTTTMTTTTTTTTNATNVRACPLKFSIAKIMEPDQPLSTTTQEQQQTGTTTTNEVVDYTTSYTEDTVDSERSCSPIEVTGDDDELEPITPTPPSSNRNAMHNAAAAAAVAVAATDINYDSAFKKYVPNATNAAAVQQFVSTRQQELLSQYPLLYYAPNQLMCAAAAAQYAALTAQQTQTLLASSASAAHLSNFTATLNLHTQTLRRNLAPGHHLAAAAAAAAAAQQAQQAAAAAGQYTAAAALASAHPQLQQTLEKSPVHHHHHHKSRDSSTHYVAQQLKRKRSPAAAAAITPEHQQRISPRAAAAAAAAASRIRTPSPMSHAHTPTHQSHSPTQHDDVGDDDSPGSANGKQKTFSCLECGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQASTLCRHKIIHTSEKPHKCQTCGKAFNRSSTLNTHARIHAGYKPFVCEYCGKGFHQKGNYKNHKLTHSGEKAYKCSICNKAFHQVYNLTFHMHTHNDKKPYTCKVCAKGFCRNFDLKKHMRKLHEMGGSALDDLDMSPAFERRREYTRREPRSVQSFHSHPGQLTPDSSDGSLSPPINVTTPPLSSGEASNSAWHKPQYQTLGSISQATTPTTTQQPQQQYGQTPTSFHAATEYAASSAFIHLANAAHPAHHHQHHHHHHQHSSHHQQHQHQQQQQQQQRLQSAMENVPFIAKVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -