Lvar018987.1
Basic Information
- Insect
- Leucophenga varia
- Gene Symbol
- SMARCC2
- Assembly
- GCA_018903435.1
- Location
- JAEIFJ010001317.1:175364-178672[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.3e-15 8.8e-12 45.3 0.2 3 44 421 462 419 464 0.95
Sequence Information
- Coding Sequence
- ATGTTGCATTGGTATTATTTTCCTGAGTCGTACGATTCGTGGACGGTAAATACATTTGAGTTGCCCGATAACGTACCAGATAATCCAGAATCTCCAGCTGAGCGCTGGCGTGTATCGGCATCGTGGATCTTAGATTTAGAACAATACAACGAATGGATGGCTGAAGAAGATTATGAAGTGGATGAAAAACCGATTGCATCCGCTGGTGGTAAACAAAAAAGACGACGATCTCCGTCACCAGCAACTTCAAAACCTGGCAAACGTAAGCGTTCACCCGCTGTATTGCATAAAAAGTCACGAAATGATGAGGAGGATGAAGACCTAACTCGTGACATGGATGATCCTCCCGCAGAGCCAAATGTACAGGAAGTGGTTAAATCTGCAAATGTATTGCAGTCAACCGCAAGTCCAGCACCTGGAGGAAAATCTCGTGCTGACAATGATATGATGCCCATTAAAGGTGGTACAATGACAGATCTAGATGACGAAATGACTGGTGGGAGTGCAGCCCAAGCACTCTCTACGCTTGACGGCGAAAATTCGCAAACTGGCAAAACGAGCGACAATAGCAATACGCAGGAATTTTCCTCTTCAGTTAAAGAAGATATGGAGGATAATGTTACCGAACAAACGCATCATATAATTGTACCTTCGTACTCTGCTTGGTTTGATTATAATTCGATACATGTTATCGAGAAACGCGCCATGCCCGAGTTTTTCAATAGCAAAAACAAATCGAAGACGCCAGAAATATACATGGCATATCGCAACTTTATGATTGACACCTACCGATTAAATCCCACAGAGTACTTGACTAGTACTGCTTGCCGTCGCAATCTGGCAGGAGATGTTTGTGCAATCATGCGTGTACACGCTTTTCTTGAACAATGGGGTCTGATTAATTATCAAATCGATGCAGATCTGCGTCCTACGCCAATGGGTCCACCACCCACTTCTCATTTTCACATTTTGTCGGATACTCCATCGGGCTTACAGTCTTTGAATCCACAAAAAACTCAACAACCATCTGCTGCAAAGACCCTACTTGATCTCGATAAAAAACCACCAGTTGGTAAAGATGTGAAAGAAGGTTCGGTTGAGGCAGATAAACCAAGCTCTTTACCTGGTGCTGTGGGTATTAAAACTGAACCAATCGAGAACGGTGGCACGACGACGACCGGTCAGTTCGGCTTAAAGTTGGACCAATATGCGAAGAAACCTGCTGCAATGAAAAATCGTACAGCTGCGAGTATGTCGCGTGAATGGACTGATCAGGAAACATTATTATTACTGGAAGGTTTGGAGATGCATAAAGATGATTGGAATAAAGTGTGCGAACATGTTGGCACACGTACTCAAGATGAATGTATACTGCACTTCTTACGTTTGCCAATCGAAGATCCATATCTTGAGGACGATGGAGGCTTTTTAGGTCCTTTAGGCTGTCAGCCTATACCTTTCAGCAAATCAGGCAACCCAATTATGTCTACTGTAGCATTTTTGGCATCCGTTGTTGATCCGCGTGTAGCATCAGCTGCTGCTAAAGCTGCTATGGAAGAGTTTGCGGCAATAAAGGATGAAGTTCCTGCAACCATTATGGACAACCACATGAAAAATGTTGAGAAGGCATCTGTTGGTGGTAAATTTAATCCAACCTTTGGACTTGCTAACAGCGGCATAGCAGGTACCAGCAACGAAAGAGAAGATGAAGAAACAAACGCCAGTGGCGTAGGTGGCGCTACTAACACAGACGAAGAAATGAAGGACATCTCTAAGAAAGAAGACATCAGTAAAAAGTCCGACAAACCAAACACAACCACATCAACAGACGCCAGTTCAAACTCCTCCACAGAAAATAAATCAAATGGTGAAGATGATGATGCTAAAGACAAAGCTGAACAGAAAACCGATTCATCTCCATCATCGAACTCAAATAAAGCAACAACTAACTCATCTTCCTCTAACACAGAACCCAGAGCCAGTGCGACCGCAACGGTGGTAGCTGGAGCTACTGAAAATCAGCTACATGATATTAATAGCGAAGATAATAACAGTGGTGATGTCGATTCAAATACAAAGGATAGTGATGCGCCAAAAACGACCTTCACTGAAAATCATATGCAAACAGCTGCAGCTGCTGCTTTGTCCTCAGCAGCCGTGAAGGCAAAACATCTGGCCGCTTTGGAAGAACGTAAAATCAAGTCTCTAGTTGCCCTACTTGTTGAAACTCAAATGAAAAAGTTGGAAATCAAACTGCGTCATTTTGAGGAACTTGAAGCAACAATGGAACGTGAACGTGAAGGTCTTGAGTACCAGCGACAACAATTGATCACAGAAAGGCAGCAATTTCATTTAGAACAATTAAAAGCAGCAGATTGTCCAACTACAGTAAGCAGTGGTCCGACTGGCGTCTCAACGGCTCCTATAAGTGCAAGTGTCTTGCCGACAACAGTTGCACCCACAGGAGTTAGTGTAACTGCACAAACTTCATCAACACCTATGGATACGACACCACCACCAAGCTCTCAATCCGCACAAGTTACGCCAGCACAAACTGCTGCCAGCGATACACCCGCTGTCACACCGGCGCAACCAGCCACTAATGCGGCACCGCCTCCACAGCCAACCATTCCTGCTACTATTGGTCAAGCTACACCACAATAA
- Protein Sequence
- MLHWYYFPESYDSWTVNTFELPDNVPDNPESPAERWRVSASWILDLEQYNEWMAEEDYEVDEKPIASAGGKQKRRRSPSPATSKPGKRKRSPAVLHKKSRNDEEDEDLTRDMDDPPAEPNVQEVVKSANVLQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAAQALSTLDGENSQTGKTSDNSNTQEFSSSVKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADLRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTQQPSAAKTLLDLDKKPPVGKDVKEGSVEADKPSSLPGAVGIKTEPIENGGTTTTGQFGLKLDQYAKKPAAMKNRTAASMSREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVASAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASVGGKFNPTFGLANSGIAGTSNEREDEETNASGVGGATNTDEEMKDISKKEDISKKSDKPNTTTSTDASSNSSTENKSNGEDDDAKDKAEQKTDSSPSSNSNKATTNSSSSNTEPRASATATVVAGATENQLHDINSEDNNSGDVDSNTKDSDAPKTTFTENHMQTAAAAALSSAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITERQQFHLEQLKAADCPTTVSSGPTGVSTAPISASVLPTTVAPTGVSVTAQTSSTPMDTTPPPSSQSAQVTPAQTAASDTPAVTPAQPATNAAPPPQPTIPATIGQATPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -