Lvar002733.1
Basic Information
- Insect
- Leucophenga varia
- Gene Symbol
- cdc5l
- Assembly
- GCA_018903435.1
- Location
- JAEIFJ010001870.1:109674-112261[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.4 4e+03 -1.6 0.0 4 18 110 124 107 125 0.88 2 5 6.9e-13 8.3e-10 39.0 0.1 2 45 201 245 200 246 0.96 3 5 0.0038 4.6 7.8 0.1 3 32 256 291 254 295 0.83 4 5 4.7e-07 0.00057 20.3 0.0 3 46 313 357 311 357 0.86 5 5 5e-09 6e-06 26.6 0.1 3 44 365 407 364 409 0.96
Sequence Information
- Coding Sequence
- ATGTCGCATTACACTTTTTCCGAGAATAATGCAGAAATCTTATCGCTTGCCAATGATATACAAAACTTTTTCGATAGTTTAACAAGAAAATTAAGAATTTTAAGCGTAGAAGTTGGCAAAAAACATGCAGAAAAGCAGATATTAATCAAGTGTAAGCGTGTCTGTGCAAGCGGGCCACGTCGCACTACACCGCTTTCATATAATGGCAATTTTTACTTTCGTGATAAACGTGGACGCAACTGCCCGAATGTGCCGGACTATGAGCAACGTAAGATCGCGGCTGGTGAATTATTTCCAATGGACTACAATTTGAAAGCGCGTCACCTTTGGACACACTTTGACCAAGCATTGCTTATAAACGGTGTCAAGGAACAGCTTTTCGATCAGTTGATGGTTTTTAACAAACCGAAACCAGCTTATGCCGCACGTTTGAAGCACATTGAAAATGTTAAACTCTCCGAATTGCTGACAATCGCAAACGCGGAGCATAAATTTGAAATTTTATGGAATCAAATTTCCGGTCACAACTTGCAACACCGTCATTCGGCTACGAGCTGTGAGGCAATTTGGCATATATATTTGGATCCAAAATTGAAACGTGCCAACTGGACAACGGACGAAGATAAACGTTTGATTGTTGCTGCCAAAGAATATAATTTTCAGAATTGGCAACGCATAGCGGAAGTGGTGGGTGAACGTTCCGGTTTTCAGTGTTTTTTACGTTATCAAACAAATCACTCGTATATTGCGGAAAAACCGCATGCAAAATGGTGCAAGGAAGATGATAAAGCCTTATTGGATGCCGTTGAACGCGCACACGATTCGCATGAGAATAAAATAAACTGGCTTACGGTTTCACGAAAATTTCCAAATGCAAACTTGACATTTTTACATAAACGTTATGATTTGTTGACTAAACCACGTATACGCGCTGAACAATTCACACCCGAAGAAGACGCACGTCTTATGGAAGCCTTCAAAAGATATTGTGGTAAATTTTATTGTTTTCCACGTAGCTTATTTCCAAATCGTACACGTGCACAATTGCGACAACATTACTATAATACGTTAATACAACGGCCACACATCACGACATGGACCGAAGATGATGACAAAAAATTAATGGATTTTGTTGCACGAAATGGTACCACGTCATGGATTCAATGTGCCAAAATTTTAGGTAATCATACACGTACTGGTTGCCGTACACGTTACTTAACGATTGAACGTTTCTTGAAAAGTTATCCGAATGCTGCAGCCAAAGATTTTCCACGTAGAAATAAATTACGTACACGACGTAATTATGAAAACGTTTCGATGGAACCGCCAAAGAAAAGACGTATTGATACGGAAAATACTATAATAGGCGCCGAAACGAATTTCAATTTTCGTATTTTGTCCAAAGTTTTGAACTACAAGAAACAACAACAACAACAACAATCGAAGAAGAATTCCATAACATGTGTTACACTGCTACCGTATAATTTACGCTTAAAATATGCAAATATGTTGAGCGAACTGCCGGACAAGGAGGAGGAGGAGGAAGAAGATGGGAAAACAAAGAAGCTAGCAGTTGCTACCTATTATAAATTGCCATTAAATTGGTGCACACTGGCAGCATTTCGTGCTATTTGTATACAAATGTCGCAGCCGATATATAAGCCGGAAACGAACGCGGAGACAGAGACAACAACTTCAAATTCAAATGAATCAGAAACTGATACGGAAGAAGACGACGATATGAATTTGGAAGATTCAAGTGATTATGATACTGAAGAGCATGAACAACTTTATATTTATCGTTTGCGCTTGCGCTCAATTTTATTCAAAACAATTTTAATGTGTCGTTTGAATCCGGAAAATGATTTAAAAATACCGGAAACTTTGCGACAACAATTTTTTAATATAATTAATTTTTTTTTTTTTAATATAATATTTAAAAAGTCTAGTCAGTTGAGTGCCTTTGTGTGCCCACACAAAGTAGTACAGCAGGATAAACCAACAAACAGTGAGATTGTGTCTTGTATACTTCTAAAGCCGAGCAGCACAAATATGCCAGGAAAGCTAAATGCAGACAGATGTACATAA
- Protein Sequence
- MSHYTFSENNAEILSLANDIQNFFDSLTRKLRILSVEVGKKHAEKQILIKCKRVCASGPRRTTPLSYNGNFYFRDKRGRNCPNVPDYEQRKIAAGELFPMDYNLKARHLWTHFDQALLINGVKEQLFDQLMVFNKPKPAYAARLKHIENVKLSELLTIANAEHKFEILWNQISGHNLQHRHSATSCEAIWHIYLDPKLKRANWTTDEDKRLIVAAKEYNFQNWQRIAEVVGERSGFQCFLRYQTNHSYIAEKPHAKWCKEDDKALLDAVERAHDSHENKINWLTVSRKFPNANLTFLHKRYDLLTKPRIRAEQFTPEEDARLMEAFKRYCGKFYCFPRSLFPNRTRAQLRQHYYNTLIQRPHITTWTEDDDKKLMDFVARNGTTSWIQCAKILGNHTRTGCRTRYLTIERFLKSYPNAAAKDFPRRNKLRTRRNYENVSMEPPKKRRIDTENTIIGAETNFNFRILSKVLNYKKQQQQQQSKKNSITCVTLLPYNLRLKYANMLSELPDKEEEEEEDGKTKKLAVATYYKLPLNWCTLAAFRAICIQMSQPIYKPETNAETETTTSNSNESETDTEEDDDMNLEDSSDYDTEEHEQLYIYRLRLRSILFKTILMCRLNPENDLKIPETLRQQFFNIINFFFFNIIFKKSSQLSAFVCPHKVVQQDKPTNSEIVSCILLKPSSTNMPGKLNADRCT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -