Lvar002796.1
Basic Information
- Insect
- Leucophenga varia
- Gene Symbol
- Snapc4
- Assembly
- GCA_018903435.1
- Location
- JAEIFJ010001870.1:593275-595465[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 6.3 7.6e+03 -2.5 0.0 22 45 191 216 165 217 0.60 2 5 1.3e-14 1.5e-11 44.5 0.5 1 46 223 269 223 269 0.97 3 5 3.7e-06 0.0044 17.4 0.0 1 44 277 325 277 327 0.88 4 5 1.5e-07 0.00018 21.9 0.0 2 46 334 379 333 379 0.88 5 5 1.3e-11 1.6e-08 34.9 0.2 3 44 387 429 386 431 0.96
Sequence Information
- Coding Sequence
- ATGTCCAAATCCAAGGAAGGCATAAGAAATGAGTTAACCGAGTTCCTAATTAAGCACAGCCAACCAACAGTTGAAAATGCGTTGATTGTTAATCTTGAGCTACAAAATCGTCTGGGAATCATACAACAACAATTAAAAGAACTACAAATAGTAGCGCACAAAAAGCAAATCGAAAATAAACAAATACTGACCAAGCGCTATGCACGAAAAGGACAAAGTCAAAGTGGTGCGCTATTACGTGGTGCTTCCTTCTCATTCAATGGTAATCTCTATTTTCGTGATGGACGTGGCCGGTGTTGTACAAATACGGCAGACTATGAGCAACGCCGGAGCAATGGAGAAATGTTTCCAATGGATTATAATTTACGTGCACGGCACATTTGGACGCTACGCGATAAATCGTGCGTTATAAAAGCAGTAAAGGCGCAACTAGTCGAACACTTGACCTTATTTAAAGCCTACAAATCGAAAAAGCGGCGCACAATTGCTGTAGAATCAGTTAAACTAACAAATCTGTTGGCTATGCTTGATGAAGAGAATAATGATAATAATGATGATAATTTTGAAATTGATTGGAATCAAATTTCTGTTATAGATTTAGAACATCGTCATACACCAACTAGCATTGAAGCGATGTGGCGTGTTTATTTAAAACCAAGTTTAAAACGCTCTGACTGGACAAAGGATGAGGATACGCGTCTTATAAAAGCGGTACAAGAGCATAATTATCAAAATTGGACGCTTATAGCTGCGCAACTTGATAAACGTTCCGATTATCAATGTTTTGTACGCTATCAATCGTGGTTGGTGCAATACGCCGAAAAGCGCCGAAAAAAATGGACTAAAGAGGATGATGTGCGTCTTCTAGAGCTGGTCTCACGTCATACAGATGAGAGTGGCTCTGTTAATTGGACGTATATATTACCATTATTTCCCGATCAACCTAAATCGACGCTATATAATCGTTATTACTATACGCTTGATAAACGTATTAGTCATGAACGTTTTACACCCGAAGAGGATTTATTATTAATTGCTGCCTTCAAGGAGCACAATGGTAAATTTTATTGTTTTCCACGCACATTATTTCCAAATCGTTCGCTACGTCAGTTACGTGCACGCTACTATAATACGCTAGAAGCGCGTGCCAAAATTACCGAATGGACTATAGATGATGATCAAAAATTGCTGGAATTCGTCAAAGAGCATGGTCTGCAGTCATGGCAAAAATGTTCTGAGCTTTTGGGCAATCATACACGCATGAGTTGTCGCACAAGATACGTAACAATACAACGTTTTGTAACAAAGAATCCCGATGCCAGCATAGAAGATATACCACGTAAAAAAACACGTGCCTCAAGAAATGGCATTAATGTAAATAATTGGACTGAAAAGCTAACCGAACTTACTAATAATGAATTAGCAGTAAAACCAATAAAAAATAATCAAAAATCTCGAGTTAAAAGCGATGTAAAAGCTGCACGTAAACAAGCGCCATATTTGAAACGTATACGTCCGCTGCAAAAGCATATTTATAATTTTTTAAAATATGGTTACGGTATACGCTTCGGAGTACCGGAGTTGCAAATATTTGGTGCAACTACAGATTATACATTTCGCATATTAGCCAGTGCACTGTGTTTTAGTAATATGAATTGTAATGAAACATTTAAAGAGGATGAAACATTACCAATCGAATTGAGATTACGTTATGCTGTCATGATACAACAATTACCCGTAGAAATAGCTTTAACGCCATTTTATAAGTTACCAATAAGTTGGAATAGTTTAAATGGATTTCGTGCAATGTGTATACAAGTATCAGAAGCCGAATTTGTTACAGATTCTTCGAGTGTTGCAACAATTTCAGATAACATGGAAACGCATGAACAAGCTGATGCATTGTTAACTTTTCGTGCACGTTTACGTGCACTTTTCTACAAGACAACACTGCTTAGTCGCATTGAACCAGATGATGTTTATGGTCTGGAAGATGAGTTAAAACAAATGACATATACACCGCCGGAACAATGTGAAGCTGTGAGCATACCAGAATTTGATGAATTAACAAATATAAAAGTGTATGAATCAATTTATAGAAATGGAACTTTAGAGGAAATTTAG
- Protein Sequence
- MSKSKEGIRNELTEFLIKHSQPTVENALIVNLELQNRLGIIQQQLKELQIVAHKKQIENKQILTKRYARKGQSQSGALLRGASFSFNGNLYFRDGRGRCCTNTADYEQRRSNGEMFPMDYNLRARHIWTLRDKSCVIKAVKAQLVEHLTLFKAYKSKKRRTIAVESVKLTNLLAMLDEENNDNNDDNFEIDWNQISVIDLEHRHTPTSIEAMWRVYLKPSLKRSDWTKDEDTRLIKAVQEHNYQNWTLIAAQLDKRSDYQCFVRYQSWLVQYAEKRRKKWTKEDDVRLLELVSRHTDESGSVNWTYILPLFPDQPKSTLYNRYYYTLDKRISHERFTPEEDLLLIAAFKEHNGKFYCFPRTLFPNRSLRQLRARYYNTLEARAKITEWTIDDDQKLLEFVKEHGLQSWQKCSELLGNHTRMSCRTRYVTIQRFVTKNPDASIEDIPRKKTRASRNGINVNNWTEKLTELTNNELAVKPIKNNQKSRVKSDVKAARKQAPYLKRIRPLQKHIYNFLKYGYGIRFGVPELQIFGATTDYTFRILASALCFSNMNCNETFKEDETLPIELRLRYAVMIQQLPVEIALTPFYKLPISWNSLNGFRAMCIQVSEAEFVTDSSSVATISDNMETHEQADALLTFRARLRALFYKTTLLSRIEPDDVYGLEDELKQMTYTPPEQCEAVSIPEFDELTNIKVYESIYRNGTLEEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -