Lvar020706.1
Basic Information
- Insect
- Leucophenga varia
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018903435.1
- Location
- JAEIFJ010000812.1:171181-174387[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-14 3.5e-11 43.0 0.0 2 39 39 77 38 82 0.93 2 2 2.7e-18 7.7e-15 54.7 0.0 1 43 406 449 406 451 0.95
Sequence Information
- Coding Sequence
- ATGCGTAAACATGACTCAAGCAGTTTTTGGCCAATCGTATTGAATTTATCTTATCGAATAAAATCGGCCTGTGTCACGCCCACACCCACGCCGCCAGTAAGGCGCCTTTACAATGAGGAAGATCTGAACAGTGCACTGCAGGACATACAGGATGGCAAATTGGGCACACGCAAAGCGGCAGTGATCTATAATGTTCCGCGTTCGACATTGCGCAATAAGCTGTATAAACTGGCACAAGAACGTGAACTCTCAGGTGATGAATGCGGCGATGACAACATTAGCAGCGCTTCGACTACGCCACAGCACACAGGTGATGCTGCGCTGCCGTCACAAGGCACAACAACGTCATCCACACAGCCGTCATTCGATGATCTTGCCAGCCGCATTGCCGCGTCCACAGCACATCTGCGAAAACTTTGCGCTAATGCCGAGAACAACGGTAGTGATCTGGGTGACGAGCCAGAGGCACTGGCATCGAGCAGCTCACCCATGCTGGCAACGACGTTGCGTGCACAAAGTTCCACGCCTACAAATCATCATCCGCTCCAGCAACAGACTTCGCCACAGCCACCTGCGGTGCAGCCAATGTGGATCGATACGAATATGTTGCTTCAAACGATTTTGCTTACCGCTGGCGTATTGCAGCCCAATCTGGACGATACGTTGACCGTGCGTGATCTGCTCAATACATTACTGCTGAACAGTGGCGGTTTTCTCAAAGATTTGGCTAATTCCGAGACGCCGGAAACGGCTTCATCGTTGGACCCTAACGAGTCGTGTGATGATGCGGCAGCAGCCATTCTGAAAATTCCGTCCTTTAAGCCGGTTACCGGTGGGTCGAGTTCCTCGCCTTCGTTGCTTTCAAATAATAATAACAATTCTAATTCGAGCACCAATCGAAATGGCGATACGTCACCACCGTCGTTCCGCGAAGTAATGAAGAACAGCATACACCGTCAGATAAATGAGCAGGCAACCAAGGACGCACAGGCTGCAGCAGCCGCATCGATGTTGGGTCTTGGCGCTGATCAACTGGAACGCAATAACGGCAACATCATTGGTGACTACAAGAAACCCAGCATTTCTGTTGCCAAAATAATCGGTGGCACGGATACATCCCGCTTTGGTGCATCGCCAAATCTACTTCGACAGGAAGCTGCCGCGCTGGCCGCTGGCAAGGGTACGCGTCCGAAACGCGGAAAGTATCGCAACTACGATCGCGACAGTCTTGTCGAGGCTGTAAAAGCTGTGCAACGCGGTGAGATGTCTGTGCATCGCGCTGGCAGTTTTTACGGCGTGCCACACTCAACACTCGAGTACAAGGTTAAGGAACGCCACCTAATGCGGCCACGTAAGCGCGAGCCAAAACCACAGCCGGGCTTAGATGGACTCACCGGCAGCGGAAGCAGCAGCTCAAGTAGCGTTGCCAACAAGAACTCAAACATTCCAGGACTAAACCACCTCGATAAGCTGAAGGCGGCGAGCGGTGCAAGCAATTCAAAGCTCAGCAACGCACTTAAAAACAATGCACAGCAGGCGCCGAATGGCATCAAGCTGCCGCTGTTCGATGCTAGCGTTGCCTCACAACTGCCCTACCAGCCGCACATGTTCTGGCAGCCGTCAGCGAATGCAGCCAACTTCGGACTCGACTTCAATCGCAATGCAGCGGCTGCAGCAGCTGCTGCTGCGGCAACGGCGCAAGGCGCTGCCGGAAACGTTAACTCTGATTTCCTAAATTCACACATACAAGAGGCAATGCGCATGAATGCCGCAGTCGCCGCTGGCAATGCTGCCAGTAATGCCAATAGTCCAAGTCCGCTGGGCGCTGTTGGCATTGGCATTGGCATACATCCTAATCAAAACCATCACGGTGGCATGCAAATGAATAGCGCACGTGACATTGAAGAGAATCTCTACGATGTCATAATACGCAAAACGCTCGATCGAAAGAGCGCCGATGGTGGTCCACCGAGCAGCGGCAACGGAGGCCAGCTGCTCGATCAACTGCTCGTAAAGAAATCCCCGCTACCGTTCACAAACAATCGCAACAATGATTACGCTGCTTGCTCCTCCTCACATACGAATAAACGCACGGGAAGCCCGCTGGCTTATACGGACATTAAGCGTGAGCGTGCCAGTCCCGAACAGCCAAGCACATCACCATCAACAACACCTCTACCGCTACCGTCAGTAACGCTTGCACCGCTTGCATTAGACAACAACACCACCACCAGCAATACCAACTCCAGCTCATCCATACTACACGAGAAGCTGGCGCAGATCAAAGCGGAGACGGCAGCAGCACACGGTGAATCAAATTTATAG
- Protein Sequence
- MRKHDSSSFWPIVLNLSYRIKSACVTPTPTPPVRRLYNEEDLNSALQDIQDGKLGTRKAAVIYNVPRSTLRNKLYKLAQERELSGDECGDDNISSASTTPQHTGDAALPSQGTTTSSTQPSFDDLASRIAASTAHLRKLCANAENNGSDLGDEPEALASSSSPMLATTLRAQSSTPTNHHPLQQQTSPQPPAVQPMWIDTNMLLQTILLTAGVLQPNLDDTLTVRDLLNTLLLNSGGFLKDLANSETPETASSLDPNESCDDAAAAILKIPSFKPVTGGSSSSPSLLSNNNNNSNSSTNRNGDTSPPSFREVMKNSIHRQINEQATKDAQAAAAASMLGLGADQLERNNGNIIGDYKKPSISVAKIIGGTDTSRFGASPNLLRQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGLTGSGSSSSSSVANKNSNIPGLNHLDKLKAASGASNSKLSNALKNNAQQAPNGIKLPLFDASVASQLPYQPHMFWQPSANAANFGLDFNRNAAAAAAAAAATAQGAAGNVNSDFLNSHIQEAMRMNAAVAAGNAASNANSPSPLGAVGIGIGIHPNQNHHGGMQMNSARDIEENLYDVIIRKTLDRKSADGGPPSSGNGGQLLDQLLVKKSPLPFTNNRNNDYAACSSSHTNKRTGSPLAYTDIKRERASPEQPSTSPSTTPLPLPSVTLAPLALDNNTTTSNTNSSSSILHEKLAQIKAETAAAHGESNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -