Lvar009124.1
Basic Information
- Insect
- Leucophenga varia
- Gene Symbol
- kn
- Assembly
- GCA_018903435.1
- Location
- JAEIFJ010000369.1:864125-902881[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-235 6.6e-231 768.0 0.0 41 385 5 377 2 380 0.99 2 2 6.1e-08 0.0014 17.4 18.6 422 543 380 503 376 505 0.73
Sequence Information
- Coding Sequence
- ATGCGTTGTGAGACTTCTAGTTTGGGCATCGGTCGCGCCCATTTTGAAAAACAACCGCCAAGTAATTTACGTAAATCGAATTTCTTTCATTTTGTTATCGCGTTATACGATCGCGCCGGTCAACCGGTTGAAATTGAACGTACTGCATTTATTGGATTTATTGAAAAGGACTCAGAATCGGATTCGACAAAGACAAATAATGGTATACAATATAAATTGCAGTTGCTCTATGCAAATGGAGCACGCCAGGAACAGGACATCTTTGTGCGTTTAATCGATTCAGTGACGAAACAGGCCATCATCTATGAGGGACAGGATAAAAATCCCGAAATGTGTCGCGTATTATTAACGCATGAAGTGATGTGCAGCCGCTGCTGTGATAAGAAAAGCTGTGGTAACCGCAACGAAACACCATCAGACCCTGTCATTATTGATCGCTTCTTCTTGAAATTCTTCTTAAAATGTAATCAAAATTGTTTAAAAAATGCTGGAAATCCAAGAGATATGCGAAGATTTCAGGTTGTTATCTCCACACAAGTAACTGTAGATGGTCCATTATTAGCAATATCGGATAATATGTTTGTACACAATAATTCAAAACATGGACGTCGTGCTAAGCGTTTGGATACCACGGAAGGTACAGGAAACAACTCCCTGTCCATAAACGGTCATCCCCTAGCGCCTGACAGTACCTATGATGGTCTCTATCCACCGTTGCCTGTTGCCACACCCTGTATTAAGGCTATATCACCCAGTGAAGGCTGGACCACTGGCGGTGCTACAGTTATTATTGTTGGCGATAATTTCTTTGATGGTTTACAAGTTGTCTTTGGTACAATGCTCGTCTGGAGTGAACTGATTACATCGCATGCGATACGCGTACAAACGCCACCACGACATATACCCGGCGTTGTCGAGGTAACGCTTTCGTATAAGAGCAAACAATTCTGTAAAGGTTCACCGGGTCGTTTTGTTTATGTTTCACTGAATGAACCAACCATTGATTATGGTTTCCAGCGTTTGCAGAAACTTATACCACGACATCCTGGTGATCCCGAAAAACTACAAAAAGAAATTATATTAAAACGTGCTGCAGATTTGGTTGAGGCGCTTTATTCGATGCCACGCTCTCCTGGCGGTTCTACCGGCTTCAATTCATATGCCGGCCAATTGGCTGTCAGCGTACAAGATGCTACGGGTTCTGGTCAATGGACCGAAGATGATTATCAGCGTGCACAATCGAGCAGTGTCAGTCCACGTGGTGGTTATTGCAGCAGCGCTTCGACACCACACAGTTCAGGTGGTTCATATGGTGCCAGCACTGTGTCAACGGCAGCTGTTGCCGCTACAGCGAATGGTTATGCGCCCTCAGCAAATATGGGCACACTGTCATCATCACCGGGCAGCGTATTCAATTCGACTTCAAGAGTAAGCAGCCTTAGTTTCAATCCATTTACGCTACCCACATGCAATACTCAAGGCTATAGCACAAGTCAGCTGGTAACATCGACCAAATAA
- Protein Sequence
- MRCETSSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFIEKDSESDSTKTNNGIQYKLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNNSLSINGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDATGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGASTVSTAAVAATANGYAPSANMGTLSSSPGSVFNSTSRVSSLSFNPFTLPTCNTQGYSTSQLVTSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00580491;
- 90% Identity
- iTF_00580491;
- 80% Identity
- -