Lvar016118.1
Basic Information
- Insect
- Leucophenga varia
- Gene Symbol
- retn
- Assembly
- GCA_018903435.1
- Location
- JAEIFJ010000935.1:5370574-5401077[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-26 1.7e-22 79.9 0.0 2 89 308 393 307 393 0.96
Sequence Information
- Coding Sequence
- ATGGATTGTAACGGACGTTCAAATAATATTGAACGTGATTCTGATCTAGGTGACGACATGTCACATGGTGATCGTACAGATGATGATGATATGCGTGATTGTGATTCACTGGATGGTGACAATATCAAGCAGCAACAACAGACAGCGTCAATAAGAACAACAGCAAACGGCAGCAAAGTGAAGCGCTTAAATCCTCATCACTCCATATCGACTAATGGTGCTGCTGGCGGTGTTGTTGGTGGTGGTAGTATTGGAGGTGGCGGTATGTACTTCAATGATAACGGCAGCAGCAATGGTGCTGAGCTTAGTCCAAGACAACAACAGCAGCAACAACAGCAGCAACATGCTGAATTAGATTTAAGACATCATCAATTACCACCAAATCATCCGTTAAATACGCTGGGCAGCTTCATGGGCATAAGCGGTTTACATGGCATTCCGAATTTACAGACACACAGCGATGTGCTCGAAAAGCTTAAAATGCAAGTGCGCGATATGAAAGTTGGTTTGGATCCCGATTATGCAGCACATGGCTTAGCATTTGCTGGCGCTGCTGCTGCTGCTGCTGGCGGCATGTTGCCAACGTCACACAATACAAGTTTTACATTGCCACCGCCTGCAATTGGCACTTTTGGTGCACAACAGCAGCAGGCAGCGAACGGTAATAGCGGTGCTGCACATGCATCCTTTGGTGCAAACAATGGCACACTTGGCGGTGTTGCTGCTGCTGCTGGTGGTGGTAATAATGGCGCTTTTGCTTTTACCTCGCCTACAGCACCAAGCGCTAAAGAAGTAAATTCGGCTTCAAATTCATCAACTTCAAGCGAGGCATCAAATTCATCACAACAAAATAACGGCTGGAGCTTCGAGGAGCAATACAAACAAGTCAGACAGTTATATGAAATCAATGATGATCCTAAGCGTAAGGAATTTCTCGATGATTTATTCTCATATATGCAAAAACGTGGTACACCGATTAATCGTTTACCTATTATGGCCAAATCTGTACTGGATTTATATGAACTTTATAATTTGGTAATTGCACGTGGCGGTCTTGTTGATGTTATAAATAAAAAATTATGGCAAGAGATCATCAAAGGATTACATTTACCATCGAGCATAACAAGCGCAGCATTTACGTTGCGTACGCAATACATGAAGTATCTTTATCCATACGAATGCGAGAAAAAGAATCTTAGTACACCAGCTGAATTGCAAGCGGCCATTGATGGCAATCGACGCGAAGGACGTCGTTCTAGTTATGGCCAATATGAGGCAATGCATAGTCAAATACCAATGAGTCAAATGTCACGTCCAACACTTCCCGGCGGTTTACAGCAAATTGAGGCGCTCAATCTCTCCGATTCGCTGCCCAGCTACAATATAAAACGTGAACGCGAACGTGAACAAACACCTGAACCCAATTTAACTGTTAACGAACGCATACGCGAACATTTAAATGGAAATATTGAACGCAGCGGCGTTCATGGCGATGGAGCCGATGGTGGCAGTGGCGGTGGCAGTGGCGGAAATCATTTACTGGACAAATCTGATGATTCTGCAATTGAAAATTCACCATCAACATCAACAGGCAATCGACATAATTTCTCTGCCAATGGTGAACAGCAACTTGTAGTGAATCTACAGCTAAATGGTGTCAAATTCTCTGGTGTACTTGTTGCCAATACTACAAATTATACAAATAAAAAGTTAAATAGCAGCAACAACAACAAATGCAATAATGATATAGAACAAGCAACAGAGGCGCTAGAAATTGAAATGCCCGAAAATGTCAGCAGCAACAATAATAACAGCAACAGCAACAAAAGCATTGAGAAAGTGGCAAGCAAATTGGCCTTGACGCCATTAAATGAGGCAGTACTGAGCTCCACTTAA
- Protein Sequence
- MDCNGRSNNIERDSDLGDDMSHGDRTDDDDMRDCDSLDGDNIKQQQQTASIRTTANGSKVKRLNPHHSISTNGAAGGVVGGGSIGGGGMYFNDNGSSNGAELSPRQQQQQQQQQHAELDLRHHQLPPNHPLNTLGSFMGISGLHGIPNLQTHSDVLEKLKMQVRDMKVGLDPDYAAHGLAFAGAAAAAAGGMLPTSHNTSFTLPPPAIGTFGAQQQQAANGNSGAAHASFGANNGTLGGVAAAAGGGNNGAFAFTSPTAPSAKEVNSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQIPMSQMSRPTLPGGLQQIEALNLSDSLPSYNIKREREREQTPEPNLTVNERIREHLNGNIERSGVHGDGADGGSGGGSGGNHLLDKSDDSAIENSPSTSTGNRHNFSANGEQQLVVNLQLNGVKFSGVLVANTTNYTNKKLNSSNNNKCNNDIEQATEALEIEMPENVSSNNNNSNSNKSIEKVASKLALTPLNEAVLSST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -