Lmon002578.1
Basic Information
- Insect
- Leucophenga montana
- Gene Symbol
- nfxl1
- Assembly
- GCA_035044765.1
- Location
- JAWNNQ010000324.1:25543-33877[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 2.2e+04 -7.8 5.6 15 19 151 155 150 155 0.81 2 18 0.12 1.3e+03 -0.2 0.4 4 10 186 192 185 194 0.94 3 18 2e-07 0.0022 18.2 13.4 1 18 200 216 200 217 0.98 4 18 2 2.2e+04 -4.5 1.6 6 10 242 246 241 246 0.84 5 18 7.8e-06 0.086 13.2 16.1 1 19 252 271 252 271 0.97 6 18 0.2 2.2e+03 -0.9 1.5 5 10 296 301 296 301 0.91 7 18 8.1e-09 8.9e-05 22.7 12.5 1 19 307 325 307 325 0.99 8 18 0.054 5.9e+02 0.9 0.6 5 12 349 356 349 356 0.87 9 18 3.1e-06 0.034 14.4 11.4 1 18 360 377 360 378 0.96 10 18 0.059 6.5e+02 0.8 0.5 1 10 387 396 387 396 0.80 11 18 1.2e-06 0.013 15.8 15.1 1 18 412 429 412 430 0.97 12 18 4.4e-08 0.00049 20.3 15.1 1 19 439 457 433 457 0.90 13 18 0.00055 6.1 7.3 4.2 10 18 503 511 500 512 0.90 14 18 0.014 1.5e+02 2.8 5.4 1 11 524 533 524 534 0.95 15 18 2.8e-05 0.31 11.4 5.0 1 12 598 609 598 609 0.97 16 18 2 2.2e+04 -4.4 1.5 15 18 622 625 622 626 0.85 17 18 0.0093 1e+02 3.3 13.3 3 19 638 654 637 654 0.93 18 18 1.7e-06 0.019 15.3 11.0 1 16 704 718 704 724 0.92
Sequence Information
- Coding Sequence
- ATGGAGTTCAGGAAATTCATGCAGGTACGGGCAAAGAATATGGCAGATGCCCAGCGAATTGTTGATTATGAGTCAAGCTCTGAAGATGATGTCGATATCGATGAGAAAAGTATTTTAGCTGCGCTTTACCAGCACTATAAACCAGCACCGAAGGTAGGCACAAGTGTCGATGTCAATCAATTGCAGAAGACAACGGCGTTCCTGGAGAGTGCGCTACAGTCCGGCTCTGTAACATGCTTGATTTGTATTGGAAGTGTACGCCGGAACAACGCAATTTGGAGTTGCAGCAGTTGTTACGGCTTCTTTCACCTCAACTGCATACAGCGGTGGGCTAACGATAGCCTTATGCAATTGAAGGTACGAGCTGCAGATCGTCAGACGGATCAGGGCTATTATAATAATCTTGGCCAATTTGTTCCGCCTAAACGACAGCGAGAGTTGCATTGGTGCTGTCCTAAATGTCGCACGGAATATGACCCTCAGAATAAGCCAACGCAATATGAATGCTTTTGCGGTAAAGAGATCAATCCACTGCCGCAGCCATTTCTCATGCCGCACTCTTGTGGTGAAATTTGTAGTAAACAACTCCAGCCGATCTGCGGTCATGATTGCAAAATGCTCTGTCATCCTGGACCCTGTGCGCCTTGTGCACAGTATGCATTTAATTCATGCCTAtgtgagaaaaataaaagatcGGGACGTTGTCTTGATAAGAATTGGCAGTGTCAGACATTGTGCAAGGAAATATTGTCCTGCGGCAAGCACTTGTGCAAGCAGCGTTGTCATCAGCAAGGAAAATGCCCACCTTGCAAAGAGACCAACAACCGACAACCCTGTGAATGTGGCCGAGAATTTAAAGACCGAAACTGTTCTGACCTTAAGTGGAACTGCCAGCAGGTATGCGGAGTATTATTTCCTTGTGGTCTACATTCTTGCAAAAAAGTATGTCATGCCGGAGCATGTGGAGAATGTCCGCTCGGATTGCCACGAACGTGTCCTTGCGGCAAAACGACTAAAGTGGGACCTTGTACACAACCAATCGAAAATTGTGGAGACACATGCCATAAGCTACTTACTTGTGGGCTACATAGCTGCACACAGAGATGCCATCGTGGCGGTTGCAACATATGTTTGGTGACAGTGAAAAAGCAATGTCGCTGTGGAATGCATACGAGAGAATTACCCTGCTCTAAAGAATTTGTTTGCGATACGAAATGCAAGCAAATGCGCGATTGCGGCAAACATCTTTGTAATCGAAAGTGTTGCGATGGTCTGTGCCCACCCTGTGAGAAGATTTGTGGAAAACAGCTAACCTGCAACAAACATAAATGCCAATCGGTGTGCCATAATGGGCCGTGTTATCCATGCCAATTACAATCGACTATAAATTGTCGATGCGGTAAGACACGTAAAATCGTGCCCTGTGGTCGGGAACGCAGCATTCGAATAGTCTGCATGGAACTCTGTCGTATTACATCCAAATGTCACCATCCAACTACACATCGGTGCCACAAGGGCTATTGCCCAGCGTGCAATCAAAAATGTGGTCTTAAAAATGATTCTAGTGGTTGTGGCCACGTATGCTTAGCTAAATGTCATGCCGCAGTGCGAGTTAAAATGGCGGTTCCGAATGTAAAAGAGTGTGCTAAGTTTGGTTTCGAAAATTTACCCCACCCGAGGTGCGAAGAGAAGGTAACGGTTTGTTGTATTGGAGGTCATGAAATCGCCACCATGCCGTGCTGGAATTCGAAACCTACATCGTGTCATCGAAAATGTAATCGGCTACTGATTTGTGGCAGCCACTCATGTGAATTGATATGCCACTCTGTTCCGGATATACAAGACAAGAATCAACAAGTTGGTTGTGCACCTTGTGAAGAAGGCTGCAGTATACCGCGGCCTGCAGGATGTATACATCCATGCCAGAACCCGTGCCATTTGCCACCATGCGCAGCTTGCTCTGTCTTTATCAAAAGTAATTGTCATTGCGGTCTCTCCCAAGTAATATATAAGTGCAGCGAGTTCTACTCCCTTGGAACAGAAGAAGAAATGAGAGAGCGACAGGAACGTTTTAAGAGTTGCGGAAATCGATGCATTAAAAATTTTCCATGCGGTCATCGGTGTGCAACAATATGTCACCCAGGCAGCTGTCCTAATCCTGATTTGTGTCGCAAAAAGGTAAAAATTTTCTGCGACTGTAAGAAACTAAAGCTTGAGGTATCGTGCGAGAAATATCGTACCGGCCAAATAAAGTTGCCCTGTGAAGAGCAGTGTACCAGTGCCCGTGCGAAAACTGAACTAGCACTAAAGGCACAACTGGAGCAACAGCGCCGCAAGGAAGAGGCTAAAAATCGTATTGAACTAGAGcagtttgaaaaaaagtttggCAAACACAGAACAAACAAAGAACGTAAGGTACATGTAGAAAAGTACAAACCGAAAACCAATTGGAAATTAATAGGTATCGTTGTTGGTATATTCGTATCActttttgttgctgtagctgttgccttctacgcagaaaattaa
- Protein Sequence
- MEFRKFMQVRAKNMADAQRIVDYESSSEDDVDIDEKSILAALYQHYKPAPKVGTSVDVNQLQKTTAFLESALQSGSVTCLICIGSVRRNNAIWSCSSCYGFFHLNCIQRWANDSLMQLKVRAADRQTDQGYYNNLGQFVPPKRQRELHWCCPKCRTEYDPQNKPTQYECFCGKEINPLPQPFLMPHSCGEICSKQLQPICGHDCKMLCHPGPCAPCAQYAFNSCLCEKNKRSGRCLDKNWQCQTLCKEILSCGKHLCKQRCHQQGKCPPCKETNNRQPCECGREFKDRNCSDLKWNCQQVCGVLFPCGLHSCKKVCHAGACGECPLGLPRTCPCGKTTKVGPCTQPIENCGDTCHKLLTCGLHSCTQRCHRGGCNICLVTVKKQCRCGMHTRELPCSKEFVCDTKCKQMRDCGKHLCNRKCCDGLCPPCEKICGKQLTCNKHKCQSVCHNGPCYPCQLQSTINCRCGKTRKIVPCGRERSIRIVCMELCRITSKCHHPTTHRCHKGYCPACNQKCGLKNDSSGCGHVCLAKCHAAVRVKMAVPNVKECAKFGFENLPHPRCEEKVTVCCIGGHEIATMPCWNSKPTSCHRKCNRLLICGSHSCELICHSVPDIQDKNQQVGCAPCEEGCSIPRPAGCIHPCQNPCHLPPCAACSVFIKSNCHCGLSQVIYKCSEFYSLGTEEEMRERQERFKSCGNRCIKNFPCGHRCATICHPGSCPNPDLCRKKVKIFCDCKKLKLEVSCEKYRTGQIKLPCEEQCTSARAKTELALKAQLEQQRRKEEAKNRIELEQFEKKFGKHRTNKERKVHVEKYKPKTNWKLIGIVVGIFVSLFVAVAVAFYAEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890652;
- 90% Identity
- -
- 80% Identity
- -