Basic Information

Gene Symbol
Zfy2_1
Assembly
GCA_035044765.1
Location
JAWNNQ010001577.1:591361-593366[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 2.3e-05 0.0013 19.3 0.4 1 23 464 486 464 486 0.98
2 6 0.0035 0.21 12.4 1.8 1 23 496 518 496 518 0.98
3 6 1.3e-05 0.00078 20.0 0.4 3 23 526 546 524 546 0.98
4 6 8.5e-06 0.0005 20.7 1.0 1 23 552 575 552 575 0.97
5 6 0.00012 0.0071 17.0 6.6 1 23 582 604 582 604 0.97
6 6 0.0001 0.006 17.2 0.3 1 23 609 632 609 632 0.94

Sequence Information

Coding Sequence
ATGAAGGAGGACCAACGTTACCCCGATTTGACAAAAATATGCCGTCTCTGTCTAAAGGTGGACAGCGAAAATATCTTCCAAATTTTCACTGTTGACGAATCGGAGCTGTCCATACCAATGCGAATCATGACGTGTGCATCGTTGGAGGTGAAGGCTGCTGATGGCTTACCGAAGCAGATATGCTACGACTGTCGTTACGAATTGGAGAAATCATTTTTGTTTCGCAAGCGATGCCAAGTGTCAGACAGTAAGCTTCGGAAGCATATACGTTTGTTAAGCTTGGGCAAGAAAAGTCGCATTTTCTGCAAAtcagatgatgatgacgacgaggAAGAACTAGAGTTCGAGGATTCGGTGCTGTTTCTCAGGGATCAGGATGAATTGAAAAGGAGGAATGCTGAACTGTGGAAAGCTGAATATAAACTGGAGATGGAAGAGTTACTTGTGAAACAACTCGAAGATGCTAAGGCTGATGTGAAGAAGGAATTACGAGGGGAGGTAGTGGATACAGTGCGCGATGAATTGCGGAGCAGGATACAGGAGGAAGTACGAACTGAGCTGCGCTGTGAAGTGGTTAACGAGGTTAGAGAACAACTTCAGACTGAAGTGAAAGAAGAATGCCGAAAAGAACAAATTAGTGTACTTCTAGCAGAAATGGAAGTATATCTCAGTACAAAGCAAGCATACGAAAGCATCAGTATTGATAATGATGGCAGTGAATACAATATAAACGAAAAGGATAACGCAGTGTATCCGGTATATTTGAGCGCACAGAAGGAAATAAAGCGTAGGCGAAAACGTCTGTTACCGACAACTCCCAATAGCAGCGAAGACGAAAACATTTTGACAGAGCCAGCTGCGAAGAAACATAATATTATGGCAAccaacaatgatgatgatgacgcgGTAACGGAAAAGTCCATTGAACAAACTGTAAACGACAAAATTTACATGTTAGACGACAATGTACAAATATCAAAATCTATAATAGCTAAACAAAATCAGGCTGCGCCTGAGGCAATTAATGAAGTTTTCGACGACGTTACTGATAGCAACCGTATAACATCATACGAAAttcagGAGAACGGGGAAATTCATTTTTGTGAGAAACCACTCTTGCTCGGAAGTTCTACGacgtcaaaaaatataaaattggaaaCAAAAACGACATCGAACATGATGCTACTAGATCTGGGCAACGAAGTGGTCGAATTCGTTAATTTGGACGTGGGAAAATCAAATACGGAGCTGCAGACAAATACGGCAAATACAAGTTCGGACAAAATGTTCGCTAAAATTAAACCGAACAACGCGAACTCTGTAGAGAGCATAGATAACTTTAATTTCGTTACTACAGTAGCACGGCGTCAAACGGACACTGTTAAATCATTCAGCTGTAAATTATGTCCCATAGAATTCTCAACGGAAACGGCACTGCGGCGTCATGCTCGTTCTCACCAACGCACTCTGGAGAAGGGCATACATTATCAATGTCCTGATTGTAAGCTATATCTATCGTGCTCAAGTTCACTAAAACGCCACATGGTAATACATACTGGTGAAAAGCCTTATGGATGCAATGAATGCGGCAAAACCTTTGTGCAGCGCGAAATTCTCAAACGTCATATGGATACACATTCTGGCGTGCGGCCCTACGTTTGTCCACACTGTAAACAAGGCTTTGCACAAAAAACCAATCTAGTGAATCACGTTAACAAGTTGCATTTAGATCAGCCGAAGCTACACTCTTGTCATCTGTGCACGAAAAAGTTTACACATGCCTCCGGACTTAGTAGACATTTAATAACGCATTCCGGCATAATGTATCAGTGTACGCAATGTAACCGTCCATTTGGTGACCGATCTTCAGTAAAGCGACACGTTGCAAATGTACACGGCGACACGAAAGACAAGCTCGAGGATAGCTATAAAGTCATGGCACCGGAAAAGTAA
Protein Sequence
MKEDQRYPDLTKICRLCLKVDSENIFQIFTVDESELSIPMRIMTCASLEVKAADGLPKQICYDCRYELEKSFLFRKRCQVSDSKLRKHIRLLSLGKKSRIFCKSDDDDDEEELEFEDSVLFLRDQDELKRRNAELWKAEYKLEMEELLVKQLEDAKADVKKELRGEVVDTVRDELRSRIQEEVRTELRCEVVNEVREQLQTEVKEECRKEQISVLLAEMEVYLSTKQAYESISIDNDGSEYNINEKDNAVYPVYLSAQKEIKRRRKRLLPTTPNSSEDENILTEPAAKKHNIMATNNDDDDAVTEKSIEQTVNDKIYMLDDNVQISKSIIAKQNQAAPEAINEVFDDVTDSNRITSYEIQENGEIHFCEKPLLLGSSTTSKNIKLETKTTSNMMLLDLGNEVVEFVNLDVGKSNTELQTNTANTSSDKMFAKIKPNNANSVESIDNFNFVTTVARRQTDTVKSFSCKLCPIEFSTETALRRHARSHQRTLEKGIHYQCPDCKLYLSCSSSLKRHMVIHTGEKPYGCNECGKTFVQREILKRHMDTHSGVRPYVCPHCKQGFAQKTNLVNHVNKLHLDQPKLHSCHLCTKKFTHASGLSRHLITHSGIMYQCTQCNRPFGDRSSVKRHVANVHGDTKDKLEDSYKVMAPEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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