Basic Information

Gene Symbol
Hivep1_1
Assembly
GCA_035044765.1
Location
JAWNNQ010001157.1:443514-451862[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00046 0.027 15.2 2.9 1 23 257 279 257 279 0.98
2 8 0.0054 0.32 11.8 4.5 1 21 285 305 285 309 0.89
3 8 0.31 18 6.3 0.4 1 19 1023 1041 1023 1044 0.93
4 8 4.2e-06 0.00025 21.6 2.0 1 23 1788 1810 1788 1810 0.99
5 8 1.4e-05 0.00081 20.0 4.0 1 23 1816 1840 1816 1840 0.92
6 8 5.9e-06 0.00035 21.2 2.8 2 23 2373 2394 2373 2394 0.97
7 8 2.6e-05 0.0015 19.1 0.8 1 23 2400 2424 2400 2424 0.92
8 8 0.0039 0.23 12.3 2.7 1 23 2445 2469 2445 2469 0.92

Sequence Information

Coding Sequence
ATGACGCTACAACATGTTGCACAAACAAGTGCAAGCgctgccgcagcagcagcagaagcagctgCAGCTAGTCTAGAGCTGCCAGCAGCAGCTGGCACACAACATGTGATGGATAGTGTAAACATTGCAGGTACCGCTTCCACTttagccgctgctgctgctgctgctgctgctgctgctgttgctgcagaaaGCAACAATGGCTGGAGTAATtccaaatatttgcataaaaagttCAAACGTCTCGCAAGTACAACCGAAATGGATGTTGTTGGCAACCCAGATGCTGCAGAATCAATGCTGCAACGTAAAATATCGCTGTCATCTGCAAGTTCAATATCGCCACCACCGCCGCAAGTGTCAATGCATGAGCTAAGCAATGGATATGCAGCGCAATTGAAGCAACAGTCGATTGAATTAAGTGCCAATTTTTTGAATAGTAATAATACGCAAATTGCTAACAACAGTCAACAGCAATATGCGCCTGGTGATAAGCCAACAAATCCTGTCAATCATGTCATATTGCCGACAACAATAATTGAAAGCAACAATAATGTTAAAAGTGCAAATAATGTATTAAACGTTCCTAGAACGCCGAACAGCAACATTAGTAATAGTAATTATGCTGCGCATGCAAATTTATCGCCGCCAACATTTGCGCAACATGAACTACAAACGCAAccaacgacagcagcagcaaccgcaACAGCCATAGTACAGCAGCAACCGAGTTCCACTGCTGATAAATCACTGCCGGGCGGTGGACGTCATGTGTGTCCGTACTGTAATCTTAATTGTACAAAGCCATCGGTGTTGCAAAAGCACATACGCTCGCATACCAATGAGCGTCCATATCCGTGCGATACATGTGGCATACGTTTCAAAACGAAGAGCAACTACTACAAACATTGCAGATCTCGTTCACATGCAGCGCGAAAGCGTGGCATTGAAATACCACCGGATGCGGATGATGGTCTCTATGGTGGTTCCGATCAAGAGCTGGACAATGAGTTGAGCAACAGCAGCTCAGAGTTGataagccgcACCGACTCACCAGTCGATGATGGTAGCAACCTATCGCCTGTAGTGTTGTTGCAGCAAACGACTATATCGCCCACTCCATCGCCCTCAACATTATCTGCAGCAAGAACAACTTATATGCAGCAACCTGCTCAACAACAGCCACAGCAATTGCCATTGGGTTCGCCTGCAGCTGGCACACTACCACCTACATCAGCTGTCATTGTTGGCTCTAATGGCAGCAACAGTAATGGCGGCATTAATCTTACTACTATGCAACATCGACATTCGATTGATTATAAGCCATATAAACCAAAATTCCATAATGCTGCATTATATGGGCCTGTTAAAGAGGGTGGGGCTGGCAAACAATTAGTACAGCAACAACTATCGCAATCTATTGttgaacaacagcagcaaattaTATTGCCTACTGCTGCGCATCATAATCATCAAACACAGCAGCAACCGCAACACCATCCGTCATTATCGCCTAGCACACAACTGAAGCTAAACAATCATATTAGCACGCATCAGTTGCAATTACAaattcaacaacagcaacatgttgctgcagctgccgccgctgctgctgctgctgcaaaccAACCGCTACTTATGTCCACAAGTCCCAGCACTTTACCTGCCGCTGCTGCGGGTGTTTTTTATCTTGGGCAGCCACCACCACCTGGTGCATCGGCACTGTTGCATCCTAGTGCACACATACCACCACCTCAGCACTATTATAGtccatctgctgctgctgcagcagttgTGGCACACCAACAGGCATTGGCATTTCACATGATGAcgccacaacagcagcaacagattCATCATCagttgcagctgcagcagcagtttcaatttcaacaacaacaacaacagcagcaacagcagcattcgACAATGCTAAAGAACTCAGCACCACAGCAACCGCTGCACAAACCACCTACGCAGCCGCCACCAGCTCTTCCACCAAGCGCGTCATCCCTGCCACAGCAAACAATGGCATCCAGTCCAGTTGGTGCACAGTCACAGCAGCAAACACAGTTGCATTATCTAACTACAGCAGCAACCACAGTTGCCACGACGTCGTTGCCATCTAGTGCCAACAGCACTGCAGCTACATCAGTCAATGCCCAGCCTGTAGCATCCCTGAGTACATTTGCAACAACAGCAGGCGGCATGCAAGTGAATGTTGAAAAAGTGCAAGAGCACATATCTAAACTTATATCACAGAATGAGGCCATAGTTGAGAACAAGGAGTTACTGCTACAAAAGAAATATCCGAAACAATTGAATCGTTCGCGTAGTTTTAACAATGCCAACAATAGCAATTCGGCTAACTTTTCCAATAGCGCTGGCAACAACGCGGTGCAGCCACCAAGTGAACGcgatacaaatgtaaaattggCGCAGGCGATTgtacaaaaacagcagcagcaacaaatacaacatcagcaacaaatgcaacagcaacaacaacaaatgcaacagcagcaacaacaacaacaatactatcaaatgcagcagcaactgttagcacagcagcaacaactacgTTTGGATGAAGCTGCAACACCGCTCCCGCCTCCGCCAAATGGTATCTCAAAACGTGGCACAGCCTCTTATACCAATGCTGTCAAGCCGCCAGCTCCACCAAAACAATTGCCACCGCCACTGCCGCCATTGCAACAACAGCCAATGCAACCGCAATACCGGTCTGATCCACAGCTGCAAGCTCAACTACCGATCAATGTGCTCGTGCCCAAATCGGAACTAGTATCAATACAGACGAATCAGGCCGGCAATTCTAACATGCCACTTAATTTGTCTGCCAAACCGAAGCAAATCGCTAATGCGAATACTGCATCAGTCAACAACAATACGCCAAAGAAACGACAGTCGATCGATTATCCTAATCCAAGTGTAACACCCACATCGTCAAGCAAGAATGTGCCGCCAAACAACTCCATAATAAAGAATCTGTTGCTGAATGCACGTGGTCTTGCAGTGCCCACTGGGAAAGGTGACGATGCTGTCTACTCATGTGCCAACTGCACTATGGAATTCCATACGGCGGAGGATTTAAAACTGCACAACAGCACATTTTGCAAGGGCGCCTCAACAAGCGCGTCCATTAGTCCCTGCTCTTCACCATCATCTAAATTCTTTCGCTCTAATTCGATCTCACTAACGCTGCCGGAATTGAAGAATCATTTTGCTTATGTGAAAAATCCAAAATCATTAGCGAAGCTTGCATGGTCGCAGCTTAAAACCAAGCCGAGTACATTGGTGCTTAATCAGTTAAGTGCGGTGCAGTCCCCGGCACGCACAAACATAACCACACCAACGACTACAACGGTGAGCACCACAAGCAGCACAACAGCACCAACTATATCACCGCCGGCTCCACTAAATACTAACATTGATCCAAGCATTTTACGTTTTGTCGATGCGCCACTGCCGTCACCTGGGCCACTGTTAGGGAAAACACCTTTAGTTGACTATAATCATCAAAGTGTGTCGCGTAAATCGGAGGATGTTGTCATTACCAAAATGCACGAAGACCGTCAATTTGGTAATGGTGATGGTCAAGCCACAGCGCCAAAACGCGCTAAGTACGATACGAATGCGATAAGTGTCAGTGAATTGTATGCACTCGGGCCAGCACCTAGCAGTGCCTcattttttagtaataaatccagcagcagcaacaacaacaacagcggtgGTGAAATGTTGGGATTAGTGAGCAATGTCAATGCCGCCAATGAATTAAAGAAGGAAGAGCGTTTGCGTCGTTTTACTTCATCCGGTGGCTCTATGATACCCATTTCTGAATGCAGCGAGGTAGATAAGAGTCCGAAAATGATACGAACACCTCTTCTTTCCGGTGGCAGTTTTCAGGAGGTCTCACCGAAATCAAAAGAAACAAAGGAACGAAAGCCAAATGATTTACTGAGCACATTCACATCAAAAGTCGGCAATACGTTTAACGCTCTATCCGGAAGCAGCAATAATGTTgtacaacattttcaatttccgCCAATAAACTCGATTACCGCATTTAATCCGCTGACACTGCCTCCAATGGTTAGTGGCGTAGAGAAAGCTATTCCATATGTGCCCGGTATACCAGGCCCCAACAGTCTAACGCCGCATATGCAATTGTTGCCACCGCCGCCACAACAACTACAGCTGCCACCACCTCCAACTCGTGGACGCAGTCCTAATCGCAAGCAACCCAGTCCGCTCTTACCCATGCATGTTAGCATCGATATGGGTAAACCGGTGACAGTAACGGCCGGTGAACTAAAATCCCTATCTCCGTTCGGGGGCGTAAAGAATGTACCCAGCGAATTCAGTCGACAGCCACCTACGCCGGCACAGCGTACTGCATTACAGTggaaaagcaacaacagcaatagtAATAGCTTGGAAGTGCCAAAGAAGTCCTTTAACTTTCAACGCATGGCTGACAATATCAGTCCACGCAAAAACTCTGCTTTACCGCCAAAACCTGCACTACCGACAGAACAGGAAACACGACActttaattttgataatataGTCAAGCCTGGCAGCGACTCATCTAAACTGGACACTTTAATCACTCCTCTCCACGTGGAAATGCCTGCTATTGCAGAGCCCGTGGAAGCTTCCAGTAGCAGTGATGCAAAGAAATCGAAATTTTTGCGACCCAGCAGTTTGCCATTAAAACCAGGTACGTTTACGCCGAAGCGACATCATGGCATAACACCCACGGCAAATACACTGCCACTTATCTCGCCGGAAACGCCACGTCCTTCCAAGTCGTGCGTGCAGCTGTATCTTAACGGACATGCCTACACATACTTGGGTCTCAAATGCAGCACAAAGATGTTTTATTGTACAGTAAATTGTCCGCAGCCTTCGTACGTTGCAGATATGCACAAGTTGTCCATGTATAGCGTGTGGCAGGTTTGCGCGGAAAATAATCCACATCCGCTGGGATTTAAACCAAAAGAGATGATTGCATTATATGATTCGCGCCAAAAGTCGATTACGAATACCATGGCAGGCAGCAATAATATGCAATATACTGTTGTCAAATCGCAACATTTGATTATGTATGCCAAGCCGAATGTCAACAATCCTGATGATTCTTTttatcagcatcatcagcaatCCACTGCATCTGCAGAAATGAATCCTTCGAAGTTATCGCCACAAGATGCTATCGATGCTAAAAAAGAACGCGGTATCGATGCTGTTGGAGGAAATGCACAGCTGCTGGTCGGTGGCTACGAGTCACACGAGGATTACACTTACATACGTGGCCGAGGACGTGGGCGTTACGTGTGCAGTGAATGCGGCATTCGCTGTAAGAAACCCTCGATGCTTAAGAAACACATTCGCACACATACCGATGTGCGGCCGTTTACTTGTAAGAACTGCAATTTCAGttTCAAGACCAAAGGTAATCTAACCAAGCACATGCAATCAAAAACGCATTATAAAAAGTGCATTGAACTCGGCATTAATCCAGGGCCAATGCCAGCAGATGGTGAATTTTTAGAGCCGGATGTGGAGTTCGATCAACAGTCGACTACTTCAGCCGGCGGACGTACCTCTTCTATGGCAGGCGAATCTGATTCGGACGACTTTAGTGACAACGAAACTGAAAGTAGTGACACCGATGAATCTAAATCCCGTTTGAAGGAGCACGAGGCAGCGCGTGGCCTGCTTTCTCTATCAATGACGCCACCAATACCACAAAGTGTCTCGCCGCAACTGTTAGCTACCTACCAAACAAATCCGAACAATGACTTTAGCACCGTACAGCCACCACCGCCAGCCAGTCCAGCAAATAGCGTAGGTTCCTCGGTCGGCTCGGCACCGAATGCCGTTAAGCGTGTTGTATCGTTTACGTCACCCAAACCGCCATTCGACTATCAAAAGCAGGAACAGTATTACTCAAACCCAGAGGAATCGAAAccaaaacgaatttcaagcaaCATCGCTGTCAGCGATGAAAGTGCACCAATGGATCTAACAAAACCACGTGCCACCGTAGTCCAACAACCACCGCCGCCAACATTAACACCAACGCCTTCGCCAACACCGTCGATAATGAATACAACACCAACCGCCATGCATGAGATGCCTTCGCACTCTCAAGCACAAATTCGCGATGTCATCTTTGGAAGTGGCACAAATGAATCAGGTTTTCTAAAGACTCTTATATTAGCCTCCGATAAGGTGCGTCTCTCTGCGGAACATGAAGCAGAAGAGTTAGCATCAGCAAAGGCCGCGGATGGAGCAGTCGCTTTCGAAGATGTGTTGCTGCAAACATATCTTAAAGAACAGGCATTGCATAATGCGCGCATGAAACAGTGCCACGTAGAACGGAACTTTGTAGAGAATGCTGCACAAAAATTAAGAAGTGTTACCACCACAACGTCATCATCTCCATTGGTTTCCTTGGCTGCAAGTACAGTTGTAACTTTTACAACTCTTGCTGCCAGTGGTAGCATTAGCAGTGTACAACTAAGTGTGGAACCGGTGAAGCCAGTACGCATTCAAACGCCACCGACACCTGCCATTGTAGTTGATGTGCCCAAAATCGAAGTACATGAAGCTAAAACACCAGAACCGCAAAGTGAGCCAGTTGGTGGCTCCTTGGATAGCAGTAGTAAAGCATTGACTGTTACAGATATTCCAGCTAGCAGCATGAAATTGAAGAACAAAGTTCCAGCCGCGAAAACAACAGATTCCGGCGAGGAGAGCGAAACTCAATCGGATGCAGAGACTCcaacgaaaatgaaaacagcAAACAAGCCGTCTGTGATTAGTGAACCACACAACGCAAATTTGCCTGCGGCTATTCAACAGCCCGATGCAACAGACTTTACTGGCGTATTAAGTGGTACATCGACGCGTGCTGTTGTCATTGGAGAAGAGGGTTTTAAAAGCAGTTCTGTGGTCAGCACTTCAATCAACACCGTCACTACAACTACAACCGCTTGCAACAGTAACGCCAACAAGGAAATACAACCCGTTTATCCGCGTGTGCCGCTCACAACTGCTAGTGCCAGCGATGCACGTCCAACTTGCACCATTTGCGGTAAGACGTTCCAGCGCCAACATCAACTGACGCTGCACATGAATATACACTATATGGAGCGTAAATTTAAGTGCGATGCTTGCGGCATCTCCTTTCGCACGCAGGGACATCTACAGAAGCACGAACGCTCAGAGGCGCACAAGAACAAAGTAATGATGACATCGACATTCGGCGTGCCGACCACTTCAAATCCACGTCCTTTTGAATGTACAGATTGTAAAATTGCATTCCGCATACACGGACATCTGGCCAAGCATCTACGATCTAAGACGCATGTACAGAAACTGGAATGTCTACAGAAGTTGCCATTCGGCACATATGCTGAAATTGAACGCGCTGGCATCAGTCTGACCGAGATCGATACAAGTGATTGTGATAATTCACTCATATCACTTAAACTACTAGCGCAACGCTTGCTAGAAAAAGATCCCGGCAAAATGAATAGTTACACATTGGCACAGGATAGCGCCAACTCGAATACGGGCATTGGTTCACAGGATAGTGCCTCTGAAGATGGCTTCAGTGCAGCAGCCAGTGCAGCCGCATCGGCGATTGCCTCACTGGACAATGATAGCGCGGCAAATACGCCACAGCGCAACAATTCCACATCAGAGGATGAAGCTATTTCGAACGGATTAATGCATAATCTCAAGCGTCGACTACCGGGCAGCTTTAGCAGCAATGGCGAAGAAAGCGACAACCAAACCGAAATACTAAACGATAAACGCGTACGTTTAGTCTCCGGCAGTGCAACGTCGCCACCGCCAAATGCAAATGCCTCACCAGCAGCTGCAACCAACTGA
Protein Sequence
MTLQHVAQTSASAAAAAAEAAAASLELPAAAGTQHVMDSVNIAGTASTLAAAAAAAAAAAVAAESNNGWSNSKYLHKKFKRLASTTEMDVVGNPDAAESMLQRKISLSSASSISPPPPQVSMHELSNGYAAQLKQQSIELSANFLNSNNTQIANNSQQQYAPGDKPTNPVNHVILPTTIIESNNNVKSANNVLNVPRTPNSNISNSNYAAHANLSPPTFAQHELQTQPTTAAATATAIVQQQPSSTADKSLPGGGRHVCPYCNLNCTKPSVLQKHIRSHTNERPYPCDTCGIRFKTKSNYYKHCRSRSHAARKRGIEIPPDADDGLYGGSDQELDNELSNSSSELISRTDSPVDDGSNLSPVVLLQQTTISPTPSPSTLSAARTTYMQQPAQQQPQQLPLGSPAAGTLPPTSAVIVGSNGSNSNGGINLTTMQHRHSIDYKPYKPKFHNAALYGPVKEGGAGKQLVQQQLSQSIVEQQQQIILPTAAHHNHQTQQQPQHHPSLSPSTQLKLNNHISTHQLQLQIQQQQHVAAAAAAAAAAANQPLLMSTSPSTLPAAAAGVFYLGQPPPPGASALLHPSAHIPPPQHYYSPSAAAAAVVAHQQALAFHMMTPQQQQQIHHQLQLQQQFQFQQQQQQQQQQHSTMLKNSAPQQPLHKPPTQPPPALPPSASSLPQQTMASSPVGAQSQQQTQLHYLTTAATTVATTSLPSSANSTAATSVNAQPVASLSTFATTAGGMQVNVEKVQEHISKLISQNEAIVENKELLLQKKYPKQLNRSRSFNNANNSNSANFSNSAGNNAVQPPSERDTNVKLAQAIVQKQQQQQIQHQQQMQQQQQQMQQQQQQQQYYQMQQQLLAQQQQLRLDEAATPLPPPPNGISKRGTASYTNAVKPPAPPKQLPPPLPPLQQQPMQPQYRSDPQLQAQLPINVLVPKSELVSIQTNQAGNSNMPLNLSAKPKQIANANTASVNNNTPKKRQSIDYPNPSVTPTSSSKNVPPNNSIIKNLLLNARGLAVPTGKGDDAVYSCANCTMEFHTAEDLKLHNSTFCKGASTSASISPCSSPSSKFFRSNSISLTLPELKNHFAYVKNPKSLAKLAWSQLKTKPSTLVLNQLSAVQSPARTNITTPTTTTVSTTSSTTAPTISPPAPLNTNIDPSILRFVDAPLPSPGPLLGKTPLVDYNHQSVSRKSEDVVITKMHEDRQFGNGDGQATAPKRAKYDTNAISVSELYALGPAPSSASFFSNKSSSSNNNNSGGEMLGLVSNVNAANELKKEERLRRFTSSGGSMIPISECSEVDKSPKMIRTPLLSGGSFQEVSPKSKETKERKPNDLLSTFTSKVGNTFNALSGSSNNVVQHFQFPPINSITAFNPLTLPPMVSGVEKAIPYVPGIPGPNSLTPHMQLLPPPPQQLQLPPPPTRGRSPNRKQPSPLLPMHVSIDMGKPVTVTAGELKSLSPFGGVKNVPSEFSRQPPTPAQRTALQWKSNNSNSNSLEVPKKSFNFQRMADNISPRKNSALPPKPALPTEQETRHFNFDNIVKPGSDSSKLDTLITPLHVEMPAIAEPVEASSSSDAKKSKFLRPSSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKCSTKMFYCTVNCPQPSYVADMHKLSMYSVWQVCAENNPHPLGFKPKEMIALYDSRQKSITNTMAGSNNMQYTVVKSQHLIMYAKPNVNNPDDSFYQHHQQSTASAEMNPSKLSPQDAIDAKKERGIDAVGGNAQLLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCKNCNFSFKTKGNLTKHMQSKTHYKKCIELGINPGPMPADGEFLEPDVEFDQQSTTSAGGRTSSMAGESDSDDFSDNETESSDTDESKSRLKEHEAARGLLSLSMTPPIPQSVSPQLLATYQTNPNNDFSTVQPPPPASPANSVGSSVGSAPNAVKRVVSFTSPKPPFDYQKQEQYYSNPEESKPKRISSNIAVSDESAPMDLTKPRATVVQQPPPPTLTPTPSPTPSIMNTTPTAMHEMPSHSQAQIRDVIFGSGTNESGFLKTLILASDKVRLSAEHEAEELASAKAADGAVAFEDVLLQTYLKEQALHNARMKQCHVERNFVENAAQKLRSVTTTTSSSPLVSLAASTVVTFTTLAASGSISSVQLSVEPVKPVRIQTPPTPAIVVDVPKIEVHEAKTPEPQSEPVGGSLDSSSKALTVTDIPASSMKLKNKVPAAKTTDSGEESETQSDAETPTKMKTANKPSVISEPHNANLPAAIQQPDATDFTGVLSGTSTRAVVIGEEGFKSSSVVSTSINTVTTTTTACNSNANKEIQPVYPRVPLTTASASDARPTCTICGKTFQRQHQLTLHMNIHYMERKFKCDACGISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCDNSLISLKLLAQRLLEKDPGKMNSYTLAQDSANSNTGIGSQDSASEDGFSAAASAAASAIASLDNDSAANTPQRNNSTSEDEAISNGLMHNLKRRLPGSFSSNGEESDNQTEILNDKRVRLVSGSATSPPPNANASPAAATN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-