Lmon009457.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucophenga montana
Gene Symbol
RREB1
Assembly
GCA_035044765.1
Location
JAWNNQ010001262.1:56558-64171[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.0094 0.55 11.1 0.6 1 21 181 201 181 203 0.96
2 13 0.00014 0.0084 16.8 0.2 1 23 213 235 213 235 0.98
3 13 3.8e-05 0.0022 18.6 7.5 1 23 241 263 241 263 0.98
4 13 6.3 3.7e+02 2.2 0.1 2 23 538 561 537 561 0.91
5 13 0.088 5.2 8.0 1.3 2 19 567 584 567 584 0.98
6 13 0.00042 0.025 15.3 0.1 1 23 820 842 820 842 0.97
7 13 3.1e-05 0.0018 18.9 1.2 1 23 852 874 852 874 0.99
8 13 0.0013 0.079 13.7 2.0 1 23 880 903 880 903 0.97
9 13 0.0048 0.28 12.0 2.0 1 23 1271 1294 1271 1294 0.95
10 13 0.00014 0.0082 16.8 0.3 2 23 1677 1698 1676 1698 0.97
11 13 0.23 14 6.7 6.3 1 23 1704 1727 1704 1727 0.97
12 13 0.014 0.8 10.6 0.5 3 23 1931 1951 1929 1951 0.96
13 13 0.0021 0.13 13.1 4.8 1 23 1957 1979 1957 1979 0.99

Sequence Information

Coding Sequence
ATGCGGCTCACACGTGACACCGACGAGGATGAGGATGAACActatgacgacgatgatgatgaggatgaagaGGACTGCTTTGATGAGCATGAGCGTAAAGAAGACCATAAGTCAGTGTTATtggtgcaacaacaacaacaacaacaacaacaacagcgcacACACAAACGTCGTATCAGCAACACTGCACGTCGCTCCTCCTCATCCACCGGTTCTGCTATGGTTCAGCTGGTCGCTGATGAAGCGGGTGGCAATTCACTAcgcaaaaaatttcgttttaatcgcagcagcagcagcggtggcCACAACAGTGAAcaacatcatcataatcatcgcCATCATCAGCATAGCAACAACGAGTCGGGATTTGTGGATGCCAGCGGTAATAGCAGTCAGTATTTATTAAATGCCACTGCTACGAATGTGCACAGTTCATCTGGTTCAGCTGTATCATCGGCGGGTTCATCTCCGCATAATGCAGTCTCTAGTCCTGAATCGTCACTGGCTGCTGTTGTTAACGCTGGCGATGAACACATGAAATACGTGTGCCCCATATGCGAAGTGGTTTCAGCGACGCCGCATGAATTCACCAACCACATTCGTTGCCACAATTATGCCTCTGGTGATACAGAGAATTTTAcatgcaaaatatgctcaaagGTGCTCTCATCGGCATCATCGCTGGATCGTCATGTGCTTGTGCACACCGGTGAGCGACCCTTCAACTGTAAATACTGTCATCTAACCTTTACAACCAATGGTAATATGCATCGTCATATGCGCACACACAAACAGCATCAGCAAAATCATCATCAACGCCGTAACTCGAATGGAACAAAGAATAATagtagcaatagcagcagcaatggcagcagcagcaatggtaACAGCAACAGCGGTAATGCGTTGGCGCCTGGTAGTGGCAGTGAAGGTGTTAAACAGGCGGCGACGGCAGCGATAGCAGCTTGGTCTGTGGCAACAGCGGCAGCGGTGGCAGCTAATGGTGGAGGTGGCAAGCGTCGTTTAAATGGCTGTACTAGTGGCGGTAgtggtggtgctgctgcttctgctgccgATGGcgatggcggcggcggcggcggcggcgtagGCGGTGTAGAAAGTTACGAAAGTGATGGCAGTTGCTCAACAGATTCAACAAGTGCCAACAGCCAAAGctcaaataataacaacaacaacaaaaataataatcataataccaacaacaatttaaagcGCAAAAAGAGcgatcagcaacagcagcagccgtcAGCGCATGATCTCTTGTTGGATGTAGcagcgaacaacaacaacaacaacaacaataacaacaatactaCCATCGAAGCCGAAATTGCTACTGCTCCGAACGCACACTTTAACGATGATGAGCTTGTACTGATGAAGCATCGACGCGTGAAGACCACAATTAACAATAACATAATAGCAGCTGATACAGCCACCGCCGACGATGTGGATACCGACACTGATGCTGATATAATCACTAGCACACCTGATGTCGCGACTGTCGCTGCCGGCGCGGAACAGGAAACCAATTCCGATATGGACGATGTGGTTGCACCGCGTGATACAATGGTTGATGCCAGTACGCTATCATGTCCTGTATGCAATGTTACGGATTTTGAGTACATGCGTGATCTTAGCGAGCATATGGACAGCGCACATGCTGAGATACCAGCAAAATGTCGCGATTGTGAAGTAGTGTTTCGTACGCATCGTCAACTCAATACACATCCATGTACACAGAAGCTAAAAACAGCTGTAGCTGTGGCTGCCGCGGCGGCAGCAGCGGTTGGCATATCGCCACCAGACTTTGCAAATTCATCGCGTCAACGACATCGACAACGTCAGCAACAGTCACAGTCACAGAAGCGACACCGACAAAATGAATATTCTTTGGATGCCGCAGAGCATATAGGTGACGAGCAAGCTAgtggtggtgatgatgatgatgaggaagaTATCGTTGATGAGGCCGCCATAGCTGTAGCAGATGACGATGGCGACGAAGATGTGGATGACATCGAATATGATAGCATGGAACGTGATGTTACCGCTGATTTACAACGACGCGAGCAATTGTTTCGTCAGTTGTATTTGAAGAATAAAGCAACAGCGGCAGCCGTGGCTGTCACAGCAGCAGCTGAAGCTGGTAGCAGTGTCGTTGGTATGCTCTCACCTATCTACAATGATGAGCGCGAATACGATGCTTTGCTCAAGTATGAGGCTGCGGATACGAAGCATTCGCATGACTCCAAAGATCTGGCCGACATtcagtcaatattaaatatgaCCTCATCGTCGTCAACATCGAATTTCCTTAAGAATTTCGAGCAATCGGTTAATACACCGTCGAGTAATTACAGTGTCGATAAGGATGAGGAAGAGGCGCAGGACGCATTCACCTCGGAATTTCGCAAAATGAAAATGCTCGGTGAATTTCCATGCAAACTGTGCCCGAAAGTATTTCCCAATTTGCGTGCGCTCAAGGGCCACAATCGTATACATTTGAGTGCTGTCGGTCCAGCTGGACCGTTCCGCTGCAATATGTGTCCGTACTCGATCTGTGACAAGGCAGCGCTGGTGCGTCATATGCGCACGCATAACGGCGATCGGCCATATGAGTGCGCCGTCTGCAATTATGCCTTTACCACAAAGGCCAACTGCGAGCGCCATTTGCGTAATCGTCATGCAAAAACAACACGTGATGAGGTCAAGCGTGCCATTATCTATCATCCGTCGGAGGATTCGTCGTGCGATGATCcggttaaaaaattacatttgttcGCCGGTTCGTCTGATTTTGATGATGAGCTGGAAATGTCTGGTTACCAGTCCCAACATCACGTACCGCAGGATCGCTCAACGCCAGTTTCGCATTTAAAGGAGATGCTGTTGGGCGACAATCATTCGAAAGCATCGAAGCCTATGAAGATTCAAGTGAAAAGTTTAGAGCAGCTGCTCGATAAGACAACTGTGTACAATGATTCATGCAATCAATCCGCTAGCAGCGGATCTGGTACCGGTGGAGAAACAGCACCCATTGATCTCAGCATGGATGTGCTGGACCTAAGCAAAAAGCCCACTGGCAGTAAGTCTAAGTTGAACACAAGCGCAAGTGAAGTACACGATGTGCACGCCGCATCTACTGCTGTGGGTATCGTACAGGAACAGCCGGAGAATTCAGCAACGCTGACTGATCCGAAATTCGATCTGGATAAGAACCAACAATTTTTGctcgcacaacaacaacagcttttAAACGATGCCTTCCCCAAGACACTGGTCGATCCGACACAATACTTACATCAGCTGTATCGCAACCTTGCAATATTTCAGCCGTTGAATCCGTTCTTCATGCAAAACTCATTTATGCCCGCCCAACTTAACGATCTGCAGAAATATGCACCGCTTATGAATCGTTTATTTGGAGCTGGTGGCGCTCCAGGTATGACACCTGGAGGCATGCCACCCCTACCTGGTATCGGTGATGTCAGCAAGCAACGCAACAGCACTCCCAGCCCTGCAACCACTGCTTTACTGCCCCAAATCAGCCCACTCATGTCGGACAAGTCATCGAGCACGCCGTCGATGTCTTCAGTGTCGCCCAGTTCGATTGCACAATTGTTGCCCAAATCGTTGGCTTCGCCCGTATCGAGCAGTGCTCTCAATATACCACGTCATCCGCACATGCCGCCCACTGTACTACCTGGCGGCCCAGTTAAGATGGTCATCAAGAATGGTGTACTTATGCCTAAGCAGAAACAACGTCGTTACCGCACCGAACGTCCCTTTGCATGTGAACATTGCTCCGCGCGTTTTACGCTGCGCTCGAATATGGAGCGTCACGTGAAGCAGCAGCATCCCCAATTCTACGCACAACGTCAGCGCAGCGGCCACCATGTAATGCGCGGTCGTGGCGCCAGCAGTGCAGCTGCAATGAATAGTTTTAATCATATGCATGCCTTTGCCCAGGCCGCTCAAGCgcaacatcagcatcagcacAATTCACACCACACGCATTCACATAGTAATGGTGGCGGCAGTGGCGCTGTTGGAAGCATGGGCGCTGCTCCCATCTCCGAGCAAGTGAAATACGCTATACTGGCTCAGCAGCTCAAGGCACGCAAGGACACAGATCTGTTGCAGCAGGCACTAGCGCATGGCTCGAGTAGCGTAGCACCCAATCATCTGTTGCTCAGTGGCAGTGGTGGCGGGGGATTGCAACAGCATCACGCACCGCAGCCACACTTTCATTTCGGCCAAATGAATGGCAATGCAACGATGACGGCATCATCCATAGCAGTCAATGGAGCCATGGAGGATGATGAACCAAAATTGATCATCGATGAGGATGAAGATGACGACGTAGAGCCATTGGATGACGATGTAGAAGATTACGTCGACGATGAGGAGGACGAAGAAGAATTGAACATGCATGATAGCAACGAAGGTCGTATTCATGCGCTATCGAATGATGAAGAAATGGAGCGCGAGCAACTCGAACGTGTAGCTATGCCTAAGCCGATCGAAGAGATAAAAGCCAAGCCACAACCAGCGTCAATAGAATCCAATAAAACAGGCAAAAAGGTGGCTGAGACCATTTTAGAGCATGCCATTAAATCTGGTGGCCAATCAGCGCCAAAGCCACAGTCAAGCGAAATACCAAATACACCAGCTCCAGCGGCGCCGGCAGCTATGAAGTCGATGATTGCACAAGCCGAATCTGTTGGAAAGAGTCTTAAAGAAGTTGCTAGTTCGTCATTCAAAGACGAATCTCAGGATTTGGTATCCGTATCGAAGCTTGTTGACAATGCAACTAGCAATCAGATGACCTTCAACAATTACTTCCGTCCCAGTGATGTAGCTAATCATATGGAGCAGAGTGACGAAGAGGGACTTGTTGCATCCGGCAGTGCCAGCGAGAGCAACAACTCCGGCACCGAAGATGTCACCACACCGGCCGAACCCAAAAAGAAGTCCGCTTACAGTCTGGCACCGAATCGCGTTTCCTGCCCGTATTGTCAGCGTATGTTCCCCTGGTCAAGTTCGCTGCGTCGTCATATACTCACGCACACCGGTCAAAAACCGTTTAAGTGTTCGCACTGCCCATTGCTCTTTACGACAAAGAGCAACTGCGATCGTCATCTCTTGCGCAAGCATGGCAATGTCGAATCAGCGATGTCCGTGTATGTACCAACAGAAGATGTCACCGAACCAATACCGGTGCCAAAGTCAGTTGAGGAAATTGAGCAGCAACAGCGTCAACGTGAAGAGGAGGAACGTCGCCGTAAGGCCGAAGAAGCGCAGCTGGAACGTGAGCGCCGCGAACTTGAAAAACGACGCAAACAAGAGCAAGAACAGCGTGAACTACTGCTCAAACAGATGAGCGCACAGTTCAGTCTAAACCAGTTGAGcgcagctgcagcagcggcCGCCGCACTTGGCACCAATAATAACGCTGTTGCTAAGCCAATTGATGCAACTTGTCCTGCTGCTGCCGGTGATCTGCCATACAAGTGTCATTTGTGCGAGAGTTCGTTTGGTGAGCGTACGCAGTGTCTGGGACACATTAAAGAACAACATGCGCAAGAGTATACATTGCTATTGGCCAAAGGTGCACTCGAAACAGATGTCGAACCGCAAATGCTGCACACAGTTGCGGCGGTAGTAATCGATGAGGATGAAAATGAAGCTAATGGTGTCGCAGGTGGCACTGCCACTGGCAAGACAACGGGCAAATATCCCGACTATAGCAATCGCAAAGTTATTTGTGCCTTCTGCGTGCGTCGCTTTTGGTCTACCGAAGATTTGCGACGCCATATGCGCACACACTCCGGTGAGCGTCCATTTCAATGTGAAATTTGTCTACGCAAGTTTACGCTAAAGCACAGCATGTTGCGTCACATGAAAAAGCATAACGGACGTCAATATAATGGTGCCAATGGATTAAGTGGCGATCATGCCGGTGCTGGTAATTCTGGTTCTGATTTTTCTGATGATGAACAATTGTCAACAACACCGGCTGCTACACCACCACCGTCATTggcgccgccgccaccgccgccgccaccaccaccggcACAACAAGCAACATCGACGACAACGATGACGTCTACGTCGATGGCAACAACAGCTGGTGGCAgtggcagtagcagcagcaacaacaacaacaacaacaataacagcaataaaaactttgctgctgctgctgctgttgctgcaatgCATGCACCCAAAATTCAAGAACTACTCAGCAAGGCCAACGAATGGCGTGCCAGTCATCTATCATCAACACTCGGTGAGCACAAGGAGAACATTGCCGCAGATGCTACCGAACATGGCAACCAAAGTGCACCGGCAAGCAGCGATCTTATTGGCAATCTACTGGGTATCAGTGATCAGGGCATTCTGAACAAGCTACTCTCATCTGCCGATGAAGCTGCCAAGTTATTGGGCGTTGAAAAGTGA
Protein Sequence
MRLTRDTDEDEDEHYDDDDDEDEEDCFDEHERKEDHKSVLLVQQQQQQQQQQRTHKRRISNTARRSSSSTGSAMVQLVADEAGGNSLRKKFRFNRSSSSGGHNSEQHHHNHRHHQHSNNESGFVDASGNSSQYLLNATATNVHSSSGSAVSSAGSSPHNAVSSPESSLAAVVNAGDEHMKYVCPICEVVSATPHEFTNHIRCHNYASGDTENFTCKICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQQNHHQRRNSNGTKNNSSNSSSNGSSSNGNSNSGNALAPGSGSEGVKQAATAAIAAWSVATAAAVAANGGGGKRRLNGCTSGGSGGAAASAADGDGGGGGGGVGGVESYESDGSCSTDSTSANSQSSNNNNNNKNNNHNTNNNLKRKKSDQQQQQPSAHDLLLDVAANNNNNNNNNNNTTIEAEIATAPNAHFNDDELVLMKHRRVKTTINNNIIAADTATADDVDTDTDADIITSTPDVATVAAGAEQETNSDMDDVVAPRDTMVDASTLSCPVCNVTDFEYMRDLSEHMDSAHAEIPAKCRDCEVVFRTHRQLNTHPCTQKLKTAVAVAAAAAAAVGISPPDFANSSRQRHRQRQQQSQSQKRHRQNEYSLDAAEHIGDEQASGGDDDDEEDIVDEAAIAVADDDGDEDVDDIEYDSMERDVTADLQRREQLFRQLYLKNKATAAAVAVTAAAEAGSSVVGMLSPIYNDEREYDALLKYEAADTKHSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSVDKDEEEAQDAFTSEFRKMKMLGEFPCKLCPKVFPNLRALKGHNRIHLSAVGPAGPFRCNMCPYSICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDPVKKLHLFAGSSDFDDELEMSGYQSQHHVPQDRSTPVSHLKEMLLGDNHSKASKPMKIQVKSLEQLLDKTTVYNDSCNQSASSGSGTGGETAPIDLSMDVLDLSKKPTGSKSKLNTSASEVHDVHAASTAVGIVQEQPENSATLTDPKFDLDKNQQFLLAQQQQLLNDAFPKTLVDPTQYLHQLYRNLAIFQPLNPFFMQNSFMPAQLNDLQKYAPLMNRLFGAGGAPGMTPGGMPPLPGIGDVSKQRNSTPSPATTALLPQISPLMSDKSSSTPSMSSVSPSSIAQLLPKSLASPVSSSALNIPRHPHMPPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSAAAMNSFNHMHAFAQAAQAQHQHQHNSHHTHSHSNGGGSGAVGSMGAAPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSVAPNHLLLSGSGGGGLQQHHAPQPHFHFGQMNGNATMTASSIAVNGAMEDDEPKLIIDEDEDDDVEPLDDDVEDYVDDEEDEEELNMHDSNEGRIHALSNDEEMEREQLERVAMPKPIEEIKAKPQPASIESNKTGKKVAETILEHAIKSGGQSAPKPQSSEIPNTPAPAAPAAMKSMIAQAESVGKSLKEVASSSFKDESQDLVSVSKLVDNATSNQMTFNNYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTTPAEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVTEPIPVPKSVEEIEQQQRQREEEERRRKAEEAQLERERRELEKRRKQEQEQRELLLKQMSAQFSLNQLSAAAAAAAALGTNNNAVAKPIDATCPAAAGDLPYKCHLCESSFGERTQCLGHIKEQHAQEYTLLLAKGALETDVEPQMLHTVAAVVIDEDENEANGVAGGTATGKTTGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGRQYNGANGLSGDHAGAGNSGSDFSDDEQLSTTPAATPPPSLAPPPPPPPPPPAQQATSTTTMTSTSMATTAGGSGSSSSNNNNNNNNSNKNFAAAAAVAAMHAPKIQELLSKANEWRASHLSSTLGEHKENIAADATEHGNQSAPASSDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00890397;
90% Identity
-
80% Identity
-