Basic Information

Insect: Leucophenga montana
Gene Symbol: -
Assembly: GCA_035044765.1
Location: JAWNNQ010000408.1:1933071-1937752[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0003 0.018 15.8 0.2 1 23 221 243 221 243 0.97

2 10 0.0094 0.56 11.1 5.6 1 23 249 271 249 271 0.98

3 10 1.3e-06 7.9e-05 23.2 1.8 1 23 277 299 277 299 0.97

4 10 0.00038 0.022 15.5 0.2 1 23 305 327 305 327 0.98

5 10 1.5e-07 8.9e-06 26.2 3.7 1 23 391 413 391 413 0.98

6 10 2.7e-05 0.0016 19.1 0.7 1 23 419 441 419 441 0.98

7 10 0.59 35 5.4 0.1 1 21 447 467 447 469 0.89

8 10 1.6e-06 9.4e-05 22.9 1.6 1 23 502 524 502 524 0.97

9 10 4.5e-05 0.0026 18.4 2.5 1 23 530 552 530 552 0.98

10 10 0.00024 0.014 16.1 1.4 1 23 558 580 558 580 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0003	0.018	15.8	0.2	1	23	221	243	221	243	0.97
2	10	0.0094	0.56	11.1	5.6	1	23	249	271	249	271	0.98
3	10	1.3e-06	7.9e-05	23.2	1.8	1	23	277	299	277	299	0.97
4	10	0.00038	0.022	15.5	0.2	1	23	305	327	305	327	0.98
5	10	1.5e-07	8.9e-06	26.2	3.7	1	23	391	413	391	413	0.98
6	10	2.7e-05	0.0016	19.1	0.7	1	23	419	441	419	441	0.98
7	10	0.59	35	5.4	0.1	1	21	447	467	447	469	0.89
8	10	1.6e-06	9.4e-05	22.9	1.6	1	23	502	524	502	524	0.97
9	10	4.5e-05	0.0026	18.4	2.5	1	23	530	552	530	552	0.98
10	10	0.00024	0.014	16.1	1.4	1	23	558	580	558	580	0.96

Sequence Information

Coding Sequence: ATGAGTGCGTTAAATCAAGACTTTTCCTTAACATGTCGTTGCTGCAAACGCTGCGAAAAGGACGAGGCGCAGGATACGCTAAAACTTCAATCGCTTTACGATAGTCCGACAGGAGCAATTTGTGATCTGAGCATTGCGGAGATTGtgctacaaatacaaaacttcATGGAGATGTGTGTTGAATCGGACAGAAACATGAGAGGCCTAACTAAAAATGATCAACAAAAGCAAACAGACGAAGTTTTGGATAAGAAGTATAACTATGCTGATACAACATCGATGGTTAGCTGTGTGACGATAGTAAAAGAAGAGGTAGAGTTTCAGGAAGATAGTGCATGGACGGAAATGATACAGGAGGATAATGAATTGACTGAACAGTTAATTAAGTTGGAACCGATGGACGATGAATTTGAGACAGCAAATTATACTGCAACGCAAGAAACAGCAACGACTTGCTCCAAAATAAATGTCAAGAATGAAGCATTGGACAACGATTTATTTCCGGACACAAAAACCGACAATTCCATTGTAAATGGTAACGAACAGGCGGACACTGTTGATAGTAATGAGAGTAGTGATTTTGAATTTGATCCAACAGAAGAAACGTCAACTAAAAAACTTCTTGGTGAACATATGGTCTGTCACGTTAGTGAAAAGAACTTTATATGCGAAATCTGTGGCGCAGCATTTAAAGGACGCCGTCAGTTGCGTGGTCATAAAATGAAACACATCGAAGATAAGCGACATAAGTGCGACTATTGTGAGAAGCGTTTTCATTGGGCTAAAAGTATGCGTGAGCATATGCGAACACATACGGGAGAGAAACCGCACATATGTAAATACTGTGAACGTGCTTTTTCCAGCCGATCCGCACTTATCAAACATCTTCAAACGCATCTTGGTactgaaatatataaatgtgaactttgtCCAAGTGCCTTTCGCTTGGCTTCAGAACTGCGTCAACATTATACGGTACATAAAACAAAGCCAACTGAGACACGCGAAAGAATTCCAGCCGGAAGACAGGAGAAAGTCGCCGAAATCAAATTGGAACAATTACCAACGAATGAGGAAGTTAATGCGGAAAAAAAGGACATCTGTGATAAGCGtttaattcagCACAAAGATTTGAGCAGTCGCATAGAAAAATCCACAAGCGAAAGCCCATATAAATGCGATATCTGCGATAAGCGTTTTTCCCATAACTCTAAATTGCGCACGCATATGAGTGTACACTCCGACGAGAAACCGTTCAAATGTGAATATTGCGCACGTTCTTTTGCACTTAAAGTTACTTTAATGAAGCATATTCGTTTGCATCTTGGTGATAATATCTATATGTGCGAACTTTGTCCCAGTAGATTTCGACTCATTGCCGATATGCAAAAGCACAGTGTGGAACACAAAAACGAGAGTGCCGAAACGCGAGAAAGTAATTTAGCTGCGCGAAAAGCTTATCAGTCAAAGATGCATAAAATTCACCATCCTAGGGAAAAACCACATGCCTGTGAATATTGTGACAAGCGCTTCGCGGAAAACATAAGTTTACGCAAccacatgcgaacacacactgGTGAGAAGCCGCATAAGTGTCAATATTGTGACTACACTGCCACAGTAAGTTCCAATTTAATCACGCATCTCCGCAAGCATCTTGGCGATGATGTCTACAATTGTGAACTTTGTCCACGTGGCTTTAAATTAGCCTCACATCTGCGGAATCACTATACAGAACATAATAATGAGGATACTGAGAccaaacaaagaaatttagctgcaagagaagaaaaaattgcaCAACTAAAGTTAAAGTTGAACACTTCGGCAGCGACAGCTAGTGTTAAAGATGTCAGGGAGGAGAACGTTTAA
Protein Sequence: MSALNQDFSLTCRCCKRCEKDEAQDTLKLQSLYDSPTGAICDLSIAEIVLQIQNFMEMCVESDRNMRGLTKNDQQKQTDEVLDKKYNYADTTSMVSCVTIVKEEVEFQEDSAWTEMIQEDNELTEQLIKLEPMDDEFETANYTATQETATTCSKINVKNEALDNDLFPDTKTDNSIVNGNEQADTVDSNESSDFEFDPTEETSTKKLLGEHMVCHVSEKNFICEICGAAFKGRRQLRGHKMKHIEDKRHKCDYCEKRFHWAKSMREHMRTHTGEKPHICKYCERAFSSRSALIKHLQTHLGTEIYKCELCPSAFRLASELRQHYTVHKTKPTETRERIPAGRQEKVAEIKLEQLPTNEEVNAEKKDICDKRLIQHKDLSSRIEKSTSESPYKCDICDKRFSHNSKLRTHMSVHSDEKPFKCEYCARSFALKVTLMKHIRLHLGDNIYMCELCPSRFRLIADMQKHSVEHKNESAETRESNLAARKAYQSKMHKIHHPREKPHACEYCDKRFAENISLRNHMRTHTGEKPHKCQYCDYTATVSSNLITHLRKHLGDDVYNCELCPRGFKLASHLRNHYTEHNNEDTETKQRNLAAREEKIAQLKLKLNTSAATASVKDVREENV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -