Basic Information

Gene Symbol
hang
Assembly
GCA_035044765.1
Location
JAWNNQ010002085.1:247719-270362[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.097 5.7 7.9 1.0 2 23 248 270 248 270 0.94
2 19 0.033 1.9 9.4 2.6 3 22 376 395 374 395 0.90
3 19 0.0074 0.44 11.4 5.3 1 22 481 502 481 504 0.90
4 19 6.3 3.7e+02 2.2 0.0 2 21 516 535 515 536 0.92
5 19 0.0018 0.1 13.3 0.2 3 23 646 667 645 667 0.96
6 19 0.00037 0.022 15.5 0.1 1 23 675 698 675 698 0.96
7 19 0.00052 0.03 15.0 0.1 2 23 791 812 790 812 0.97
8 19 0.00061 0.036 14.8 2.5 2 23 893 915 892 915 0.95
9 19 0.032 1.9 9.4 0.8 2 23 924 946 923 946 0.95
10 19 0.05 2.9 8.8 0.1 1 23 959 982 959 982 0.97
11 19 0.00019 0.011 16.4 1.1 1 23 1038 1060 1038 1060 0.99
12 19 0.0029 0.17 12.7 0.9 1 23 1068 1091 1068 1091 0.96
13 19 0.24 14 6.6 0.2 2 19 1099 1116 1099 1117 0.94
14 19 3.2e-05 0.0019 18.8 0.3 3 23 1209 1229 1208 1229 0.98
15 19 0.0026 0.16 12.8 0.7 1 23 1264 1286 1264 1286 0.97
16 19 9.7e-05 0.0057 17.3 0.9 2 23 1377 1399 1376 1399 0.93
17 19 2.1 1.2e+02 3.7 0.2 2 19 1419 1436 1418 1438 0.92
18 19 0.92 54 4.8 1.0 3 23 1454 1474 1454 1475 0.94
19 19 0.0019 0.11 13.2 0.3 1 23 1824 1846 1824 1846 0.97

Sequence Information

Coding Sequence
ATGTCGGAGGAAAATCTGCTGCGTGCGCGACAAAATTGCTGTCGTCTGTGCCTCGCACCGCAAACCGAATGCATTTCAATTGTCAATAGCTATGCCGCCGATCGTGAACCACTGGCCacaaagatacaaaactgcGTCAACATCAAGatCACAACCAATGATCGTCTATCAATGTATATATGCCACGCTTGCATCAGCTATCTAAATTCGTGGCAAAGTTTCAAAAATCGTTGCCTTTCATCGCAGAGCAAGCAGCGCAACTGGCTTGACgcaaacaaacagcaacagctgCTGGACAATAATGTTAGCATCTCGGAGGTCAACAATGTTGCCACAGGTGGCAATAACAATAATAGCAGCGGTAAAGGCGAGAATGGAGAACAACAACAGGACGACCAACAGCAACAGGAACCAACGGATAAAACATCGAATATATTGGAGGGCATAACATCGCTGAAGAAACGCAAATCATTAACAGTTTATCCTTTACCAGCGGTGCCCATAAAGGATGAGCCAGTGGATAGTGATGAAGATTATCATATGCGACATCAAGATGAGTCTGATGAAATGGTTGATCCAACACTGTTTCTTGAACGCACAGAACACGAAGGCGATGCACCTATTATGGACGACAGCTACGACTATGGTGCGCAACGTAatacagctgctgctgttgcggctGCATCGTTGCCACCCGCTACAGTAGCCAATGTGGCTGCTGCAGGTGACTTAAAAGTTGCACAATGTCGCGCATGTAATCTCCAGTTCTCCACACGTGCCAACGCACGCCGGCACGAGCGTAATTTGCATCCAAATCTGTTTGAATTATCCACCGCTTCACCAAATAATACACCTGTTACAAAACCAACACCAGCACTGGCCGCAGCACTTGAGTTGCAGCGTGCTGCAGCCGCTGCTGCCACGATTGAAGCCTCCAAGGCGGTAGCTAGTGGCAGCATTAGTGCACAAAAGTACCGGCAGGAGGTCATGAATGCGTTCAACAAATGCGAGGGTGGCGGCTATGATTATGAGAATCCGGAAAAATATCAACATCTGCTTAACGATGATAAAATCGCTTTTATACAGCAGAACTGCGAATTTCTAGATCAATATCAAAATATGACCTGTCGTTGCTGTAATAAAGCATTCAGcacgtataaaaattttatggcaCACATACGCAAAAAGTATAAGACACTGCCACGAAATTTGTGCTTCAATTGTTTGAAGCAAAATGAATCGAAATCACTGTTCATTTCGCATTTGAAGAAGCGCAGTTGCATTAATTTATACAGACTATTGAATAGCCTCGCtactaaaaatccaagtttttCGTCGGGAGTCATTGCTGCGCCACGCTCAAAGTCAGCGTCGGTGGCGTCCACCAAATCAGCAACGCCAGAAGGCATGCGTGCCAAGGAACTtcttataaacaaaatgtacGAATGCAAAATATGTCCACAACAATTTCGCACAAAGCACGAGTTCCGAACGCATGTTTACGACTGCCACGCTGATGTGCCGCGCAAGGACAATGCCTCGATACAGTGCAGTTTTTGTGGCTTGGAAATAATCGATCCTGTAGATCGCAAGCGACACTACAATAATATGGACTGCATCGTTTCACTGCGTTGCGTCACGTGCAAAGGCAAGTTCGATAATCATCAACGCTTTCTGGATCATGTTTATCAGGAGCACTTGGGGAACGTAAGTGATAATTCGTCGACATTGAGTGGCGCAGTGGCGCGCCATAAGAGCACGGAAATATCACCCGGCAAACAAAATGTCAGCACAACTGGTGGTGGCGCTTCATCCAATGATGAGTCACACAGCAGCGGCGTGGCGCTCACATCGACACCAGCCGCCGCTGCCGGTGGCGCTGCAAGTCAAGCTCCTGCCGCCAAATCTCAATATTTTTCGCGTATGCCTCAAGCTTGCCCAATTTGCGGTCAAcaatacaacaactacaacaacgtATTGCGTCACATGGAATCAAAGCATCCAGACAAACTGCCCGAGACGTACAAGTGCGTTAGCTGCGGCGCCGGTTTTCCGCGAATTTCCAATTTACGCGAGCATATGCTCAACGTGCATGGCAGCGATCGAAATCGCGTTTCCGGTGGGTTCGAGTATATTGTCAATGCTGATGCGCTTAAACTACTCGACACCGGCGCGCCAAATGCGTACACGGGTCGATACGACTATGTCATGAAAGATCTGATGTCGATTAATGGTGGGACACTCGatgacgacgatgatgatggtgaCAGTCCTTCGGCCAAGCGTTTGCGTTTGGATCCAGGTGTATCCGGTGCTGCATCAACATCGTCCTATGGTGGTAATAATGCTAATCTGCATAGCAGTCAGAAGGAGTGTCCAGTTTGCTACGCCGTTTTTAACAACAATATCGGCCTATCGAATCACATGCGCTCTCACACTGCAAGTGTGCTGGCAGCTGCCAATCGCGTAACACCAAAATCGCTTACAATCACCGCTACACCAACGCTGTCTGCTGCATCGACTTTACAGACCGCTGGCGATGGTTCAGTTGCAGTAGGAGGAGGAGGTGCTAGTGGCTCCCGTGTCAGATCGACATCGCCAGCTATTACGCCTCAGCAGCAGGCGCTATACCGACGCGGTTTTGAGCAGGCTACCGATCGAAGATTCCGTCGCATGCGCTGCCAGATTTGTCAGCGTCGTTTCTCGTCCAAAAAGTCCTATCGCTATCACATGCTCAACGACCATCAGATACGCAATGTGCAATTCATTAAATGCAAACTTTGCAATGCTGATTTCGCACACGAAAAGGGTTTGAAGGTGCACTTGTTCAAAGTGCACAATACACTAATTAAAGACGAGATGATCATAAAGCAATTTGAATGCGACATATGTTCAATTGTCTATACATTAGAGATGGAACTGCTGCAGCACAAAAAAAGCGTGCATGGCTCTGAGGACGCGCAGGCCGAAGACGTTGATATGAATGAGACGGCAGCGTCAGCAGCTGGTTCAATGCTGGATGCCTCGACCTTGAGCGCTGCAAATCAATCGGGCATTTCAACACCGATTAGTGGAATATCCAACAACATCGCCGATAGGCCGCTGTACTGGTATCAGTGCAAATACTGTCCATCAAACTTCAACACTAACAAGAAACTGGCCATACATATAAACTCACACGATGAGTTCGATTCGAAGGATTACTCGTGCAAAGATTGTGGCAATGTGTATAGTGGGCGCAAGAGTCTTTGGGTGCATCGCTATAAAAAACATCCACAGATTGCTGCGCCTGCGGAATGCGTTCTCTGCCGAAAGGTCTTCTTCGATCGGCAAATGTTGGAAAATCACACGCCCACTTGCAATCGTAAACCGATAACATCAACGGGTGCACAAGCGGAAAACGTGAACGCCGCTGGCAGCACTACAATCCGGCCAATATATAAGCACAAAActggcgatgatgatgatgacgaggaTAACGGTGCTGCTGATGAGGGCAGCGATAGCAACACTGGCGCTGCCAACGGCAGGTTTGTGGGAACACTGGGCGGCGGAGAAGTCGAGATATCAACCATGCCCAGCACAACACCGACGACAATGAAATTCAAGATACCTGAAGTTGCCTGCACAATTTGTGGTGCACGTTTCAGTGATCAAGAACTCTTTACCAAACACATACAACGTCACGAGCAAGAACTGTATACGGATAATCCGCTTGCCGCTATGTTCGATGACGGACCGAGCGATCCGAATCAGTTCTATTTGGATCTTGTTAATGAGAATGGCGAGTACGCTTGCGATCTCTGCGTAAAGACATTTACCCAGATGACTGCATTCAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAACAAACAGaACCAACAAGACGGCGATCTGGCAGCCAGTGCAgcgagcaacaacaacaacaacaacaacaagcagcaccccaacaacagcagcagcagcagcagcagtaccagccacaacagcaacagcagcaacaacaacaacaacaacacgtcGTTGACGAACATCCAACCACATCTGCAGGAGCTTCATGCTGTGGGTTTAATGCCGAATCATCAAATTCAGCATTCCAAATCCCTGAAACGCAAGAGGGAACTGAAGTGCCAATATTGCCCCTCGACcttcatcaacaacaacaatctgcGACGTCACATGTACGAGCTACACAAGAACGAGGTGAGCATTCTGCCGGAGCCACCGAAAATTGAGATTGATGATCCGCTGTCATGTCGCCGCTGTTCCTTGAAGTTCAAGACGCGTGAGGAATGGATCGAGCATAAGGTGAATGATGCGCGTACAGTGCGTCCGTTTGGACCATTCCAGTGGGGCTGTGATTTGTGCGGTGACTATGTATCGCGCAAGGAGAAACTAATCAATCACATAACTAATCATCATCTTAAGGAGTCAACCACAGCACCGGTTCAAGAGTTAAAAAGAGAGAACAACGTTGAGCTGAAGAGCAGCACGAATATCACAATAAAGGTAGAAAAGGACTCAAACAGTCACCGGGCGGACAATGATGATGCCGTCGAGGAAGACTATGTCGAGGAGGAAGAGGAGGAGGAGGATGAGTTTGATAACAATGAAGATCATGTCGATAATGAAGAAGTCGTCATTAACGACGATGAGGATGACGATGGAGTTGATGAAGCTGACGATCGTCTGGTAGAAGTTGTTGATGACGACCTTATCATACAAGAAGATGCTGACGCTGATGCGCAACCAGCCGACGATGAGGCACATTTTGGTGATGCAGATGTTGATGTTGCGGTTAATGTTGAAGTAAAAGATGCTAATGATACCGATGTTGAAAACAGCGGTAATGAGgaggacgacgatgatgatgatgtcgtcgatgacgatgatgacgacgacgataaccaagatgatgacgacgacgacgatgatgatgatgatgacgacgacgatgaggaAGATGATGATATTGAGTCGGATGCCGAAAGTGAAACTGGgcaaaaaatagcaaattatATTGAAGCAACTACCGTTTTGACAGACGCTAGCGCCGCTGCACCAGTAAAGGTGACAATCAAAAAGTCACCATCGTCGTCGTCAGATGAATTAACTATTGTCAAGCAAGAGTACGACATAAAGCCAGACGAATTTCTGGACGAGGTgtcaacaactacagcaacaactgACATCAAGGAAGAGCTGGTGACAATCAACGGTAGAAGCAATAGCACCAACAACAAGGGAAACAACGAGGCCAACGTCGTCATATCAACTACAAACATCAACAGTAACAACACAAACACCGACAGTTCCAGTGATAgcagtgatgatgatgatgatgattccgGAAGCACTGATTCATCATCAAGTTCATCGAATTCAACTTCGACAAATTCCACGGGTGAGGCGCGTAAAGCTGCAGCAaatattgctgctgctactaatGTTAAGGTTAAGTCTCCTTTTGCTTGTGATCTATGTCAACTTTATTTCGATTCGCAGCCCGAACTTCAGAAGCATGTTAAGATGCATTTCCTCAATGGGCCTGGCTCTGTAAACGTAAGCAAATCAACTTCTATCACAAGTGCAGCCAATACGATAACGACCAGTGTAACTACGAAGGCGGCGTTGATGCAAAAGCATCACGTCGTCAtcaataatagtaatagtaatagtagtaCCACTGGTGGTGGTCGTAATGGTGGTGCTAGTGGTAGTGCtgtaagcagcagcagtaacactGTATCGTAA
Protein Sequence
MSEENLLRARQNCCRLCLAPQTECISIVNSYAADREPLATKIQNCVNIKITTNDRLSMYICHACISYLNSWQSFKNRCLSSQSKQRNWLDANKQQQLLDNNVSISEVNNVATGGNNNNSSGKGENGEQQQDDQQQQEPTDKTSNILEGITSLKKRKSLTVYPLPAVPIKDEPVDSDEDYHMRHQDESDEMVDPTLFLERTEHEGDAPIMDDSYDYGAQRNTAAAVAAASLPPATVANVAAAGDLKVAQCRACNLQFSTRANARRHERNLHPNLFELSTASPNNTPVTKPTPALAAALELQRAAAAAATIEASKAVASGSISAQKYRQEVMNAFNKCEGGGYDYENPEKYQHLLNDDKIAFIQQNCEFLDQYQNMTCRCCNKAFSTYKNFMAHIRKKYKTLPRNLCFNCLKQNESKSLFISHLKKRSCINLYRLLNSLATKNPSFSSGVIAAPRSKSASVASTKSATPEGMRAKELLINKMYECKICPQQFRTKHEFRTHVYDCHADVPRKDNASIQCSFCGLEIIDPVDRKRHYNNMDCIVSLRCVTCKGKFDNHQRFLDHVYQEHLGNVSDNSSTLSGAVARHKSTEISPGKQNVSTTGGGASSNDESHSSGVALTSTPAAAAGGAASQAPAAKSQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDKLPETYKCVSCGAGFPRISNLREHMLNVHGSDRNRVSGGFEYIVNADALKLLDTGAPNAYTGRYDYVMKDLMSINGGTLDDDDDDGDSPSAKRLRLDPGVSGAASTSSYGGNNANLHSSQKECPVCYAVFNNNIGLSNHMRSHTASVLAAANRVTPKSLTITATPTLSAASTLQTAGDGSVAVGGGGASGSRVRSTSPAITPQQQALYRRGFEQATDRRFRRMRCQICQRRFSSKKSYRYHMLNDHQIRNVQFIKCKLCNADFAHEKGLKVHLFKVHNTLIKDEMIIKQFECDICSIVYTLEMELLQHKKSVHGSEDAQAEDVDMNETAASAAGSMLDASTLSAANQSGISTPISGISNNIADRPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSKDYSCKDCGNVYSGRKSLWVHRYKKHPQIAAPAECVLCRKVFFDRQMLENHTPTCNRKPITSTGAQAENVNAAGSTTIRPIYKHKTGDDDDDEDNGAADEGSDSNTGAANGRFVGTLGGGEVEISTMPSTTPTTMKFKIPEVACTICGARFSDQELFTKHIQRHEQELYTDNPLAAMFDDGPSDPNQFYLDLVNENGEYACDLCVKTFTQMTAFKVHRKWHFRGDNKQNQQDGDLAASAASNNNNNNNKQHPNNSSSSSSSTSHNSNSSNNNNNNTSLTNIQPHLQELHAVGLMPNHQIQHSKSLKRKRELKCQYCPSTFINNNNLRRHMYELHKNEVSILPEPPKIEIDDPLSCRRCSLKFKTREEWIEHKVNDARTVRPFGPFQWGCDLCGDYVSRKEKLINHITNHHLKESTTAPVQELKRENNVELKSSTNITIKVEKDSNSHRADNDDAVEEDYVEEEEEEEDEFDNNEDHVDNEEVVINDDEDDDGVDEADDRLVEVVDDDLIIQEDADADAQPADDEAHFGDADVDVAVNVEVKDANDTDVENSGNEEDDDDDDVVDDDDDDDDNQDDDDDDDDDDDDDDDEEDDDIESDAESETGQKIANYIEATTVLTDASAAAPVKVTIKKSPSSSSDELTIVKQEYDIKPDEFLDEVSTTTATTDIKEELVTINGRSNSTNNKGNNEANVVISTTNINSNNTNTDSSSDSSDDDDDDSGSTDSSSSSSNSTSTNSTGEARKAAANIAAATNVKVKSPFACDLCQLYFDSQPELQKHVKMHFLNGPGSVNVSKSTSITSAANTITTSVTTKAALMQKHHVVINNSNSNSSTTGGGRNGGASGSAVSSSSNTVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00890324;
90% Identity
-
80% Identity
-