Basic Information

Gene Symbol
-
Assembly
GCA_035044765.1
Location
JAWNNQ010000162.1:83722-85141[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.33 2.9e+02 2.0 0.0 4 18 74 88 71 89 0.92
2 6 2.8 2.4e+03 -1.0 0.0 12 44 120 158 118 160 0.70
3 6 3.2e-07 0.00028 21.2 0.4 1 30 166 196 166 200 0.93
4 6 1.1 9.8e+02 0.3 0.0 22 42 207 227 204 231 0.77
5 6 1.4e-10 1.2e-07 31.9 0.0 2 44 238 281 237 283 0.90
6 6 2e-12 1.7e-09 37.9 0.2 3 44 291 333 290 335 0.95

Sequence Information

Coding Sequence
ATGAACTCACTTGTTGAAAgtattaatacaaaatacaagcGCCTTTTGTTAAAATACACGAACAGACCGCGCGGTAAACTTGTTACTGTTGCAAATAACGGAAATTCATACTTTCGTGATGCGCTCTATCGATGCTGCCCAAATACGCCAGACTATATAGAACGCAAGGCTATGGGTGAAATGTTTCCTATGGATTACAACTACCACGCCCGTCACATTTGGACGCAGAGCGACAAGTCATGCCTTATAAAGGGCGTAAAGGAAGAGCTAACCGAACACTTGGCAAGAATTGAGACACCCAAGTCGAAGGAAATCGCTCGTCGGCTAGCCGACTGCAAATCCATGAAACTAGCGGAATTATTAGCATTGATCGAGGACATTGGCGACAATTTCAAAATAGACTGGTATCATATGTCCTCAAACTTTTTGGGTCATCGCCACCCAGCCACTAGCTGTGAGGCAATGTGGCGAATGTTTCTGCATCCGAATTTAAAACGTACTGACTGGGAACCGGAAGAGGATAAACGCTTGATTGAGAtagccaaacaaaataaatatcaaaattgggaACTTATAGCTGAACAACTGGTCTCTAACAACGCTCCTGGCGGTTTAATAAACTGGGGCAAAGTATCGGCAAACTTTCCAGGTCTATCATGGTCCCGTTTGTATTATCGCTATTATGCTTTGAAGAATCGAGGCATACGTGGCAAACGCTTTAGTATTGACGAAGATTTGCGCTTGATTAATGCCGTCAAAAAGCATGGAaacaaatttatcttttttgcGCGCACACTTTTTCCTAATCGCACTTCCGCGCAATTAAGAAATCATTATCACAATTCGTTGAAGCCGCGCACAATTATTACCACCTGGACTGTTGAGGATGACAAGAagcttgttgcttttgttgagGAACATGGCAAATCATCGTGGCGTCAGTGTGCCGAACTATTGGGTAATCACACGCGCATGAGCTGTCGCACACGGTATATCACTATTGAGCGTTTTCTGGCAGATAACCCTGATGCGCAAGCCGAGAATTATCCGCGTAAAAGACAGCTACGCTCACAGAAGTTTATTGATGAAATCAAGCGTGCCGAAAATCCTGTTGAACTGAGCAGCAGCGATGATAAAACACTAACATTGAAGGAAATACAATTGCAGCATAaaccataa
Protein Sequence
MNSLVESINTKYKRLLLKYTNRPRGKLVTVANNGNSYFRDALYRCCPNTPDYIERKAMGEMFPMDYNYHARHIWTQSDKSCLIKGVKEELTEHLARIETPKSKEIARRLADCKSMKLAELLALIEDIGDNFKIDWYHMSSNFLGHRHPATSCEAMWRMFLHPNLKRTDWEPEEDKRLIEIAKQNKYQNWELIAEQLVSNNAPGGLINWGKVSANFPGLSWSRLYYRYYALKNRGIRGKRFSIDEDLRLINAVKKHGNKFIFFARTLFPNRTSAQLRNHYHNSLKPRTIITTWTVEDDKKLVAFVEEHGKSSWRQCAELLGNHTRMSCRTRYITIERFLADNPDAQAENYPRKRQLRSQKFIDEIKRAENPVELSSSDDKTLTLKEIQLQHKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00890902;
90% Identity
-
80% Identity
-