Basic Information

Gene Symbol
Xbp1_1
Assembly
GCA_035044765.1
Location
JAWNNQ010002073.1:583602-584583[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.1e-14 7.8e-11 42.1 6.1 2 42 75 115 75 117 0.94
2 3 6.4e-06 0.0083 16.4 4.3 25 64 112 151 110 157 0.95
3 3 1.3 1.7e+03 -0.6 0.2 36 49 198 211 192 214 0.70

Sequence Information

Coding Sequence
atgtcAAACGCAGTTTTTATAACAGTGCCCAAATACGTGGCCATCAATACAACAAGCACCGCCGCGGTGTTACCCAAGTTACGCCCAGCACCGGCAGCTTCGCCGGAGCTTAGCTCGGGCTATGCGTCATCCGGCGCCGAGGAGTGCGGCTCCAGCGTGTCAACAGTGGGCAATAATAATGCGCCGAAGGCTAAGAAGCGACGCTTGGATCACTTGACATGGGAGGAGAAAGTGCAGCGCaaAAAACTAAAGAATCGCGTTGCTGCACAGACCTCACGTGATCGCAAAAAGGCACGCATGGAGGAAATGGAATTCGAAATTAAGGATCTAACGGATAAAACAGAATTACttgaaaataaatgtgaaagttTGCAGGCCATAAACGATTCGCTATTGGCCAAGAATCATAAACTGGATGTGGAAGTTGAACTAATGCGTCAGCAGCTTAACGAAATGAAGGAGctacaaaagcagcaacaacaacaacacagcaCAATGTCTTGTGCCGGCTGTGCGTCCATATTAAACGGATCAGCAGTATCCAAAAATACTGGCCCTCTGCCGCAGGGTACAATAACCATGGACACACAGTCgacacaagaacaacaacaacagctgaaaaAGAGCAACACACTAGCCTCACTCTGGAGGATTGTGGCGCTCTGCCTACTCTACAAGACATGCTACtcgacgtcgtcgtcgacgATGAAGACCATGACGAAGAATTCGATGCGCGAAGACTTGAAGAGCTGGCCGAAAGTTTGCTCGCAGATATCACCGCAGACATGGAAACAGGCACTGGAACGTGCCATGAAATTGTTGCCCAAATTGCGGGCAACACAGAGCGATTGTCTGGATCAGTGGTGGGGTCCACAGCAGAGTGCTTGGAATCCGGCGGAAATAGAAATAATGgcttga
Protein Sequence
MSNAVFITVPKYVAINTTSTAAVLPKLRPAPAASPELSSGYASSGAEECGSSVSTVGNNNAPKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEFEIKDLTDKTELLENKCESLQAINDSLLAKNHKLDVEVELMRQQLNEMKELQKQQQQQHSTMSCAGCASILNGSAVSKNTGPLPQGTITMDTQSTQEQQQQLKKSNTLASLWRIVALCLLYKTCYSTSSSTMKTMTKNSMREDLKSWPKVCSQISPQTWKQALERAMKLLPKLRATQSDCLDQWWGPQQSAWNPAEIEIMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00889873;
90% Identity
-
80% Identity
-