Basic Information

Insect: Leucophenga maculata
Gene Symbol: -
Assembly: GCA_035044805.1
Location: JAWNNP010002099.1:59768-62030[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.6 3.5e+02 2.3 0.2 2 23 37 59 36 59 0.92

2 8 0.014 0.9 10.4 0.5 1 23 457 479 457 479 0.99

3 8 0.011 0.65 10.9 0.6 1 23 486 508 486 508 0.95

4 8 0.00073 0.045 14.5 0.5 2 23 523 544 522 544 0.97

5 8 3.6e-06 0.00022 21.8 1.1 1 23 593 615 593 615 0.96

6 8 0.009 0.55 11.1 0.4 1 23 623 647 623 647 0.97

7 8 1.8e-06 0.00011 22.7 3.8 1 23 653 675 653 675 0.98

8 8 9.9e-05 0.0061 17.3 0.0 1 23 681 703 681 703 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.6	3.5e+02	2.3	0.2	2	23	37	59	36	59	0.92
2	8	0.014	0.9	10.4	0.5	1	23	457	479	457	479	0.99
3	8	0.011	0.65	10.9	0.6	1	23	486	508	486	508	0.95
4	8	0.00073	0.045	14.5	0.5	2	23	523	544	522	544	0.97
5	8	3.6e-06	0.00022	21.8	1.1	1	23	593	615	593	615	0.96
6	8	0.009	0.55	11.1	0.4	1	23	623	647	623	647	0.97
7	8	1.8e-06	0.00011	22.7	3.8	1	23	653	675	653	675	0.98
8	8	9.9e-05	0.0061	17.3	0.0	1	23	681	703	681	703	0.98

Sequence Information

Coding Sequence: ATGAGTGTGCTCGCCTATCCGCAAACAAGCGAAGATGAAATTTTTCGAAGCTGCACCAAGGACTGTGGCATTGTCTTAGCTACGGAAGACTTTCAATCCTTTACGCTGAGTTGTAAGTTTTGTGCGGAGCAGTTTTTATATTTCGATGCGTTCATTGGCCACATGCAAACAGAGCATCTGGACTCTGTGCACCGAGTTGAACATGATGGCGAAGTAGGCGGCGTCATACAGGAATCAACAAAAGACGCATCTATAAATGGCAAACGCCGACGCAGTGAACTCGATGATAGTCTCAATGGCTGCAGCGTTAACGTTGGCCACGACGATGACGACCTATTGAGCGATGCTGATCCATCAACTTTGCTAGAACCACAAATGGTCATTAAACAAGAGCTAAGCGACAACAATGAGGATGATGATCTTGAGGACCATGAGAATCTTATGATTGATGAGGCCGATGCGGCCAATTTGAAGCAAGATGATTCGTTTACCACTGAAGTCAATGTGCCAATGGATATGGATGAGAATAGTTTTTTGGATGAGAACTACGACTTAGACGAAAGCTATAATATAAATGAGCTAGGCAACGAAGATGACGGCAGCCGAGGACAAGATGAAATTGATACAACACCAGTCAGCTATGATGAAATGGTGGAGGAGTCACTACTAGGTCATGAGTCCGAATTAACAATGCATATCAAAGATCGCAAAATGATACAGTTCCTTATTGATTCCTATAAGCGTAATCCATTTCTTTGGGATCATCGACATCCACAGTTTCGCGATCGCATCAAGCGTCAACGTTTTCTTGAATGGATTGTACAGGAGTTTAAGCGTCGCTTTAATATTGCTCTTGCCAAGGATGCCATAACGCGCAAATGGGACAATCTACGCACCGTCTATAAGCGCGAATGTAATCGTATGTCGCTCGAACGCACCAATATAAGTACGTTGTGGTATTTCCGGCAGTTGCATTTTCTCAATAATCTCTATAGCTATAACAACCAAATGACCGAATCAGTTGTGCGGGAGACTTCGTATCGACGTCGTTTCTCTGCTATTTGGAGCGATGTGTCTACTTCAAAATTGCTGACGCTTGTAAAAACACATCAATGCTTCTATAATCGTATTGATCCGGATTATCGCAGCAAAGAAAAACGCGGGGAGGCACTACAGTTAATGTCAATCGAATTACAACCCATTATCGAGGTCTCGACTATACAAATCTCGAAGCGCCTGTCGCAGTTGCGTTTCGATTACTCTAAACAAAAGTTTGATCGTCTGAACTCTGAACGGCTCGGCAAAAAATTTATACCCACTTACACATATTACGAAGCAATGCATTTCATGGACGATGATGTGCCGCCATTCAAATGCCATCAATGCGACGCTATTGTGCAGTCGGCCCGTGAAATGGATGTACATATGCAAACGCATGATAACGGATTGGACTGCTTTCATTGTAGTGTCTGTGATGTACGCTTTGCAACGACTGAAGAGTTTAGTGCGCACAATCTAATACATCTGCCCGGCGTACCGGGAAACACTAGTACAGACTCCAAGCTCAGTTGCGACCTTTGTACAGCAATCTTTCGCGAGAAGAGCAACTACGATGAACATATGCGTCGTCACAATGACGAGTTACTGTTGCCTACTCTAGGCTTGGATCCAACTTTACCCATAATGGATATGAGTGGCAGAAGCGCATTAGCTGCAGTGCCGTCAGATGCTAATGCAGCATTATTGGCACTGCAAGGCCTTGAACCACCGAAACCCTACCCCTGTGACATATGTCATCGTACATTTGCCAGTCAGGGGCATTTAAATGCTCATCGCGTCGTACACACCGATGAACGTGATCGACGCTACAGATGTGATTATCCACAGTGCGGGAAGTCGTTTTTGGTGCGTCAAAGTTTGCTCGAACACGTGAAAATGCACTATACCGACGATGAATACAAGTGCGATATATGCCATAAAGGCTTTAAGTCATCGAAGAACCTGCAGAACCATAAGCAGATACACGATAAGGTAAAACGCTACGTCTGCCCAATCTGCGGGTCAGCATTTGCACAAGCCGCTGGTTTATATCTCCATAAGAGGCGTCATAATCGACCAACATTGACCGGACGAACTAGCCTTTGA
Protein Sequence: MSVLAYPQTSEDEIFRSCTKDCGIVLATEDFQSFTLSCKFCAEQFLYFDAFIGHMQTEHLDSVHRVEHDGEVGGVIQESTKDASINGKRRRSELDDSLNGCSVNVGHDDDDLLSDADPSTLLEPQMVIKQELSDNNEDDDLEDHENLMIDEADAANLKQDDSFTTEVNVPMDMDENSFLDENYDLDESYNINELGNEDDGSRGQDEIDTTPVSYDEMVEESLLGHESELTMHIKDRKMIQFLIDSYKRNPFLWDHRHPQFRDRIKRQRFLEWIVQEFKRRFNIALAKDAITRKWDNLRTVYKRECNRMSLERTNISTLWYFRQLHFLNNLYSYNNQMTESVVRETSYRRRFSAIWSDVSTSKLLTLVKTHQCFYNRIDPDYRSKEKRGEALQLMSIELQPIIEVSTIQISKRLSQLRFDYSKQKFDRLNSERLGKKFIPTYTYYEAMHFMDDDVPPFKCHQCDAIVQSAREMDVHMQTHDNGLDCFHCSVCDVRFATTEEFSAHNLIHLPGVPGNTSTDSKLSCDLCTAIFREKSNYDEHMRRHNDELLLPTLGLDPTLPIMDMSGRSALAAVPSDANAALLALQGLEPPKPYPCDICHRTFASQGHLNAHRVVHTDERDRRYRCDYPQCGKSFLVRQSLLEHVKMHYTDDEYKCDICHKGFKSSKNLQNHKQIHDKVKRYVCPICGSAFAQAAGLYLHKRRHNRPTLTGRTSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00891321;
90% Identity: iTF_00891321;
80% Identity: -