Basic Information

Insect: Leucophenga maculata
Gene Symbol: -
Assembly: GCA_035044805.1
Location: JAWNNP010000446.1:1963725-1965889[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.3 80 4.3 2.3 2 23 293 316 292 316 0.93

2 10 0.34 21 6.1 0.1 6 23 326 343 326 343 0.98

3 10 0.0005 0.031 15.1 2.0 1 23 349 371 349 371 0.99

4 10 0.0047 0.29 12.0 3.7 1 23 380 402 380 402 0.99

5 10 0.0013 0.083 13.7 0.6 2 23 411 433 410 433 0.93

6 10 0.0028 0.18 12.7 0.1 2 23 440 461 439 461 0.95

7 10 0.00011 0.0066 17.2 0.2 2 23 470 492 469 492 0.96

8 10 0.44 27 5.8 0.7 2 23 501 523 500 523 0.95

9 10 2.1e-07 1.3e-05 25.7 1.6 1 23 528 550 528 550 0.98

10 10 6.8e-06 0.00042 20.9 4.1 1 23 556 579 556 579 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.3	80	4.3	2.3	2	23	293	316	292	316	0.93
2	10	0.34	21	6.1	0.1	6	23	326	343	326	343	0.98
3	10	0.0005	0.031	15.1	2.0	1	23	349	371	349	371	0.99
4	10	0.0047	0.29	12.0	3.7	1	23	380	402	380	402	0.99
5	10	0.0013	0.083	13.7	0.6	2	23	411	433	410	433	0.93
6	10	0.0028	0.18	12.7	0.1	2	23	440	461	439	461	0.95
7	10	0.00011	0.0066	17.2	0.2	2	23	470	492	469	492	0.96
8	10	0.44	27	5.8	0.7	2	23	501	523	500	523	0.95
9	10	2.1e-07	1.3e-05	25.7	1.6	1	23	528	550	528	550	0.98
10	10	6.8e-06	0.00042	20.9	4.1	1	23	556	579	556	579	0.98

Sequence Information

Coding Sequence: atgtttgatttttgtcCAACGAACTTTACTTCTGCATCACGGTGCGGCATACAGTATTTAGTGTTGCTAGGCGTCGCAAACAgtTGCATAAATATGTTGTGTTATCTTTGTCTGACTGCAAGTTGCAATGATCGCAGTGACATAGAATTTGCGTCCGACGAAGCAGAGCTGCTGGATGTGAAGCATATTATAGAGAAACATTTTTGGTTGCTGGTCAGTAATGCGCCGGAAACGGCGCGCTTAATATGTACAACATGCTGGAAGAACCTGCACACATTCCATCAATTTTACTTGAGGGTAGAACTAGCACACAATGCTCAACTGGAGGAAGCAAAGTCGGTGATTGTGAAAGTCAACGAGTTGGAAGATGCTGCAGTCAATTTTGAGACGCCAGCGCCTATAAAAGAGGAGCACGATGCTATTGTTGCTCCAACGCCAACGCCGCCGGTGAAACGCAAACGGGGACGTCCTAGAAAGTCTCTTTTGACTGATTTAACACTTGGCGATGAATCAGAACCAGCAAATGCCTTAATGGAGGTGGTACTAGaggaaattaatttgaatgaaattaaaattgaagtacCCGAGGCTGATCTAACAATGGCGGATGTGCTGGACGATAGTTTACAAGGCGACGATTACGATGACGGTGGAGCGCCGTGCTCAGACTGTTCCAGCGATAGCGATGATACTAATGATACCGATACAGATTTTAAGCCACTTGCAGAATTAGTTAAGACGGAGCGCATGAAACGTACACGTGTGGTGcgtggaaaatataaaaaacgagACCCAAAACTAAAGAAACCAAAATCAGCAGAAAAGAGTAATAAAACTAAAGACTTCAATGAATACATTGCTGCACACTTTAAACTCCATTGCAACATATGCAACGAACAagatttcgaaaattttacgAAGCTTCTGAAGCACTATAGGTTGCAGCACAATGTGAAACGTGGTTACGCGGTATGCTGCGGCGTTAAGTTTTATAAGCGTGGCTATCTGGTAGATCATTTGAATTACCATAAAAATCCAGAGATTTTTAAATGTCATATATGCGAACAGGTAATGAGCAAAAGACGTAGTCTGCAAATACACCTGCGCGTACACGATTTAAAAACCAAAGGTCGTGTTTACAAATGTGATATATGCTCAAAGAGTTACTATAGTCATGTCATATTTACTCGACATCAGCTCACACATGTGCCAGAGGGCGATCGTATCATTCCGTGTACGCAATGTGACAAACGATTCCCCACTACATATACAATGCAGCAGCATTTCGAGCGTGTGCATCtcaacaaatatgcaaaaatgtgtGACATTTGTGGCAAGTCCATACAAGGACGTGAGGCACTGGCACGCCACATGGAAGAACATGCAAATGGCGGCCGCCAGTTGATACAATGTGATATCTGTGGCGTTTCGTTGACTACGAAATACGGGCTTGCACGGCACAAGAAAATGATGCACACCGAAGAGAGTCGTCGCCCGGTGCAGTGTACCATCTGTATGAAGATATCACCCAATGCACATGCTAATAAAACGCATATGCAATATATGCACTCTGGGCGCGTACACCAATGTCCCATGTGCGAGAAAACTTTTAAACGAGCACCAAATTTACGAGAACACATGACAACGCACACTGGCGATGTGCTCTACACCTGTCCACATTGTCCAAAAACGTTCAATTCAAGCGCTAACATGCATGCGCATCGGAAAAAAATGCATCGAAAAGAATTTGAAGAAGCGCGACAACAAAGATTTCAGGCGCCTATTGTGGGCGAGGAACGTTGTTCAATTAAAGAGCTCAGTGAACGGAAAACAGCTGCTAAGGTACAGTCTTCTCATACCATTGAGTCGATGGAAGGACACGATGTGGTAGCCATTAATGAATAA
Protein Sequence: MFDFCPTNFTSASRCGIQYLVLLGVANSCINMLCYLCLTASCNDRSDIEFASDEAELLDVKHIIEKHFWLLVSNAPETARLICTTCWKNLHTFHQFYLRVELAHNAQLEEAKSVIVKVNELEDAAVNFETPAPIKEEHDAIVAPTPTPPVKRKRGRPRKSLLTDLTLGDESEPANALMEVVLEEINLNEIKIEVPEADLTMADVLDDSLQGDDYDDGGAPCSDCSSDSDDTNDTDTDFKPLAELVKTERMKRTRVVRGKYKKRDPKLKKPKSAEKSNKTKDFNEYIAAHFKLHCNICNEQDFENFTKLLKHYRLQHNVKRGYAVCCGVKFYKRGYLVDHLNYHKNPEIFKCHICEQVMSKRRSLQIHLRVHDLKTKGRVYKCDICSKSYYSHVIFTRHQLTHVPEGDRIIPCTQCDKRFPTTYTMQQHFERVHLNKYAKMCDICGKSIQGREALARHMEEHANGGRQLIQCDICGVSLTTKYGLARHKKMMHTEESRRPVQCTICMKISPNAHANKTHMQYMHSGRVHQCPMCEKTFKRAPNLREHMTTHTGDVLYTCPHCPKTFNSSANMHAHRKKMHRKEFEEARQQRFQAPIVGEERCSIKELSERKTAAKVQSSHTIESMEGHDVVAINE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00891265;
90% Identity: -
80% Identity: -