Basic Information

Insect: Leucophenga maculata
Gene Symbol: -
Assembly: GCA_035044805.1
Location: JAWNNP010001279.1:304139-321863[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.8 1.7e+02 3.3 2.5 1 23 58 81 58 81 0.95

2 8 0.032 2 9.4 0.5 1 23 712 734 712 734 0.96

3 8 2.3e-05 0.0014 19.2 1.1 1 23 740 762 740 762 0.98

4 8 5.5e-06 0.00034 21.2 0.3 1 23 768 790 768 790 0.98

5 8 2.6e-06 0.00016 22.2 1.3 1 23 796 818 796 818 0.98

6 8 0.00069 0.043 14.6 1.8 1 23 824 846 824 846 0.97

7 8 9.1e-05 0.0056 17.4 1.0 3 23 854 874 852 874 0.93

8 8 0.0014 0.086 13.7 0.5 1 23 880 905 880 905 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.8	1.7e+02	3.3	2.5	1	23	58	81	58	81	0.95
2	8	0.032	2	9.4	0.5	1	23	712	734	712	734	0.96
3	8	2.3e-05	0.0014	19.2	1.1	1	23	740	762	740	762	0.98
4	8	5.5e-06	0.00034	21.2	0.3	1	23	768	790	768	790	0.98
5	8	2.6e-06	0.00016	22.2	1.3	1	23	796	818	796	818	0.98
6	8	0.00069	0.043	14.6	1.8	1	23	824	846	824	846	0.97
7	8	9.1e-05	0.0056	17.4	1.0	3	23	854	874	852	874	0.93
8	8	0.0014	0.086	13.7	0.5	1	23	880	905	880	905	0.96

Sequence Information

Coding Sequence: ATGACGAATGTCATGTCAATTAATGGTTTTGGTACCACCTTAGAAACATTATCTACATCTAGTAATTTCAATTCAACAATAGAAGAACTTTATCCGCCTCAATTGGCAGACCATactttttttcgaaaatgtgGCGAAATTACTGTCTCACCCGATGAACAATGCTTCGGTTTCAATTGCAATTTCTGTCCAGAGATTTGCCTTCAGTTTGATATGTTTGAGCAACACATTCGTTATAAACATGGGCTGGATATCCAGAAGTGCTTGAATGTGGTGTCGATGGGCGAAGGGGTGGCGGAGGAAGAGACAATGGGTCGATTGACACCAACCGAtttaatgatgatgataatggaAATGGAGGACACAACCACGGGCAACAACGCAAACGCggccacaacaacagcaaaaatactCGATGagaaacgcataaaaaaatacaattggaATGAGAAAACTTTAgatacaacagcaaaaacatcGACAGCCGTTGAATTTGAAAACACGCAAAGcctgacaacaacaaaaacaacatgtAACTCAAATTTCGGTCTGCTCGACATGTCATACAATAATATAGCATTGGTGGACATGAATAATGTGGGTCTAGAAGTTGCCTTAGGCACACCCACCGAGAACGTTGATACCACCCACGCAACCATGCCAATGCCTGAAGCCGTTGCAGCCGATATGGGCGAAATTGGCTTGGTATACATTATGGAGAATCCACTTTCCTCCAATTTATTCTGCTGCACTTCTGACCATTCGCTAGAGGTGGGCAACGCTTTGAATGATACAATTGATCCATTTGCAATGTTAACGGACTtcgatgaagaagaagaaaaagcagtGATGCAGAACGCAAACGATTTGGTTAAGGTGCGCGAGGAGGAAGTTAATACCGAAGAAGACAATGAATTCGCAGAAATGGAAGATGAGAGCGAGTCGCAAGGGAGCACAGTGACACAAGAAGAAGCAACTCTATCGCCGTCCCCAGCTGCACAATCCATTGCCACTAAGCCTCTCACGCGACGCGAACTGGAACGCAACAAAGATATCGTTGGTTATCTGTTAGGCGCCTATGAACGACTCGAGAAGCTCTGGAATCCAAAACATCCAGAATACAAATACAATGCAAAGCGCAGTGTTTATAGTGAACTAGCAGAACCGTTGGAACGTGATCTTCAGCTAAACTTCAGTCTGAGCGGTGCAGAGATCTTTGCCCTTCTCAAAGAATTGCGCGGCCGCTATAGACGCGAGCTGACCAAGCTAAATGCTTTAGGCGATAAATATAAATCAAGGTTATGGTATTTTGAACGTATGCATTTTCTACGTGGCGTCATAGAAGGTAAACGTGCAGAGCGTGAGGCGAAAAGCATCAGCGGTGATAGTACAGAAAGTGAAAAATCGTTCGAAACGGATTCGGAACCAGCATGGAAGAGTACACAGCAACGAGAAGCATTGAGTTACATTTTGAATGCTTTCAAGCGACAGGAGTGCCTGTGGAATCCCCAGCATTTTGATTATGTAAACTGcaataagaaagaaatttatCGGGAAATTGCAACTCAACTGCATGAGGATCTACAGTACACCATGAGCGGCGAGGACTGCTTCAGCGAAATTCAGAAATTACGTACGCGCTATCGCAAAGAGCTGCGGCAAATGATCAAGCACAAAGGACTGTATATACCAAAGTTGTGGTGCTTTGATGAACTAgagtttttgcaaaaaattttgcaagaGCAGATCTATACACGGATCAGTAAGAAAAAAGGAGTCGTAGAGACCGTGCCTAAAACAAAGTTTATAACTGCTGATTGCATTTCTTTCAAAGACGCAGCTGCACAATTACAATTTGTTGAAATCTACAGAAATTATCCAGCACTCTGGGACGTCGATCATCCGGACTTTCGTTCTACTGCTTATAGAAACATAGCACTTGGACAAATGCTTGACGAGGTGAATGCAACTTTTGGTACAGAGAATACTAGCGCACAATTAGAGAAAACAATCTTCAAACTGCGCAAAGACTTCAGcacagaaaaacataaaatactaaCCAGCACGAATAGCGTCAGCACCACGCTTTTGCACGAAAAACTTGCCGATTTTTTGGAGCAAAATTTGGGTCCCTTTCGTTGTGAAATCTGTCAGGAGCTCATAAAGACATCGGATCAGTATAAAGTACATCGCTCCGCTCATGATAATACACAGCCATTTATTTGCACATTATGTGGCAAAGGTTTTCAGATGCCTTGTAATCTCACAGTGCACATAAGGCGCCATCGACGCGATTATCCTTATGCATGCGAAAAATGTGATAAACGCTTCGCCACCTCAACGGAAGTTGCCATCCATATGAGAAAACACACTGGCGAGCGTCCCTATATATGTGATCTCTGCGGCAAAACTTTTAAGACTTGGTCGTTCTTCGACATACACCGTCGAACGCATCTGAATCAGTCAACGTTCCACTGTCCTATCTGTGACAAGGGCTTCTATGAGAAAAATCGCTTCACCGACCACATGAATGGTCATCTCAATATTCGTAAACATCTGTGTAACGTATGCGGCAAAACATTTACCGCCTATGGCAATCTGAAAAAGCACGCCGAACTTCATCTGACCGTAAAGAAATACAAGTGCGAAGTCAACGCTTGTGGTAGGCGATTTGCACAATTTGCTAGTCTGCGTTGGCACAAAAAACGCGACCATAGCGATAATATCGAGACCTATGAGCAATAA
Protein Sequence: MTNVMSINGFGTTLETLSTSSNFNSTIEELYPPQLADHTFFRKCGEITVSPDEQCFGFNCNFCPEICLQFDMFEQHIRYKHGLDIQKCLNVVSMGEGVAEEETMGRLTPTDLMMMIMEMEDTTTGNNANAATTTAKILDEKRIKKYNWNEKTLDTTAKTSTAVEFENTQSLTTTKTTCNSNFGLLDMSYNNIALVDMNNVGLEVALGTPTENVDTTHATMPMPEAVAADMGEIGLVYIMENPLSSNLFCCTSDHSLEVGNALNDTIDPFAMLTDFDEEEEKAVMQNANDLVKVREEEVNTEEDNEFAEMEDESESQGSTVTQEEATLSPSPAAQSIATKPLTRRELERNKDIVGYLLGAYERLEKLWNPKHPEYKYNAKRSVYSELAEPLERDLQLNFSLSGAEIFALLKELRGRYRRELTKLNALGDKYKSRLWYFERMHFLRGVIEGKRAEREAKSISGDSTESEKSFETDSEPAWKSTQQREALSYILNAFKRQECLWNPQHFDYVNCNKKEIYREIATQLHEDLQYTMSGEDCFSEIQKLRTRYRKELRQMIKHKGLYIPKLWCFDELEFLQKILQEQIYTRISKKKGVVETVPKTKFITADCISFKDAAAQLQFVEIYRNYPALWDVDHPDFRSTAYRNIALGQMLDEVNATFGTENTSAQLEKTIFKLRKDFSTEKHKILTSTNSVSTTLLHEKLADFLEQNLGPFRCEICQELIKTSDQYKVHRSAHDNTQPFICTLCGKGFQMPCNLTVHIRRHRRDYPYACEKCDKRFATSTEVAIHMRKHTGERPYICDLCGKTFKTWSFFDIHRRTHLNQSTFHCPICDKGFYEKNRFTDHMNGHLNIRKHLCNVCGKTFTAYGNLKKHAELHLTVKKYKCEVNACGRRFAQFASLRWHKKRDHSDNIETYEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00891292;
90% Identity: -
80% Identity: -