Lmac015458.1
Basic Information
- Insect
- Leucophenga maculata
- Gene Symbol
- ZFY
- Assembly
- GCA_035044805.1
- Location
- JAWNNP010002956.1:2323352-2326141[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.19 12 6.9 0.4 5 23 269 287 268 287 0.94 2 13 0.00034 0.021 15.6 0.7 1 22 293 314 293 314 0.94 3 13 0.0033 0.2 12.5 2.3 2 23 321 343 320 343 0.94 4 13 0.007 0.43 11.4 0.6 2 23 350 371 349 371 0.97 5 13 0.005 0.31 11.9 1.1 1 23 379 401 379 401 0.98 6 13 3.4e-06 0.00021 21.9 0.5 2 23 412 433 411 433 0.98 7 13 0.0047 0.29 12.0 6.8 1 23 439 461 439 462 0.95 8 13 0.0013 0.082 13.7 2.6 1 23 495 517 495 517 0.98 9 13 0.00032 0.02 15.7 1.4 1 23 523 545 523 545 0.99 10 13 0.00033 0.02 15.6 0.1 1 23 551 573 551 573 0.97 11 13 1.1e-05 0.00067 20.3 1.0 3 23 608 628 606 628 0.98 12 13 0.00028 0.017 15.9 0.5 1 23 634 657 634 657 0.97 13 13 0.053 3.3 8.7 1.4 1 23 663 685 663 685 0.92
Sequence Information
- Coding Sequence
- ATGGCCTTACTCAATAGTGATTTCTCCTTTACGTGCCGTTGTTGCATACGAAGCGAGGTGGATAATACTCAAGATGTGCTAAAACTTCAATCGCTATACAATAGGCATACAGGAGCACCTGGTGTTCTAAGCATTGCAGATATATTTACCGAAATAACAAAGCGTATTGTAATTAGTCCCACAGATGGTATGTCTCAGTTAATCTGTATAAACTGCGTGAATAAAGTGCTACAAATGCAACAATTCGTGCATATGTGCCTAGAGTCAGAGAAAATCATGCAATACCAAATTAAATCCGATAAAACCTGGGCTAATAATTACGGTTGTTCTGACGCAACGATGTTGAACAATACGACAATAGTTAAAGAGGAGCTGCAGTTAGAGGATGACAATGAATGGACAAAGCAACAACTATTTATGCAAGTTCCGATGTCAACAAATGCacagaaacaaacaacaaacacTTACGTCGATATAAATGTTATGAATGAACCATTGACCGATGATGAGGTTTCTTATTTGAATCAACAAGTTAGCAGAAGAAATTCGACAGCttcaacaaatattgtatttataacTGATGAGGAGAGCGGCAATGAATACGACACAACAGAAAAAACTTCAAGCACTTGCTATCAAAAAAAAGTCAGTACTGATGATGTGTCttctacaatttttgttgtaagtgAAATTGAAACGTCTAATGTTGGTAGCAATGATGGCAGTTTTTATGGATTTGAAACAGAAGTGCATACCTCGAATTCATCCACAGAAAGTGCAGATccgaatttaaaatatttgtgcgaGTGCTTAACATCCTTTCCGACAATTTATACATTAAATAAACACTTACTAAATCATAAACACAAACGGCGTTTTGACTGTTCCAAATGTCCGAAGTATTTTTTTGACTACCAAGAACTAAGACGGCACATGGCCACATACTGTAATCTCGCAAAGAAATGTGAATTCTGCGACATGTGCTTCAATTTGGATAAAAATCTGCGTAGGCACATAATACTGGAACACTCTAGTGAAAAGCCATTAAAATGTGATATTTGTGAAATGCGTTTCTTACATAACATAGATTTGGAGATCCATTTGCAAACACACACTGAACACACAGAGAACGCATTCAAGTGTACATATTGCGAATATACTACTGACAATGGGCTGCAATTATCCAGACATTTGGAAACACATCTTGCCGTTAATATTAATGAAACCAAGATTCAATGTGAAATCTGTAGCAAGCGtttcattGGAATCTCGCAATTGCGCACCCATATGCGAACGCACAGTGGTGCAAGGGCgcacaaatgtaaatattgtgaCTACGCTGCGAACAAAGCTTATCATTTAAAAAGGCACCTAGACCGTCATCATCATGAAGCTTACAATTctacaatagaaaataatttagctGGAATAAAAGTTGAAAAGATAAATATGGACAATATGAACCCTCCTAGAGAAAAAACGCATGTGTGTAACCAGTGCGGCAAGAGgttttttgaAATCGCGCAACTACGCTTCCACATGCGAACACATACTGATGACAAGCCATACAAGTGTCAATATTGTGAGTTTGCTGCGCGGGAACGTTCCAATTTATACAGGCATCTGCAAACGCATCTTGGCGATAATATCTACACGTGTGAACTTTGCCCAAATAACTTTCGTTCGGCCTCCGAACTGGAAGAGCATTATATTGAACATAAAAATGACGATGAGGTGACCCGCAAAAACAATTTAGATGCACTACAAGCTTTCCGTTTGAATATGCCCAATATAATGCATCCTAGAGATAAGCCATTTGGTTGTAATCTGTGTGACAAGCGtttttttgaaAACGGACAATTACGCATTCATATGCGCACACATACCGGAGAAAAAccatataaatgtaaatattgtgaGTTTGCCACTGTGAAACCTTCCAGTTTATCTAGGCATCTTGCTCGCTGGCATCTTGGCAATGAAGTCTACAATTGTAAAGTTTGTCCTCTTGGGTTTCGGTTAGCCACCGACCTGCGTGAGCACTGCAAGAATCACAAAAATGACGATGAAAAGACGAGAGAAATAAATCTAGCAGCAAGAAGAGAAAAAGATGCTAAAGAAGAGCTAAAGTTGACCACAATGCAGAGGAGACATAAGCTGAGGTGGCCTCAAGTGCCCGCCGATGTGGAAGAAAATTGTGCATTACCCAcaaacgtttaa
- Protein Sequence
- MALLNSDFSFTCRCCIRSEVDNTQDVLKLQSLYNRHTGAPGVLSIADIFTEITKRIVISPTDGMSQLICINCVNKVLQMQQFVHMCLESEKIMQYQIKSDKTWANNYGCSDATMLNNTTIVKEELQLEDDNEWTKQQLFMQVPMSTNAQKQTTNTYVDINVMNEPLTDDEVSYLNQQVSRRNSTASTNIVFITDEESGNEYDTTEKTSSTCYQKKVSTDDVSSTIFVVSEIETSNVGSNDGSFYGFETEVHTSNSSTESADPNLKYLCECLTSFPTIYTLNKHLLNHKHKRRFDCSKCPKYFFDYQELRRHMATYCNLAKKCEFCDMCFNLDKNLRRHIILEHSSEKPLKCDICEMRFLHNIDLEIHLQTHTEHTENAFKCTYCEYTTDNGLQLSRHLETHLAVNINETKIQCEICSKRFIGISQLRTHMRTHSGARAHKCKYCDYAANKAYHLKRHLDRHHHEAYNSTIENNLAGIKVEKINMDNMNPPREKTHVCNQCGKRFFEIAQLRFHMRTHTDDKPYKCQYCEFAARERSNLYRHLQTHLGDNIYTCELCPNNFRSASELEEHYIEHKNDDEVTRKNNLDALQAFRLNMPNIMHPRDKPFGCNLCDKRFFENGQLRIHMRTHTGEKPYKCKYCEFATVKPSSLSRHLARWHLGNEVYNCKVCPLGFRLATDLREHCKNHKNDDEKTREINLAARREKDAKEELKLTTMQRRHKLRWPQVPADVEENCALPTNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -