Basic Information

Insect: Leucophenga maculata
Gene Symbol: -
Assembly: GCA_035044805.1
Location: JAWNNP010002066.1:75387-77757[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.023 1.4 9.8 4.5 1 23 242 265 242 265 0.95

2 12 9.5e-06 0.00059 20.5 2.4 3 23 280 301 279 301 0.96

3 12 0.0001 0.0065 17.2 0.0 1 23 307 329 307 329 0.97

4 12 0.00025 0.015 16.0 6.8 1 23 335 357 335 357 0.97

5 12 0.0032 0.2 12.5 1.7 1 23 362 384 362 384 0.97

6 12 0.013 0.83 10.5 6.4 1 23 393 416 393 417 0.97

7 12 4.7e-05 0.0029 18.3 1.0 3 23 431 452 430 452 0.96

8 12 1.3e-05 0.00082 20.0 0.2 1 23 458 480 458 480 0.98

9 12 0.00017 0.011 16.5 2.7 1 23 486 508 486 508 0.97

10 12 0.0012 0.077 13.8 0.1 1 23 513 535 513 535 0.97

11 12 5.3e-06 0.00033 21.3 2.4 1 23 541 563 541 563 0.97

12 12 0.055 3.4 8.6 3.9 1 23 569 592 569 592 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.023	1.4	9.8	4.5	1	23	242	265	242	265	0.95
2	12	9.5e-06	0.00059	20.5	2.4	3	23	280	301	279	301	0.96
3	12	0.0001	0.0065	17.2	0.0	1	23	307	329	307	329	0.97
4	12	0.00025	0.015	16.0	6.8	1	23	335	357	335	357	0.97
5	12	0.0032	0.2	12.5	1.7	1	23	362	384	362	384	0.97
6	12	0.013	0.83	10.5	6.4	1	23	393	416	393	417	0.97
7	12	4.7e-05	0.0029	18.3	1.0	3	23	431	452	430	452	0.96
8	12	1.3e-05	0.00082	20.0	0.2	1	23	458	480	458	480	0.98
9	12	0.00017	0.011	16.5	2.7	1	23	486	508	486	508	0.97
10	12	0.0012	0.077	13.8	0.1	1	23	513	535	513	535	0.97
11	12	5.3e-06	0.00033	21.3	2.4	1	23	541	563	541	563	0.97
12	12	0.055	3.4	8.6	3.9	1	23	569	592	569	592	0.96

Sequence Information

Coding Sequence: ATGAGACCCAAAAACTACATGAAGGAACAAGAATCTGAGCACCTATGCCGAGATTGGAGGCTGTGGTGTCGCTTGTGTGCTAAAGAAACCATGCAAAACAGGCTAAATGTGCTTGTCAAGAGAGAGCAAgcctgcagcagcaacagtaactCATCCGAACACATTGATACCAGGGCACATGAATTGGCTTCTGAAATTAAAAGATTCTTTTCGGTTGATATAACACCTGAAGATGATCTGCCGCGCAGCATTTGCAGTGAATGCAACTCACTAATACAGTTGCTAATCGAAACAACCGCACGAGTTGCAAAAGCGCAGAAAATGTTCCACATGTTGCaaaattcatttgatttaaaGGACATCGATACTAATGAAGTGCGCTATAGGTATGGTCTATCAAATGTTGAAGACGAAACGTATCCGATAATAGCCGAGGTGTACTTGGATGAAAAACAAAAGATGCGAAGTGAATCACCAGAAAGTCAACATGTCGCAAAGAATGTTGCAAATCCTTTAGCTTCAAATCACCCAGATTATATTAAAAGTGAAGAAGATACAGAAGAtgaaaacaatcaaaattcaaCAGATCCAATTCAAACAGTTGAAGATGTCAATGATTACTTGACGCCATTGCTACCTTTAAAGATTAGAAAATGTTTACGTAAATCAGgacaaacaaaatcaaagcaaaaaactGGCCTGAAGAAAAAGTCTATATTACTGTACGAATGTATTCTCTGCCATATTAAGTTTCGATACACTAGTCATTTCGAAGATCATATGAAGCGCGTTCATCAACAGAATGTACACATTGACGAGGATAAAAAGATAGCACCATGTCCACATTgcgaaaagaaatttaaaacaaaatttctccTCAAATCGCATATAAATAGTATACATAAATGCGAACGCCCATTCATTTGTGAAGAGTGTGGGTACACTGCAGGAACAAACGGAGCTCTTAAGAAACACATGTTAATCCATACAGACTATGCGCCCTTTGAGTGCGATGTTTGCCACAAatgttttaaatcaaaaaatcgtCTGCGACGACATAAAGAAATTCACGATCCTACCAAACACACTTGCACCGAATGTGGTCTTGAATTGAATACTCGGGCAACGTATAACCATCATATACTAAtacattcaaagaaaaaaactgaCACACGGTATGAATGCGCCGTATGTCATAGTAAGTTTCGAAATACTAATCATTTCGAAGAACACATGAAACGTGTTCATCATCAGGACGTGCAAATCGACGAGGATAAAAAGATCGCGCCTTGTACATTTTgcgaaaagaaatttaaaaacaagacgCTTTTGGAGTCGCATATTAATAGTATTCACAAATCTGAGCGACCATTCATTTGCGAGGAATGTGGTTTCACTGCAGGAACAAGTTCAAATCTTAAACAACATATGCTAACACACACCGACTATGCGCCATTTGAGTGTGatgtatgcaaaaaatgtttcaaggcGGAATATCTTCTGCGCCGCCATAAGGAAATTCATGATCCCAACAAACACGTTTGCGCTGAGTGTGGTCTTGAATTAAATTCTCGAGCAACACTTAACCGACATCTACTTATACATTCAGATAAAATGGACCACAAATGCGAATACTGCGGGCGAGAATTTAAACGTGCAAATACATTAAAGAACCATTTACTTTTACATACAGGTCTGAAGCCATACGCTTGTGACTTTTGTGATCGTACGTTTGCTAGTGGTTCTAATTGTCGAACACATAAGAAAAAAACTCATCCCGTTGAGCTGGCTGCACAGGAGGCATCTGGTGGAGCAAAATATTGCACACAAAACATACCGAAATTGGCTGAACTGAAGGCAATCACTAAAAATGACAATCATTTATTGCCAATTGGGTCAATGCAGCATGGAAATATTGGAAGGAAACCGCtggaaaaaactttaaaagcaaaattgaaaaaagataaaaaccaAGAGATTAATTTACGTGAAATCACACAACATTCGTCAGAGTCTAATGTACCCTCAATAGATAGCATCTATCAAATGACAAAACGATCAACTGCAATGTCACAGTCTGTTGCAGCAAGTTCAAATATTGCTCTATCGTCAACATTTTCTGAAAATGTTCcgtaa
Protein Sequence: MRPKNYMKEQESEHLCRDWRLWCRLCAKETMQNRLNVLVKREQACSSNSNSSEHIDTRAHELASEIKRFFSVDITPEDDLPRSICSECNSLIQLLIETTARVAKAQKMFHMLQNSFDLKDIDTNEVRYRYGLSNVEDETYPIIAEVYLDEKQKMRSESPESQHVAKNVANPLASNHPDYIKSEEDTEDENNQNSTDPIQTVEDVNDYLTPLLPLKIRKCLRKSGQTKSKQKTGLKKKSILLYECILCHIKFRYTSHFEDHMKRVHQQNVHIDEDKKIAPCPHCEKKFKTKFLLKSHINSIHKCERPFICEECGYTAGTNGALKKHMLIHTDYAPFECDVCHKCFKSKNRLRRHKEIHDPTKHTCTECGLELNTRATYNHHILIHSKKKTDTRYECAVCHSKFRNTNHFEEHMKRVHHQDVQIDEDKKIAPCTFCEKKFKNKTLLESHINSIHKSERPFICEECGFTAGTSSNLKQHMLTHTDYAPFECDVCKKCFKAEYLLRRHKEIHDPNKHVCAECGLELNSRATLNRHLLIHSDKMDHKCEYCGREFKRANTLKNHLLLHTGLKPYACDFCDRTFASGSNCRTHKKKTHPVELAAQEASGGAKYCTQNIPKLAELKAITKNDNHLLPIGSMQHGNIGRKPLEKTLKAKLKKDKNQEINLREITQHSSESNVPSIDSIYQMTKRSTAMSQSVAASSNIALSSTFSENVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -