Basic Information

Insect: Leucophenga maculata
Gene Symbol: -
Assembly: GCA_035044805.1
Location: JAWNNP010002837.1:946500-949613[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 8.5e-05 0.0053 17.5 1.4 2 23 222 243 221 243 0.96

2 16 2.8e-07 1.7e-05 25.3 2.2 2 23 252 274 251 274 0.96

3 16 0.44 27 5.8 0.7 2 23 311 332 310 332 0.95

4 16 0.0072 0.45 11.4 1.1 1 23 414 438 414 438 0.97

5 16 0.031 1.9 9.4 1.4 1 23 475 497 475 497 0.93

6 16 9.4e-06 0.00058 20.5 3.8 1 23 504 527 504 527 0.98

7 16 2.8e-06 0.00017 22.1 1.4 2 23 534 555 533 555 0.96

8 16 0.011 0.7 10.8 0.0 2 21 582 601 581 602 0.94

9 16 0.0021 0.13 13.1 3.5 1 23 652 675 652 675 0.98

10 16 0.035 2.1 9.3 1.1 2 23 713 735 712 735 0.95

11 16 0.00021 0.013 16.2 3.0 2 23 774 796 773 796 0.94

12 16 0.23 14 6.7 0.5 1 23 814 836 814 836 0.93

13 16 0.026 1.6 9.7 3.5 1 23 842 864 842 864 0.99

14 16 4.5e-06 0.00028 21.5 2.0 1 23 870 892 870 892 0.97

15 16 5.6e-06 0.00035 21.2 1.7 1 23 898 920 898 920 0.98

16 16 0.0023 0.14 12.9 0.1 1 22 926 947 926 950 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	8.5e-05	0.0053	17.5	1.4	2	23	222	243	221	243	0.96
2	16	2.8e-07	1.7e-05	25.3	2.2	2	23	252	274	251	274	0.96
3	16	0.44	27	5.8	0.7	2	23	311	332	310	332	0.95
4	16	0.0072	0.45	11.4	1.1	1	23	414	438	414	438	0.97
5	16	0.031	1.9	9.4	1.4	1	23	475	497	475	497	0.93
6	16	9.4e-06	0.00058	20.5	3.8	1	23	504	527	504	527	0.98
7	16	2.8e-06	0.00017	22.1	1.4	2	23	534	555	533	555	0.96
8	16	0.011	0.7	10.8	0.0	2	21	582	601	581	602	0.94
9	16	0.0021	0.13	13.1	3.5	1	23	652	675	652	675	0.98
10	16	0.035	2.1	9.3	1.1	2	23	713	735	712	735	0.95
11	16	0.00021	0.013	16.2	3.0	2	23	774	796	773	796	0.94
12	16	0.23	14	6.7	0.5	1	23	814	836	814	836	0.93
13	16	0.026	1.6	9.7	3.5	1	23	842	864	842	864	0.99
14	16	4.5e-06	0.00028	21.5	2.0	1	23	870	892	870	892	0.97
15	16	5.6e-06	0.00035	21.2	1.7	1	23	898	920	898	920	0.98
16	16	0.0023	0.14	12.9	0.1	1	22	926	947	926	950	0.90

Sequence Information

Coding Sequence: ATGGGTGAAATGTCGCTGTGTCTCACTTGTGATACGAGTAACGACACGGAGCTCTACGAGCTGAAAAAGGCGTACACCGAAAAATATCCGGAAAAGCAACTGCTGGACTTGTTACAGGAGTTATTGCAGATAAACCCAAATATGGCGAATGCTGGACAACTGCCGCAGCATCTTTGTGGCAACtgcacaaaaaaactaaaaaacgccTACGATTTTGTGGTGCAAGCGCGCGAAGCTTACCAGCGTCTACTCGATAGTCTAAAGCCAGACTTAAAGTTAGGCACGGATGTATGTTGCATAGAAGATGTGCCGTTGAAGCAATTTGTAGCTGTTAAACTAGAGCCCGGCGGTGATGATATGACGCCCGTGGAATTTGCTGAAACACTTATGAAGCAGCCAGAATCAGAACAGGATGATGACGACGAAATTCAACACGATTGTGAGGTGCTTGATGAAGGACGTAGTGCAAGTAGTAGCGATGAAATACAGCAACATGATCCTTTAACACCAATAAAGCGCAgaaaagccaaacaaaaggaGTCTCGCGTAAAGGATAAAGTTACGACCGACGACGACACCAACTCCAGTGATGATGATGAGCCACTGATGCAGCGAAaagtaaaaatgcaaaaatctaaACAACAGggcaagaaaaacattttatcatgTAATCAATGCAGCAAAACGTTTCGTTTTCAACGCAGTTTACTTGCGCACATAGAAAAGCATCAACAGAGCATCTACGAAAGTCTTAAATGTCCGGAATGCAAGAAAAAATTCAGTCGCAAGGACAGTTTGCGTATGCAcatgaaaaaaatacatacgCCAACTGATGGAGTGCCACAGCAACATAATCCAAAAATCTGTGAACGTAAGCAGGCAAAAGAACTGGATTTGAATCTCTGCAAGCCGCATGGTTGCAAGTTAATACAGTGCATGTTGTGCTTGGAGTACTTTACCAAAATATCTGAATTACATAGCCATTTGAGTGCACATCCCGATATTGAATCAGTATTGAAACGTGCGGATACTTTAGAGGATGTCGCTGAATTATTCTATCCCGAAATGAAAAAAGACGTTACTGAAGCAACATTGTTGGCGCGTATACGTAAAGATCTCAAAGCGAAAAAGTTTGTGTACTTTTATTCGATAACAAACCAGGCCGGTTACGAGTTAAGAATGGAAAGTTCAGATACGGATGGCGATGAGGATGACAGTATTAATACAAGAAAGCAGCACTACACCTGCGATTTATGCGAAAACACAAGCTTTGGCCGTAGATATCAACTCTTTGAACACCAACGTGTACAACACACCTGGCAGGAGGCACAACACATCTGTCGGCGTTGTAATGCGCATTTTCTCAGTAAACAGTTGCTGCACCATCATTACGAGTCTCAATGTCACAATATACAGAAACGATTTCTATGCAATCGTTGCCCGCAACGCTTTCGCTGGAAACAGAATCTTAAAGCGCACTATACGGAGCACAAGAATAGGatacaGTCATACAAGTGCGAGCAGTGTAATCGTTCCTTTAAGGACAAGAAGTCTTTGTCTTCACACATACACACCGTACACGATGCTTCCAGTATGCTGCCGTGTAAATGGTGCAATCGTTCATTCTATCGACGCGAAAATTTGATAAAGCATTTAAAGCGTCACGGCATTAGGGAGCGCGACTTGCCACTGGCCGAGATACTACTTAAAGCTACAACACAACCCAACGGTGCCAAGCGCATTACTTGCAAGGTTTGTCAACTGCAATTCGAAAGAGTTGCGGATTTAAGAGCGCATATACTAATGGAGCTCAAGTTAAATTTGAGCGCGCATCAGAGCTATAACTCATTAGCCAGTTACTCAATTACAAACGAGGCTGGCTTCGAGTTGCATTTAACTGACTCTGAAACGGATAATGATGAAGCGGGCTCCAGTGCAATGTATAACACACCATACAAGTGCGAGATATGTCAAGTGCAATGTCGACGGCGCTATGAAATGTTTCAGCATCAGCGCGTAATGCACACATTTGATCCCTTGCCGCATACATGCACGAATTGCATTTTTAAAACTGTCTGCAAACGTATAATCGAGCATCACCTACGTACGCATTGTCAAAATACGGAGAAGCAGTTGAGCTGTAAACACTGCAGCTACAAATTTATGTGGCCAGAAAATTTGGAACTACATCAACAAATACAACATGCTGATGTGTTTGTTCCCAAAACTGCAGTTGATGGTAGCAGTGGCGATACAAATGGTGCCCCACAGGCGCAGTCAAAGCCACAGGAGTCGAAAACAGCAACAACGGAATTGTTAAACTGTCCACATTGCGATCGCACTTATCAGCATCAATCACGTCTTAATAATCACATACGTGATGTGCACAGTGAAAATAGCGaggcaaacaaaaagaagaaaaaggaatCGGCACCTAAATTCCTGTGTTCACATTGTGGCAAGGAGGAGCCATCTGCCTCCCGTTTGGTCATGCACGTACGGCAACATACTGgCGAGAAGCCCTTTAAATGCGATTTATGCGAAATGTATTTTTCACAACACGTTAAAATGTTGATACACCGTAGAAAGCACACTGGCGAGAAACCCTATCATTGTACTGTCTGCGGCAAGGACTTCGCACGTTCTGACAAACTAAAGCgccacacactcatacacagcGGACTGAAACCGTACAAATGTACGCTCTGCGAGAAGAGCTATCGTCAAGCAAAAGATCTCAAGTTGCACATGCAACAGCATACCGGAGAAACACCATTCGAGTGCGCTACATGCGGCGAACGTTTCATAGAGCGTGTAACACTGGAGAAGCATCGCATTATGCGTGGACATTTCGATGagatgcaataa
Protein Sequence: MGEMSLCLTCDTSNDTELYELKKAYTEKYPEKQLLDLLQELLQINPNMANAGQLPQHLCGNCTKKLKNAYDFVVQAREAYQRLLDSLKPDLKLGTDVCCIEDVPLKQFVAVKLEPGGDDMTPVEFAETLMKQPESEQDDDDEIQHDCEVLDEGRSASSSDEIQQHDPLTPIKRRKAKQKESRVKDKVTTDDDTNSSDDDEPLMQRKVKMQKSKQQGKKNILSCNQCSKTFRFQRSLLAHIEKHQQSIYESLKCPECKKKFSRKDSLRMHMKKIHTPTDGVPQQHNPKICERKQAKELDLNLCKPHGCKLIQCMLCLEYFTKISELHSHLSAHPDIESVLKRADTLEDVAELFYPEMKKDVTEATLLARIRKDLKAKKFVYFYSITNQAGYELRMESSDTDGDEDDSINTRKQHYTCDLCENTSFGRRYQLFEHQRVQHTWQEAQHICRRCNAHFLSKQLLHHHYESQCHNIQKRFLCNRCPQRFRWKQNLKAHYTEHKNRIQSYKCEQCNRSFKDKKSLSSHIHTVHDASSMLPCKWCNRSFYRRENLIKHLKRHGIRERDLPLAEILLKATTQPNGAKRITCKVCQLQFERVADLRAHILMELKLNLSAHQSYNSLASYSITNEAGFELHLTDSETDNDEAGSSAMYNTPYKCEICQVQCRRRYEMFQHQRVMHTFDPLPHTCTNCIFKTVCKRIIEHHLRTHCQNTEKQLSCKHCSYKFMWPENLELHQQIQHADVFVPKTAVDGSSGDTNGAPQAQSKPQESKTATTELLNCPHCDRTYQHQSRLNNHIRDVHSENSEANKKKKKESAPKFLCSHCGKEEPSASRLVMHVRQHTGEKPFKCDLCEMYFSQHVKMLIHRRKHTGEKPYHCTVCGKDFARSDKLKRHTLIHSGLKPYKCTLCEKSYRQAKDLKLHMQQHTGETPFECATCGERFIERVTLEKHRIMRGHFDEMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00891209;
90% Identity: -
80% Identity: -