Basic Information

Insect: Leucophenga maculata
Gene Symbol: su(Hw)
Assembly: GCA_035044805.1
Location: JAWNNP010002997.1:1164801-1167603[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0011 0.065 14.0 1.6 1 20 149 168 149 170 0.94

2 12 4.5e-06 0.00028 21.5 0.3 3 23 221 242 219 242 0.93

3 12 0.011 0.66 10.9 0.3 1 23 248 270 248 270 0.95

4 12 6.2e-07 3.8e-05 24.2 2.4 1 21 277 297 277 298 0.95

5 12 3.6e-06 0.00022 21.8 0.8 2 23 310 331 309 331 0.96

6 12 0.00012 0.0073 17.0 5.3 1 23 342 364 342 364 0.99

7 12 0.00028 0.017 15.9 0.7 1 23 370 392 370 392 0.97

8 12 1.8e-05 0.0011 19.6 0.8 1 23 398 420 398 420 0.99

9 12 2.3e-06 0.00014 22.4 3.1 1 23 426 448 426 448 0.98

10 12 0.00012 0.0075 17.0 2.5 1 23 452 474 452 474 0.97

11 12 4.7e-05 0.0029 18.3 0.1 1 22 486 507 486 510 0.91

12 12 0.015 0.95 10.4 0.0 3 23 528 549 527 549 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0011	0.065	14.0	1.6	1	20	149	168	149	170	0.94
2	12	4.5e-06	0.00028	21.5	0.3	3	23	221	242	219	242	0.93
3	12	0.011	0.66	10.9	0.3	1	23	248	270	248	270	0.95
4	12	6.2e-07	3.8e-05	24.2	2.4	1	21	277	297	277	298	0.95
5	12	3.6e-06	0.00022	21.8	0.8	2	23	310	331	309	331	0.96
6	12	0.00012	0.0073	17.0	5.3	1	23	342	364	342	364	0.99
7	12	0.00028	0.017	15.9	0.7	1	23	370	392	370	392	0.97
8	12	1.8e-05	0.0011	19.6	0.8	1	23	398	420	398	420	0.99
9	12	2.3e-06	0.00014	22.4	3.1	1	23	426	448	426	448	0.98
10	12	0.00012	0.0075	17.0	2.5	1	23	452	474	452	474	0.97
11	12	4.7e-05	0.0029	18.3	0.1	1	22	486	507	486	510	0.91
12	12	0.015	0.95	10.4	0.0	3	23	528	549	527	549	0.92

Sequence Information

Coding Sequence: atgagtCCAAAGAAAGCATTGGTTCAGAAGTCCAAGCGTGGTAGTGGTGGCGCTTCCGGCATTAAAATTCTCAATGAAGAGAAAATTCCTTCAATATCATCTTCTCAATTTTCGGCACCGGAGTCGACTACATTACCTCCCACAAAAGGAGTAAACACCTTGACTATATCAACAAAAGCTAAAACTTCGCTTACAACAAAGAGCAAGCAAGAGCACTACGTAATGCAAACAGTGAAAAATGAGTCTGCTAATTCTACTGGGGCTGTGGTAACATTAGTCGCAGACGATGACACAATTGATTTTGTACTGGCCGAAAACAATACAGAGGAACGATCAGGCATGTCGAAGAATGTTGAAGAGCGCGATATGGCGATTGGTGAAGAGCTCCATCTAAGTGGGGAGGAGCTTGAGGGCGAAAGTACTCAAGTTAAAGAAATTGTTGAACATGTTTGCGGTAAATGTTATAAAACTTTCCGTCGTGTTAAAAGTTTGATGAAGCATTTGGAGTTTTGTCGCTTCGATAGCGGCTACCATCTGCGAAAAGctgaaatgctaaaaaatattgaaaaaattgagAAAGATGCTgtaattatggaaaaaaaagatatttgctTCTGCTGTAGCGAGAGCTACGACACTTTTCATCTTGGTCACATCAATTGTCCAGATTGTCCGAAATCGTTCAAAACCCAAGTGAGTTATGAACGTCATATATTTATAACACATTCGGAGTTGAGCGACTATCCTTGTTCAATATGTAATGCTAAGCTACGCAGCAAGACCTTATTGAAATTGCATGAAGAGCAACACAAAAACCGAGGAAAGCCTTATGCATGTAAGATTTGTGGTAAAGATTTCACCCGATCGTACCACCTCAAGCGTCATCAGAAGTATTCGTCTTGTTCAACCAACGAAAATGACACCATGAGTTGCAAAGTGTGTGATAAGGTCTTCTTCCGCCTAGATAATTTGCGTGCTCATTTGAAGCAACACTTGGGCACACAGATCGCGAAGAAACCAGAGTACATGTGTCACGtatgcaaaaattgtttttacagtTTGTCAACTTTAAAtattcacATTAGAACACATACAAAGGAAAAACCGTTTGCGTGTGATCTGtgtgaaaaaaagttttctgcATTGGTGGCCTTAAAAAAGCATCGCCGCTACCACACCGGAGAGAAACCTTATACATGCACTGTGTGCAGTCAATCATTTGCTGTCAAAGAGGTACTAAATCGTCACATGAAGCGACACACTGGCGAACGTCCACATCAGTGCAAAGAATGTGGTAAAAGCTTCATTCAGGCAACGCAGTTGCGAACCCACAATAAAACACATCTAAGGCCGTTCGAATGCAAAGAGTGTGAAGAAAAATTCAAGACACAAAAACAacttGATCGTCATAGTAAAAATCATGGCAAGGTGAAGCGAACCAAGAAAGAACGACCCTTTGAATGTTCGATTTGCAATCAAAGTTTTAGCCTTGAAGAGGATTTGAAAGCACACATGGCAAAAGGAGATCATAAGCCACCTGCAAAGAGAACAAaacgtaataaaattaatgaacgGAGGGACTGCGCTGTTTGCGATAAAGTCTTCGACACACCTGAAGGTCTGCGCTTTCATATACTTCAAGTACACGATTGCGATCCTGAAGATATTTTCGGAGAAAAACCACCATGTAAAAGTGACGAGAAAGATGAGCTATCTGCTATTTCTTCAACTAAACTAATTTCATCTAATGGCGATAGTAATGGTGTTGTAGTGCGTGAGTTTCTTGTTGATGAAGTACCTACTAGCGGCTCGGGAACATCGCAGCAAACTATAATATTAGAAAATCAGGCGTACACTGTAATACCGTTTGAAAACTTAGAAGAAATGGACTCTAAAATTCCTTCTACAAGTAAAACTAAACTTCAAGATTCGCCTGCTGCAAAGAAACAACGAAGATCGCTTGCAGCAAGTTTGGCAGCTGCTATTGCCGATAATGATGATGTCGTGATTACTGATGATGAGAGTGCTAGCCCAGACGTTATGACCGAAGAAGATCTTAAACTTAAAGCAAACGTGTCAAAACTACTCGATATTCTGGTGGACAATACCACATTAAAGAAATTTGGTTGGCCGGAAACTTCTGAAGAAATTGTGCTTTGCAAAGTTATTGAAAATTGCGGCCATGAGTTGTCAAAGGATAGTGAAAACTATAATGCACTTGACTATGCAACTCGCATACGTGAGTATTTGAAACTGTTGCTAAAGTTGGTTGCACACAAAAACTCCATTAAGGAACTATTAAATAACTATTCCATTGACGAAGTAATTGAATATGTTTTGGGGAACGATGACAGCGATGACGAACAACTGGGCGAAgagaaataa
Protein Sequence: MSPKKALVQKSKRGSGGASGIKILNEEKIPSISSSQFSAPESTTLPPTKGVNTLTISTKAKTSLTTKSKQEHYVMQTVKNESANSTGAVVTLVADDDTIDFVLAENNTEERSGMSKNVEERDMAIGEELHLSGEELEGESTQVKEIVEHVCGKCYKTFRRVKSLMKHLEFCRFDSGYHLRKAEMLKNIEKIEKDAVIMEKKDICFCCSESYDTFHLGHINCPDCPKSFKTQVSYERHIFITHSELSDYPCSICNAKLRSKTLLKLHEEQHKNRGKPYACKICGKDFTRSYHLKRHQKYSSCSTNENDTMSCKVCDKVFFRLDNLRAHLKQHLGTQIAKKPEYMCHVCKNCFYSLSTLNIHIRTHTKEKPFACDLCEKKFSALVALKKHRRYHTGEKPYTCTVCSQSFAVKEVLNRHMKRHTGERPHQCKECGKSFIQATQLRTHNKTHLRPFECKECEEKFKTQKQLDRHSKNHGKVKRTKKERPFECSICNQSFSLEEDLKAHMAKGDHKPPAKRTKRNKINERRDCAVCDKVFDTPEGLRFHILQVHDCDPEDIFGEKPPCKSDEKDELSAISSTKLISSNGDSNGVVVREFLVDEVPTSGSGTSQQTIILENQAYTVIPFENLEEMDSKIPSTSKTKLQDSPAAKKQRRSLAASLAAAIADNDDVVITDDESASPDVMTEEDLKLKANVSKLLDILVDNTTLKKFGWPETSEEIVLCKVIENCGHELSKDSENYNALDYATRIREYLKLLLKLVAHKNSIKELLNNYSIDEVIEYVLGNDDSDDEQLGEEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00892060;
90% Identity: -
80% Identity: -