Basic Information

Insect: Leucophenga maculata
Gene Symbol: -
Assembly: GCA_035044805.1
Location: JAWNNP010000945.1:945306-948451[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00018 0.011 16.4 3.5 2 21 239 258 238 262 0.91

2 12 0.0036 0.22 12.3 0.1 1 23 264 286 264 286 0.97

3 12 3.7e-06 0.00023 21.7 0.9 2 23 294 315 294 315 0.98

4 12 0.00022 0.014 16.2 2.1 1 23 321 343 321 343 0.98

5 12 0.00011 0.0068 17.1 5.7 1 23 349 371 349 371 0.98

6 12 0.0063 0.39 11.6 0.8 1 23 377 399 377 399 0.95

7 12 6.4e-08 3.9e-06 27.3 2.7 1 23 466 488 466 488 0.99

8 12 1.8e-06 0.00011 22.7 1.5 1 23 494 516 494 516 0.97

9 12 0.012 0.76 10.7 0.2 1 21 522 542 522 543 0.95

10 12 2.5e-06 0.00016 22.3 3.2 1 23 611 633 611 633 0.99

11 12 1e-06 6.2e-05 23.5 3.2 1 23 639 661 639 661 0.98

12 12 3.7e-05 0.0023 18.6 1.5 1 23 667 689 667 689 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00018	0.011	16.4	3.5	2	21	239	258	238	262	0.91
2	12	0.0036	0.22	12.3	0.1	1	23	264	286	264	286	0.97
3	12	3.7e-06	0.00023	21.7	0.9	2	23	294	315	294	315	0.98
4	12	0.00022	0.014	16.2	2.1	1	23	321	343	321	343	0.98
5	12	0.00011	0.0068	17.1	5.7	1	23	349	371	349	371	0.98
6	12	0.0063	0.39	11.6	0.8	1	23	377	399	377	399	0.95
7	12	6.4e-08	3.9e-06	27.3	2.7	1	23	466	488	466	488	0.99
8	12	1.8e-06	0.00011	22.7	1.5	1	23	494	516	494	516	0.97
9	12	0.012	0.76	10.7	0.2	1	21	522	542	522	543	0.95
10	12	2.5e-06	0.00016	22.3	3.2	1	23	611	633	611	633	0.99
11	12	1e-06	6.2e-05	23.5	3.2	1	23	639	661	639	661	0.98
12	12	3.7e-05	0.0023	18.6	1.5	1	23	667	689	667	689	0.97

Sequence Information

Coding Sequence: ATGAGTACACTTAGTCATGATTTTGCAATTACTTGCCGTTTCTGCACACGCCGCGAAGTGGATGACATGCAAGACTTACTAAAACTTCAGTCCTTGCACAATTTTGCACCGGAGTTATACAGCACCATGAGTATTGCGGAAttattaacagcaacaacgccGTGGATCGAAATCAGTCCCTCCGATGGACTGCCTCAGGTTATATGTGATAATTGTTTGGAGAAGTTGTTGAAAGTGCAGAGATTCCAGGAGATGTGTGCAGAGTCGGagaaaaacttgaaatatttgattacaaatggcacaaataaacaatttgaaacacTTGATGATGATTCAACAATCGACATCAATGCTGCAATTGTTAAAGAAGAACTAGAAATCGAAGATTTAAGCTGGCAGGAAGTGGAAGCAGAAAACCAaaaCAGATTACTTTATCCCACGGATGACGTTACAACATCTGACGCATTTGGTATGGGTTTATTGCCAACCGTGGAGAACATGGAGCAGTCCTTTTTTGTGGGAAATATGTACACCAACGATATGTATTTAGATGAAACAGACAAATCAAATACTGATGCAACAAGTTTCATAAGCGAAAATGCATCGACATTTTATAATGGTGATAATGATGATAACAATGGCAGTTGGGAAGAAGCATCTATTGACGAGCAGCCTGCACTGACAcagGGTTTTCTACAGTTGCGCCGTAAAATAAAGTGCAACAAGTGCGGCAAAACTTTTGTTACTTTTAAAGcgttaaaaaaacacaaaatgggCAATTGTCATCGCTATCAATGTACACAGTGTCCGAAATGGTTTGTATATCCAAGTAAACTGGCGGAGCATGAGGCCGTACATGCGAAAGTGTCGAAATATCGTACATGCCCAATCTGTAACAAATCCTTTACACTACAAAAGCTATTGGATAAACACATGAAGATACATGAACAAGAGAAACAGCACAAGTGTCAACAATGTAATTTGAgTTTTAATTATGGTTCAGAATTGGCACGTCACCTACAGTCGCACTCCATCGAAAGGCCCTTTAAATGCACTTACTGTGAGCTAAGTTATACGCAAAGAGCACACCTTATCAGACATCTTCATAAGCATCTTGGCAGTAAGGTGCATACTTGTGAACTTTGCCCAGCGCGTTTCGAGTTTGCCGTAGAACTGAAAAAGCACCGCACTGACCATGACTATGAGGATGATGACACACGTGCGAATAATTTGGCAGCAAGACAAAGAAGTGAGCAGGAACTAAAAATAAACGTTAACATTGATGCCGCCGACGAAACTATGGAAAGTTTGCCAGCATCTCCTACTGCTTCTATTTCACCTGCGCCGTACCAAATGTGTGAGCCAACGATGCACAATGAGATTAAGGAAAAACCATACACCTGTACTGTCTGCGATAAGCGTTTCGTCAACAGCTCACAGCTAACGCGTCATACACGAAAACACACGGGCGAGCAACCATTCACATGCAGATACTGTGATCGAGCCTTTTCACAACAGGCCAATCTGATACGACATTTCAAATTGCATGTtggtaataaaatttataattgtaaattttgtccAAGTGGTTTTCGTTTGGCCTCCGAACTGCGTGCGCATTACAAGGACTGTTTTCCTGCGACAAATAATGATGTTGGTGGTAATACAGCAGATAATgtaacaacaacacaaatgacCGCGAACCTATTGAAGGATAATGCTATGCAAGATATTAATTTCACTCAAAGTGAATTTCACTCAAAGAAAAAGGAAACAATGCAAATGAAGAATAATCATGACATGTTGGATCATCacaaaaaacctttaaaatacAAATGTGACAGCTGCAACAAACGCTTTCCGCAACAACTACATTTGCAACGCCATATGAACATACACACTGGCGACAGACCGTACAAATGTCAATATTGTGACCGAAGTTATAGACAACAAGCCCATCTTATCAGGCATCTTCAGTTACACCTTGGTGACGAAGTCTACAGTTGTCCGCATTGTCCACGTGGCTATCGTTTAAAATCTGAATTGATAAGGCATAAGAAAGAGCATGACGTTGAGGATTTTGAGACCAGAACACGTAACCTTGTTGCTCGTCAAGAAAAAGATGCCGAATTAAAAATGCGATTAAGCGGCATTTCACCAAGCACTTAa
Protein Sequence: MSTLSHDFAITCRFCTRREVDDMQDLLKLQSLHNFAPELYSTMSIAELLTATTPWIEISPSDGLPQVICDNCLEKLLKVQRFQEMCAESEKNLKYLITNGTNKQFETLDDDSTIDINAAIVKEELEIEDLSWQEVEAENQNRLLYPTDDVTTSDAFGMGLLPTVENMEQSFFVGNMYTNDMYLDETDKSNTDATSFISENASTFYNGDNDDNNGSWEEASIDEQPALTQGFLQLRRKIKCNKCGKTFVTFKALKKHKMGNCHRYQCTQCPKWFVYPSKLAEHEAVHAKVSKYRTCPICNKSFTLQKLLDKHMKIHEQEKQHKCQQCNLSFNYGSELARHLQSHSIERPFKCTYCELSYTQRAHLIRHLHKHLGSKVHTCELCPARFEFAVELKKHRTDHDYEDDDTRANNLAARQRSEQELKINVNIDAADETMESLPASPTASISPAPYQMCEPTMHNEIKEKPYTCTVCDKRFVNSSQLTRHTRKHTGEQPFTCRYCDRAFSQQANLIRHFKLHVGNKIYNCKFCPSGFRLASELRAHYKDCFPATNNDVGGNTADNVTTTQMTANLLKDNAMQDINFTQSEFHSKKKETMQMKNNHDMLDHHKKPLKYKCDSCNKRFPQQLHLQRHMNIHTGDRPYKCQYCDRSYRQQAHLIRHLQLHLGDEVYSCPHCPRGYRLKSELIRHKKEHDVEDFETRTRNLVARQEKDAELKMRLSGISPST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -