Basic Information

Insect: Leucophenga maculata
Gene Symbol: -
Assembly: GCA_035044805.1
Location: JAWNNP010002956.1:2563688-2568400[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 4.3e-06 0.00027 21.5 0.6 1 23 110 132 110 132 0.98

2 21 0.023 1.4 9.8 0.1 3 21 139 157 138 161 0.90

3 21 0.00056 0.035 14.9 4.1 2 23 164 185 164 185 0.98

4 21 2.5e-05 0.0016 19.1 3.1 1 23 191 213 191 213 0.99

5 21 0.0011 0.066 14.0 0.9 1 23 219 241 219 241 0.94

6 21 0.0011 0.07 13.9 9.4 1 23 298 319 298 319 0.98

7 21 6.4e-07 4e-05 24.1 4.3 1 23 325 347 325 347 0.99

8 21 0.0021 0.13 13.1 1.9 1 23 353 375 353 375 0.95

9 21 9.1e-05 0.0056 17.4 3.2 1 23 417 439 417 439 0.99

10 21 0.00022 0.013 16.2 0.6 1 23 445 467 445 467 0.99

11 21 0.00063 0.039 14.7 0.9 1 23 473 495 473 495 0.96

12 21 8.6e-07 5.3e-05 23.8 1.1 1 23 535 557 535 557 0.98

13 21 0.00016 0.01 16.6 6.3 1 23 563 585 563 585 0.99

14 21 1.1e-05 0.00067 20.3 0.6 1 23 591 613 591 613 0.97

15 21 1.1 67 4.6 0.2 9 23 743 757 741 757 0.91

16 21 5e-05 0.0031 18.2 5.9 1 23 772 794 772 794 0.98

17 21 1.1e-05 0.00068 20.3 0.9 1 23 800 822 800 822 0.99

18 21 0.0087 0.54 11.1 0.7 1 23 828 850 828 850 0.95

19 21 2.3e-05 0.0014 19.2 2.5 1 23 889 911 889 911 0.98

20 21 0.0054 0.33 11.8 3.7 1 23 917 939 917 939 0.99

21 21 0.0013 0.082 13.7 0.5 1 23 945 967 945 967 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	4.3e-06	0.00027	21.5	0.6	1	23	110	132	110	132	0.98
2	21	0.023	1.4	9.8	0.1	3	21	139	157	138	161	0.90
3	21	0.00056	0.035	14.9	4.1	2	23	164	185	164	185	0.98
4	21	2.5e-05	0.0016	19.1	3.1	1	23	191	213	191	213	0.99
5	21	0.0011	0.066	14.0	0.9	1	23	219	241	219	241	0.94
6	21	0.0011	0.07	13.9	9.4	1	23	298	319	298	319	0.98
7	21	6.4e-07	4e-05	24.1	4.3	1	23	325	347	325	347	0.99
8	21	0.0021	0.13	13.1	1.9	1	23	353	375	353	375	0.95
9	21	9.1e-05	0.0056	17.4	3.2	1	23	417	439	417	439	0.99
10	21	0.00022	0.013	16.2	0.6	1	23	445	467	445	467	0.99
11	21	0.00063	0.039	14.7	0.9	1	23	473	495	473	495	0.96
12	21	8.6e-07	5.3e-05	23.8	1.1	1	23	535	557	535	557	0.98
13	21	0.00016	0.01	16.6	6.3	1	23	563	585	563	585	0.99
14	21	1.1e-05	0.00067	20.3	0.6	1	23	591	613	591	613	0.97
15	21	1.1	67	4.6	0.2	9	23	743	757	741	757	0.91
16	21	5e-05	0.0031	18.2	5.9	1	23	772	794	772	794	0.98
17	21	1.1e-05	0.00068	20.3	0.9	1	23	800	822	800	822	0.99
18	21	0.0087	0.54	11.1	0.7	1	23	828	850	828	850	0.95
19	21	2.3e-05	0.0014	19.2	2.5	1	23	889	911	889	911	0.98
20	21	0.0054	0.33	11.8	3.7	1	23	917	939	917	939	0.99
21	21	0.0013	0.082	13.7	0.5	1	23	945	967	945	967	0.95

Sequence Information

Coding Sequence: ATGGATTGCGTTAAAGAGGAAATGTGTGACAACGATGAAGATTTGGCTTCAACGCCGATGAATATGGTGGTTGTTAAAGAAGAACTCGATTTGGAAGACATTGTTTGGCCGGAGGAAGAGTTCTCGGCTGATGCATTAAGTACAAACAACGTATTAAACGAAAAAGAAGCAACAATTATTTACAATCAAGAAGATATGGAAAGCGAGCAATTACAATCAGAGAAATCGCTTGAAATTCAAAGCACATTTTTGTGCGAATGTAGAATACACTTCTTGACTGCTGAGGAATTAAACGAACACATGTTGCAAAACGACCACAAAGAGCGCTTTCAGTGTACGATTTGTCCAAAATCCTATTCCGACAAACGCGCTGTTAGAAAGCATATACTGTCGCACCGTAACAATCAAGTAGCTTGTGAAATGTGTGGTGAAGCATTTGAAGGACGTGATAAATTGCGTGAACATGCCAAACTTTATAAACATGAACGAAAATGTGAACACTGTGGCAAGCGTTTTCATTTGATTGAATCCTTGCGTATGCATATGCGTATACACACGGGTGAAAAGCCGTACAAGTGTAAATATTGCGAACGGGTATTCAGTTTCAGTATGCTCTACATCAGACATCTTCGAAAGCATCTTGGCGAGGAAATTTATATTTGTGAACTTTGCCCGCGTGGATTTAAAAAACACTCGGAACTACAAATGCATAGTCTGGAACATAAAAGTGATGATGCTGAGACGCGTGAAAGAAATCTAGCTGCGCTGGAGAAGAAGGAAGCtgaaattaaatggaaaataagcAATGCGCCAACCATAGCAGAAGCTAACCAATTGGGAAAGCGAACGTACAAATGGAAGATAAAACGTGAAAAGTTAGGAGAAACATTGCACAAATGTGATTTCTGCGATAAATGctttcataaaaataatttacagacGCATATGCGTGCGCACACAGGCGAGCAGCCATACAAGTGCAAGTACTGTGAAAAGACATTTCCTCATGGCTCCAATTACATACGGCATATGCGAACACATCTTGGCgatgaaatttatatttgtgaGCTATGCCCACGCAGCTTTCAGAAACTCAATGATCTGCGTAAGCACCATACGGAACATGAAAACGATGATGCTGAGACACGTGCAACTAATCTTGCCGCGCTACAAGCAAAGGAAACGGAAATAAGAATGAAAATTTCTACACAAGTCACAGAAGcACTTAAtcagttaaaagaaaaactttataaatgtaACATCTGCGAAGTACGCTACTGCAGTAAACAAGCTTTAAGTAGTCACATGCGTAGACACACTGGCGAGCAAgcatacaaatgtaaatattgtgCAGAGGGTTTTACGGTTGCTTACGCTTACAGCCGACATCTACAAACACATCTTGGCGATGAGATTTACACTTGTCAATTGTGTCCACGTGGCTTTCAAAAATCCACTGAACTAAAGAAACACTATGCGGAACATAAAAGTGATGATGCTGCGACACGCGCAAGAAATCTAGCTGAGCTGCAAATAAAAGAGGACGAACGGAGACTAGCATGCAATATTTCGGCAGATGTGAGCCAGTTGCAAGAAAAATCGTATAATTGTGACATCTGTGAAATTAGTTTTAGCAAGAAGGATACTTTGAATAATCACATGCGTAGACACACGGGCGAACAACCTTACAAATGTAAATACTGTGAAAAGTCTTTTTCTCATGGTACCACTTACACGCGGCACCTTCAAAAACATCTTGGTGATGAAATTTACGCTTGTGATCTTTGTCCACGTAGTTTTCAAAGATCAAATGAACTAAAAAAGCATATTAAGGAACATGAAAATGTAGCAGTAGAAATACCGCCAGCAACTTCAAAAGCACATTTAACATGTAAAGCAGCACATCACCAGTTGCCTCATGATACTGTTCTGCTCTATCAGTTTGCACCGGAAAGCACTTGTGGAAAAATGCCAAGGAAGCTGCTTAGAAAGCAAGAATTAAATGTGACGGATGAAGACTTTGCATCAATGTCAATGCATCCGGTAATTGTTAAAGAAGAAGTGGACTTGGAAGACCTAGTATGGACGGACGAAGTGCACAATGACAACGTATCAACTTTTGCTATTAACAGTGAAAGTAACAACGAAGAAAATGTTCATATAACACAAGAACTTACTGAAGAATCAATTGAAGTAGGGAGTTCACATTTAAGCAAGAACAGAATAAAGTTTTCTAACGCTAAGGAGTTAAAAGCACATATCTTTCAGCACACACAAAGCCGTGACACAAATCAACACAACGAGGAAAGACCACACAAATGTGAACATTGTGGCAAATGTTTTCGTACAGCTGAATCTATAATTACACATATTCAAAAGCATAATGTTGAACATCAATACAAGTGtaaatactgcgaagaatctttcaaTCTAGCTGCCAATTACAATGAACATCTCCGCACACATCTCGGtgatgaaatttatatttgtgcACTTTGTCCGCGTAGCTTCCAAAAATATGCTAAACTACAACAGCACTATACGGAGCATAAAAATGATAATGCTGAGACACGCGCGAGAAATCTAGCTGCGCTGCAAAAGAAAGAACAGAACTTGACACACAAACAACGCCGTGACACAAAACCACACAACCAGGAAAGACCACACAAGTGTGAACATTGTGGCAAAGGTTTCCGTACAGCTGAATCTATAATTACGCATATTCAAAAACATACTTTTGAACATCAATACAAGTGTAAATACTGCGTACAATCATTCCATCTAGCTGCCAAGTACAAAGAACATCTCCGCACACATCTCGGCAAGCACATTTATATTTGTGCACTTTGTCCGCGTAGCTTCCAAAAATACTCGGAACTACAACAGCACTATACGGCGCATAAAAATGATAATGCTGCGACACGCGCAAGAAATCTAGCAGCGTTGCAAAAGCGAGAAGCTGAAATAAAGTTAAAAGGAAACAGTTTGCAAGTAGAGACAGAAGGTTCTGAATGA
Protein Sequence: MDCVKEEMCDNDEDLASTPMNMVVVKEELDLEDIVWPEEEFSADALSTNNVLNEKEATIIYNQEDMESEQLQSEKSLEIQSTFLCECRIHFLTAEELNEHMLQNDHKERFQCTICPKSYSDKRAVRKHILSHRNNQVACEMCGEAFEGRDKLREHAKLYKHERKCEHCGKRFHLIESLRMHMRIHTGEKPYKCKYCERVFSFSMLYIRHLRKHLGEEIYICELCPRGFKKHSELQMHSLEHKSDDAETRERNLAALEKKEAEIKWKISNAPTIAEANQLGKRTYKWKIKREKLGETLHKCDFCDKCFHKNNLQTHMRAHTGEQPYKCKYCEKTFPHGSNYIRHMRTHLGDEIYICELCPRSFQKLNDLRKHHTEHENDDAETRATNLAALQAKETEIRMKISTQVTEALNQLKEKLYKCNICEVRYCSKQALSSHMRRHTGEQAYKCKYCAEGFTVAYAYSRHLQTHLGDEIYTCQLCPRGFQKSTELKKHYAEHKSDDAATRARNLAELQIKEDERRLACNISADVSQLQEKSYNCDICEISFSKKDTLNNHMRRHTGEQPYKCKYCEKSFSHGTTYTRHLQKHLGDEIYACDLCPRSFQRSNELKKHIKEHENVAVEIPPATSKAHLTCKAAHHQLPHDTVLLYQFAPESTCGKMPRKLLRKQELNVTDEDFASMSMHPVIVKEEVDLEDLVWTDEVHNDNVSTFAINSESNNEENVHITQELTEESIEVGSSHLSKNRIKFSNAKELKAHIFQHTQSRDTNQHNEERPHKCEHCGKCFRTAESIITHIQKHNVEHQYKCKYCEESFNLAANYNEHLRTHLGDEIYICALCPRSFQKYAKLQQHYTEHKNDNAETRARNLAALQKKEQNLTHKQRRDTKPHNQERPHKCEHCGKGFRTAESIITHIQKHTFEHQYKCKYCVQSFHLAAKYKEHLRTHLGKHIYICALCPRSFQKYSELQQHYTAHKNDNAATRARNLAALQKREAEIKLKGNSLQVETEGSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -