Lmac000571.1
Basic Information
- Insect
- Leucophenga maculata
- Gene Symbol
- bab2
- Assembly
- GCA_035044805.1
- Location
- JAWNNP010000140.1:175830-178127[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-09 2.3e-06 27.5 0.0 2 42 415 455 414 458 0.87 2 2 0.51 1.2e+03 -0.3 0.0 28 34 539 545 539 551 0.85
Sequence Information
- Coding Sequence
- ATGGGAGGACCACAACCAGCGCCCGTAGCAGCACCAGCCGTTGCGCCAGCCGGCGAGGGTCAAACCTATTGTTTGCGTTGGAATAATCATCAGACAAATCTGGTACAGATATTACATGCACTGCATGAGGTCGATAGCTACGTTGATTGTACACTTGTCGCCGATGATGAACAGTTTAAGGCACATCGTGTGGTACTTGCTGCCAATTCGCCATATTTCCAAACTATACTGCAAGATGTACCGCAAGATCATTGCAGCATTATATTGCCGGGCGTAAAGTCATTCGAAATTGCTGCGCTACTGCAATATATGTACACCGGGGAGACTACCGTGACAAAAAGTCAAGAGCCGGAGATCTTGCGTACCGCTAAAGAGTTGCAAGTCAAAGGTTTATATGATAACCTTATGAAATTCAACCAGAAAACTGTGGAACCACATTATTCCAGCTCAACGCCGCATACTGCTTATGCTGCAGCAGCGACGTCGTCCTCAACGTCGTCGTCAGCAGTTGAAAGCAATACTAAAAATGGTGCCATTTTAAATGGTAACATGGATGCTTATGCAGCACACAATTCCTCTGCTGTGATCTCAACCTCAACACACAATGTTTCACCGAATGCTGCCATTACGAGTAGTTCCTCACCGCCATACAGCGGTGTATCAGCCAGTGGTGGCGTTGGCGCTGCAGCTACCTATCAACAGCCGCCAtatagcagcagtagcagcggcaTGTATCGCAGTAAATCGCCAGTAAGTGCTCCAACAGAAACACCAACCAATGCTGGGCAAAATGCTGCCGCTGAGCGTGCTGCATGGCCCCTCTCACCCAGCGCTGCTGCCGCAGCTGCTATGCTCAATTCTGTCTATGAATCCGCTGCCGACATGAATCCTTTAAAACGTAAGAAGCTCTCTGCCATCTCCAGCATGTTTATGAATCGTGATACGCCCATACTGCGTAATGTCTTGGCCAATCCTGCTGATTCCTCACAACCGAATCCATTGCTGTTGCCAGGCGTTTTTAAAAATGATAAGCAAAGCAGCGCTGAGAAgcaagcagctgctgctgccgcagcaGCACATGGCGCTAATAATAATCACAGTTTTAATGGCTCTGATTATGGCTCCGAAAAgTATCACGACGAACCACTCTCACCGCACACCGATCGTTCCTTCGACGATGAGGCGGGCAACAATTCCAGCAGCGGCAAGAAACCCGAATGGAAGCGTTACAAGCAATATACACGCAACGATATGATGTGCGCCATACAATGTGTGCGCGAAGGCATGTCTGCGCTGCAGGCTTCACGTAAATTTGGTTTACCATCACGCACGCTGTACGACAAAGTGCGCAAGCTGAATATTAATACCGGCCGCGGCACAGGACGTACACCCAAGCGTAGTCCGCCCGGCGCTGTAGAATCTTCAGCAGCATTTCCATATCATGCACATGGTTACGGTCAGAATGAGCCATTGTTGTCGTCAATGCATGAAGCGCGTGAAGAGCGAGAAGCCAAGGAGCATCTACAccatcagcaacaacatcagcaacgtgccgaagctgctgctgccgctgttgctgctgctgcagcagcgcaTCATATACCACCAAATGCCATACCGCATTCCACGCTGTTGGATCATGCTTTTCTGCAACAGGCGCTTGAAAGTCGCGGTGGTGATATGGCAGGACGTGAAGCATTACATGCCATGGCACTTGCTGCAGCGGCGCATGCTGCAGCGAATCGTATGTCCAACAGTCCGCCGGATGCAAATGGACACGCCGGCGCTGGCGGTGCGCCACGTACACCAAGTCCGGCAGCATTGCGTTATGCCAACACAACTATGGAGGCCGTTGCAGCGACAGAACAACATGAAAAACAGTCTGCGCTGGAACGTTTTACCATAAAACGTGAAGCCATGGAAACGCGTGAGGAGCgtgatgctgatgatgaagaCGACCAGGTTGAGGATTTATCAGTAACACGTAAGAAGCGTAAGCGTCCAGAGTCACCATATACACCACCACCAGCAACATTagcaccaccgccgccgccaccgcgtGCTGATACACCACCTGTGTCACACATGGAGTCGGAAGCCATTGCAGCTGGTGTAATAGTACCCAACAAACTAAACGCCGCAACACATGGTGATAACAATGGTGATTCTAGCGCAGCCGTAGATTTCGAACGTGAAATTACGAAACGTGAACTTATATCCGATGCCGACTGA
- Protein Sequence
- MGGPQPAPVAAPAVAPAGEGQTYCLRWNNHQTNLVQILHALHEVDSYVDCTLVADDEQFKAHRVVLAANSPYFQTILQDVPQDHCSIILPGVKSFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNQKTVEPHYSSSTPHTAYAAAATSSSTSSSAVESNTKNGAILNGNMDAYAAHNSSAVISTSTHNVSPNAAITSSSSPPYSGVSASGGVGAAATYQQPPYSSSSSGMYRSKSPVSAPTETPTNAGQNAAAERAAWPLSPSAAAAAAMLNSVYESAADMNPLKRKKLSAISSMFMNRDTPILRNVLANPADSSQPNPLLLPGVFKNDKQSSAEKQAAAAAAAAHGANNNHSFNGSDYGSEKYHDEPLSPHTDRSFDDEAGNNSSSGKKPEWKRYKQYTRNDMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNINTGRGTGRTPKRSPPGAVESSAAFPYHAHGYGQNEPLLSSMHEAREEREAKEHLHHQQQHQQRAEAAAAAVAAAAAAHHIPPNAIPHSTLLDHAFLQQALESRGGDMAGREALHAMALAAAAHAAANRMSNSPPDANGHAGAGGAPRTPSPAALRYANTTMEAVAATEQHEKQSALERFTIKREAMETREERDADDEDDQVEDLSVTRKKRKRPESPYTPPPATLAPPPPPPRADTPPVSHMESEAIAAGVIVPNKLNAATHGDNNGDSSAAVDFEREITKRELISDAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890213;
- 90% Identity
- iTF_00890213;
- 80% Identity
- iTF_00890213;