Lmac006048.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucophenga maculata
Gene Symbol
ttk
Assembly
GCA_035044805.1
Location
JAWNNP010001005.1:1024189-1029084[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 10 2.2e+04 -11.0 8.0 7 23 203 219 201 220 0.64
2 2 2.7e-19 6e-16 58.2 0.0 2 45 619 663 618 663 0.97

Sequence Information

Coding Sequence
atgtccGTACAGCAATTTTGTCTGCGGTGGAACAATCATCAGCCGAATTTCATATCGGTCTGCTCCTCGCTGCTACACAATGGCACTCTGGTGGATGTAACACTTGCCGCCGAAGGGAAACAATTGCAGGCGCATAAGATTGTTTTATCGGCGTGTAGTTCTTACTTTCAAacacTCTTTACAACGAATCCGTGTCAACATCCGATTGTTATACTTAAGGATGTACAGTATGATGATCTTAAGACCATGGTCGACTTTATGTACTATGGCGAGGTAAATGTATCGCAAGAGCAATTGCCACACATACTCAAAACGGCAGAGATGCTCAAAATCAAAGGTCTTGCCGAAATGCCCACCGATCCAGCCAATCTAACCAAATCCGATAGCAAATCATCAAATGAAGGCACGGAATTGGTTGGTGGCAGTCACGGGCAGAGCGCTGGCGGTGCTAGTGGTGCAGGAAGTGCTGGCGGTTTAGGCAGTAGTACTAGTGGCAGCGTAAGTGATTCGATTTGGGGTAGCACTGAATCGCAATTTCAGGCGCAACAACAGGCACAAgcgcaacatcatcatcagcaacaacaacagcaagcgcaacaggcagcagcagcagctgctgcacagcaacaacaacaattgcaacagcaacaagcagcggcagttgcagcagcacagcaacaacaacaagcgcaacaacagcagcaacaacaacaagcgcaacagcagcagcaacaacaacaacagcatcaccatcaccaccatcatcatcatcagcagcaacagcaaagcaGTAGTCAGACACAGACATCGGTAGCGCATCATCAACTGCGACGTACACCGTCGCCTTTGGGTGCGGGTACATCGCCGGCGACACGACGAAAGCGTTTGCGTAAATCCTCTAACAACGgTTCCGGCGATCGCAATAATTCAGAAGATCCGCATGGTTCATTAGATGCAGGCAATGCACCGGGCAGTCTTAGCCTATCACAAATGAGTCAAATGTCATTTGCCACCGGCGCAGGCACCACACTTGGCAGTCTTGCTGGACATACTCTACATACCGCCAAATTATTGAAGGAATCATCTAGCGCTGATTTGGATCAACATCCACAAGATTCGGATTTAGAAGATGGCCATggacatatacatatgcaaattAAACCCGAAGTTGATATCAGTGGCGTGAATCAATCGATACCATTGGACATTTCTGGTGCTACAACTCCATCTGAACACGATGCACCCAATTCACAGTCTTCGCATTCGGGTCTGCAATGGACGGTTGTTGATTCAAGTTATTCGCGCTTTTCATTGCCCGCCTGTCAGCCAAATTTGATTGGCAACGGGGCTGGTGGTGGTGCCGGTGGTAATGCAAGCGCAAACAATGCTGCGGaccaacgacaacaacagcagcagcagcaacaggaagCAGCGCAACATGCCAGTAGCCAacagcaccagcaacaacaacagcaacagcatttgCAACAACTACActatcaacaacagcagcaacagcaacaacaacaaagtgcagCGGGCGCCGCATACTCTTCACAGATAATCACTGTGAACAACCTAGTCAGCGGTTATACAACGGCAGCGCAAAATCTTTCGCCAACATCGCCCAACGAATCGAACATGGTGCAATCGGTATACAGCCAGGGACCATCACCGACACAATCGCCCATACATTCAGGCATGGGCGGTAGCAGTAGCGGGGCTGGTTCGGCTAGTGCTAGtattggtggtggtggcggcggtagCAATACGGTTGGTGGTGCAAATGGTGGTGGCGGCGCCAATGCAGCCGGACAGGTTGTAAAACGTAAACGTTCTGTAAATCCACAAGGTGATGAAAATTTTATACGTGCGCTTGAAGCTGTACGCTCCGGTGGCATTGGTTTCTGTAAGGCAGCACGTCTTTATGGTGTTAATAATCGTACACTTTGGCTGGAATACAAGAAACGCGGTTATCCCGTTTCACGACCAAGCATTAAAGCACGCATTGTGAAACAGGAACCGAATCTCTCACCATCGCCGACACCACCAAACAATGCCGGCGACGATGCAACCAATGAAAATTATGAACATTTAACAGCTGCTGCGGTAGCTGCAGCACAGACAGCAGCACTTAATATGCAAATACCGCCACAATCGGAAACGCCGACACCGACATCATTAATGTGTGCGCCACACCATGCATCAGCGGCggccgcagcagcagcggcaagtAGCGGTGCTGCAGGAGCACATCCCGCTATGGGCGTTATGAGTTTTCTTGATACGCGACACATGGACTTTCCGGCCGGGCTGCATACCATGACGCGGCAGCGTTATATCGATCCAACAGGCGCTGGTGCGGGTGCCGCGGGTACTGGTGCAGGCACAATTAACGTTAATCCGGCAGCTGCAATGAATCTACAAAGTATTAATTTTAACTCAATATAG
Protein Sequence
MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGKQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDPANLTKSDSKSSNEGTELVGGSHGQSAGGASGAGSAGGLGSSTSGSVSDSIWGSTESQFQAQQQAQAQHHHQQQQQQAQQAAAAAAAQQQQQLQQQQAAAVAAAQQQQQAQQQQQQQQAQQQQQQQQQHHHHHHHHHQQQQQSSSQTQTSVAHHQLRRTPSPLGAGTSPATRRKRLRKSSNNGSGDRNNSEDPHGSLDAGNAPGSLSLSQMSQMSFATGAGTTLGSLAGHTLHTAKLLKESSSADLDQHPQDSDLEDGHGHIHMQIKPEVDISGVNQSIPLDISGATTPSEHDAPNSQSSHSGLQWTVVDSSYSRFSLPACQPNLIGNGAGGGAGGNASANNAADQRQQQQQQQQEAAQHASSQQHQQQQQQQHLQQLHYQQQQQQQQQQSAAGAAYSSQIITVNNLVSGYTTAAQNLSPTSPNESNMVQSVYSQGPSPTQSPIHSGMGGSSSGAGSASASIGGGGGGSNTVGGANGGGGANAAGQVVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPVSRPSIKARIVKQEPNLSPSPTPPNNAGDDATNENYEHLTAAAVAAAQTAALNMQIPPQSETPTPTSLMCAPHHASAAAAAAAASSGAAGAHPAMGVMSFLDTRHMDFPAGLHTMTRQRYIDPTGAGAGAAGTGAGTINVNPAAAMNLQSINFNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01195356;
90% Identity
iTF_00890203; iTF_00890894; iTF_00891053;
80% Identity
iTF_00890203;