Basic Information

Gene Symbol
grh
Assembly
GCA_035044805.1
Location
JAWNNP010001173.1:1627479-1673732[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.15 1.6e+03 -1.6 0.6 8 51 468 509 461 558 0.52
2 2 9e-63 1e-58 198.6 0.4 24 221 974 1166 960 1168 0.93

Sequence Information

Coding Sequence
ATGTCCACATCAACAGCAGCCACCAGCGTCATAACGTCCAACGAACTGTCATCGCTAACATCGCACAGCGGCATGCATTCGCGCTTGAGTCATCTCAGCGATGCCTCACTGTCACCCACTGCGCACATAGTTGCCACCTCGGCAGCATCACTGGCGCCCAATGGTGTACCATTGATTACTTCACATGCCTTACACCGATCGCCGGACAGTCCACAGCCGGAATTGGCCACCATGACCAATGTGAACGTACTCGACTTGCATACGGATTCATCAAAACTCTACAGCGACAAAGAGGCTGTTTTCATCTATGAAACACCCAAAGTGGTTATGTCCAATGTGGATAatacacaacagcagcagcacacggAGCATATAATCGATGCACGCATTGCAGCGCAACTGAATGCACAACAACACAACACCGGCGGCaatggtggtggtggcggtggtggtaccattgctgctgctggacCACCGGATAATCAGCCACTTGCCAAAATCGAATTCGATGAGAATCAGATTATACGCGTAGTCGGACCCAATGGTGAGCAGCAGCAGATTATATCGCGGGAGATTATCAACGGCGAACATCACATATTGTCGCGCAATGAGGCTGGTGAGCACATACTGACACGCATTGTCAGCGATCCTACCAAGCTGATGCCCAACGATAATGCTGTCGCCACCGCAATGTACAATCAGGCACAGAAGCTATCGAATGAACATGGTGGTGCTGGCGGTGTCTATCAAACATCACCGTTGGATGCAACTGGTTTGCACTATGGCGATGGCGTTATTAAAACTGAAGCCGATCTCTATGAGGATCATAAGAAACAtgctgcggcagcagcagcggccgcCGCAGCAGGTGGTTCCATTATATATACCACGGCGGCAGATGCTGCAGAAGCGGCAAAACATTTGCCGCATTTAGCGGTGCCAGCAAAAATGGATCCAGACATCTATCAGACAGATAAACATATTGATTTGATCTATAATGATGGCAATAAGACGGTAATCTATTCGACAACAACGGATCAGAAGGGTTTGGAGATCTACTCAGGTGGAGATATAAGCGGTTTGGTTGCAGCAGATGGGCAGGTGGTTGTGCAAGCGGGATTGCCGTATGCGGGTACAAATGCAGCCGGCCAACCTGTGTATATTGTAGCGGATGGTGCGCTACCGCCCGGTGTGGAGGAACATTTACAgagGCGCAGTCCAGTTGGTGGTGTGGTCGGCGGTGGCGATATAGGAGGGGAGTCTGCTGTGCAGCCGGTtgaacatcagcaacaacatcatctgCAGAATGGCATAAGTATTCAAAATGCAACATATGCCAGTTCACCAGTTAATAATCTGCGTTATTTTGCTGAGCACGAGGCAAAATCAAATCAagaacaacatcaacatcaacacgaaacacttcatcatcatcatcatgaacagcagcaacaacaacaacaacaacatcacttATTAACAGCTGCATCTGTTGCTGTAGGGGATCCAGAGTCTGGTGTACACTACGAGTTGCAAACATTGCAGCACCCAGTTAGTTTAGAGAATGGTCACACCAATGGCGACAGCAGTTCCCCTGCAGCCTTTGTCTATAGCTATTACAGAAGCCCAATTGTTGAAAAACAGTGCAACGCACAACATGAAGAGGTCTATTGGAGCGCTGCGGCACCGAACAGTAAACTAAATGGACAGACCACACCTATTGATGTCTCTGCTCTATCACAGAATGAAATTCATGGTTTTCTGCTGGGCAACACCACAAACAGTGGGCATCATCCTGCCTCAACTGGTGCATCAGCAGTctctacaacaacaatatcacaACAATCCGCCATACTGCCAGCAGGTGTCGGCGTTGTGGTAACTGctgatcagcagcagcaacagcagcaacaacaacagcaacaaacagtGGCACAGCAGCTTATTAGCATCAAACGAGAGCCAGAAGACTTACGCAAGGATCccaaggcagcagcagcagcggcggcggcagcggcaaataataacaacaacaataataatagccATGGTCATGGACAGAAGGTTTTAGTCGTGGACTCAACGCCAACATTAGAAACTAGAACAGTAAAGTCAACCACTGCTAGTCCAGAAAGTGCATCCAGTGACACAATGTACGCTACAACCGGCGGCACACAGATTTATCTGCAGACCTCACATACCTCCTCcaacaatggcaacaatggCGTTGGCGGTGCACCACTACAGTCAAATCTCAGCGCACAATCACCGAGCCCGGGTCCGTACATCAATCCGGATGGCGGCTATGGCATGTACACAAATCGTCTGCCGCCTGGACCGCCGCCCACAGCATTTATTGCAGAGCCATATTATCGCGAATATTTTACACCCGATGGTCAGGGCGGCTACATTACATCGCGCACCATGTACGGCGATGCAGCCGATGCTGCGCCACAAACAAGCAGTTCAGGCTTAGCAGCTTACGAGGGACGTTTCACAACAAGCGCCAGCATTGGGCCACCGCCGCCACAGCCGCCGCATACAGTGTCCGGTACGCACAGCGCCAAGAATACGCCCATCTATGCAAAGGCAATAACCGCTGCCGGCTTAACAGTCGATCTGCCCAGTCCGGACTCCGGCATTGGCACGGATGCAATAACGCCGCGCGATCAGACCAGCATACAACAGTCCTTCGACTATGCCGAGCTGTGCGCGCCCGGTCCTGGCTCTTTGATCGACGCAAATGGCACCATTCCAATATCGGTTAATAATCTGCAACGCGGTTCGGTCAGCATACATGGCGGCCAGAACAGTCCGACAACATCGCTGGTCGATACAAGCACAAATGGCTCAACGCGTTCGCGGCCCTGGCACGATTTCGGCCGTCAAAACGATGCGGATAAAATACAAATACCAAAAATCTTCACAAATGTTGGCTTCAGATATAATCTGGAGAGTCCAATAAGCTCATCTCAACGCCGTGAAGACGATCGCATAACGTACATAAATAAAGGACAATTCTATGGCATTACTTTGGAGTATGTGCCCGATGCGGATAAACCCATAAAGAATACAACAGTAAAGAGTGTGATCATGCTGATGTTTCGTGAAGAAAAAAGTCCTGAAGACGAAATCAAAGCCTGGCAATTCTGGCATAGTCGTCAGCATTCAGTGAAACAAAGAATACTCGATGCGGACACCAAAAACTCTGTCGGTCTGGTTGGTTGCATCGAAGAGGTGTCACATAATGCAATCGCTGTCTATTGGAATCCGCTCGAAAGCTCTGCGAAGatcaaCATTGCCGTGCAATGTCTGAGCACTGATTTTAGCAGCCAGAAGGGTGTCAAGGGTTTGCCGCTACACGTTCAAATTGATACATTCGAGGAGCCCCGCGATGCAACAGTTTTTCATCGCGGCTACTGCCAGATAAAGGTCTTCTGCGATAAGGGTGCCGAGCGCAAAACGCGTGACGAAGAGCGACGCGCTGCCAAACGCAAAATGACTGCTACCGGCCGTAAAAAACTCGATGAACTCTATCATCCTGTAACAGATCGATCTGAATTCTATATTATGCAAGATCTTGCCAAGCCACCAGTGCTCTTTTCACCTGCCGACGATATAGAGAAGagCTTCTATGCACATGAGACTGATTCACCGGATTTGAAGGGTGCATCGCCATTCTTGCTGCAAGGTCAAAAGGTCGCTACACCAACGCTTAAATTTCATAATCACTTTCCGCCCGACATGCAGACCGACAAGAAGGATCATCTGCTGGAACAGAATTTAATGACTGCTCCGATGCCTGATTTTGGGCCACCACTGAAACGTGGTCGCATTACACCGCCTACGAGTGAACGTGTCATGTTGTATGTGCGGCAGGAGAACGAGGAAGTATATACGCCGCTGCATGTGGTGCCACCCACCACATTAGGTTTGCTAAATGCGattgaaaacaaatacaaaatctcGACAACGAGCATAAATAACATTTATCGCACGAACAAAAAGGGGATTACTGCGAAAATTGACGATGATATGATATCGTACTACTGCAACGAGGACATCTTTCTGCTCGAAGTGCAACAAATCGAAGATGATCTTTACGATATAACGCTGACGGAGCTGCCCAATCAATGA
Protein Sequence
MSTSTAATSVITSNELSSLTSHSGMHSRLSHLSDASLSPTAHIVATSAASLAPNGVPLITSHALHRSPDSPQPELATMTNVNVLDLHTDSSKLYSDKEAVFIYETPKVVMSNVDNTQQQQHTEHIIDARIAAQLNAQQHNTGGNGGGGGGGTIAAAGPPDNQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPTKLMPNDNAVATAMYNQAQKLSNEHGGAGGVYQTSPLDATGLHYGDGVIKTEADLYEDHKKHAAAAAAAAAAGGSIIYTTAADAAEAAKHLPHLAVPAKMDPDIYQTDKHIDLIYNDGNKTVIYSTTTDQKGLEIYSGGDISGLVAADGQVVVQAGLPYAGTNAAGQPVYIVADGALPPGVEEHLQRRSPVGGVVGGGDIGGESAVQPVEHQQQHHLQNGISIQNATYASSPVNNLRYFAEHEAKSNQEQHQHQHETLHHHHHEQQQQQQQQHHLLTAASVAVGDPESGVHYELQTLQHPVSLENGHTNGDSSSPAAFVYSYYRSPIVEKQCNAQHEEVYWSAAAPNSKLNGQTTPIDVSALSQNEIHGFLLGNTTNSGHHPASTGASAVSTTTISQQSAILPAGVGVVVTADQQQQQQQQQQQQTVAQQLISIKREPEDLRKDPKAAAAAAAAAANNNNNNNNSHGHGQKVLVVDSTPTLETRTVKSTTASPESASSDTMYATTGGTQIYLQTSHTSSNNGNNGVGGAPLQSNLSAQSPSPGPYINPDGGYGMYTNRLPPGPPPTAFIAEPYYREYFTPDGQGGYITSRTMYGDAADAAPQTSSSGLAAYEGRFTTSASIGPPPPQPPHTVSGTHSAKNTPIYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTSIQQSFDYAELCAPGPGSLIDANGTIPISVNNLQRGSVSIHGGQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVPDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEEPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYIMQDLAKPPVLFSPADDIEKSFYAHETDSPDLKGASPFLLQGQKVATPTLKFHNHFPPDMQTDKKDHLLEQNLMTAPMPDFGPPLKRGRITPPTSERVMLYVRQENEEVYTPLHVVPPTTLGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQIEDDLYDITLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-