Lsal020344.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucoma salicis
Gene Symbol
nfxl1
Assembly
GCA_948253155.1
Location
OX411827.1:1434538-1437006[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 3 3e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.022 2.2e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 18 4.6e-07 0.0047 17.7 15.9 3 19 186 202 185 202 0.95
4 18 7.9e-06 0.08 13.7 12.5 3 19 239 255 237 255 0.92
5 18 0.64 6.5e+03 -2.0 1.5 5 10 279 284 279 284 0.94
6 18 4.2e-08 0.00042 21.0 11.7 1 19 290 308 290 308 0.99
7 18 5.6e-05 0.57 11.0 18.2 3 19 345 361 337 361 0.87
8 18 3 3e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 18 7.1e-07 0.0072 17.1 16.3 1 18 395 412 395 413 0.97
10 18 4.8e-10 4.8e-06 27.2 13.9 1 19 422 440 422 440 0.99
11 18 0.00047 4.8 8.1 9.1 8 19 487 498 479 498 0.85
12 18 0.026 2.6e+02 2.5 11.7 1 12 508 518 508 518 0.96
13 18 0.53 5.3e+03 -1.7 3.3 14 18 547 551 547 552 0.85
14 18 0.31 3.1e+03 -0.9 0.4 8 12 568 572 567 579 0.79
15 18 1.4e-05 0.14 13.0 5.3 1 11 588 598 588 599 0.97
16 18 0.00045 4.6 8.1 14.9 1 18 628 645 628 646 0.84
17 18 1.9e-06 0.02 15.7 11.8 1 16 687 701 687 706 0.90
18 18 2.2 2.2e+04 -3.7 0.2 12 15 721 724 721 725 0.75

Sequence Information

Coding Sequence
ATGGCACGTAGATATAGAGACGCAGCCGCAAAATTGCAGCAAAATGTTCAAAAACATTTGAAGGAAATGAAAGACCTCTCATCTTCAGAAGACGAAGACCCTTATGAATCAAGTGTCCTCGATGGAGTGTTCCAGAGTTACTGGAGAGGTGGCGGAGACAAGTCTATGTTGAACAGGACTAAGAATCTTCTAGAAGAAGCTATCAGTGGTCGCGTAATAACGTGCCTTATATGTATAGGATCTATCAAAAGAATAGACGCTATATGGACTTGTGATCACTGCTTTTCTTATTTTCATTTATCGTGTATTCAAAAATGGGCAAACGATAGCATTTTCCTGTGCTCTGAAGAAAGCCAGGGACCTATAGCCGTAGTTAAACCTAAAAAAATTGAATGGTGCTGCCCAAAATGTCGCCAATCCTATTCTAAAGTAGAAATCCCGCGTAAGTACAGGTGCTTTTGTGGTAAAACTGATGACCCTCAGCACCATCCATGGCTGTTACCCCATACATGTGGTGAGGTCTGTGAAAAGAGATTGTCAATAGGTGATAACTGTAAACATAAATGTTTGTTGCTATGCCACCCTGGACCTTGTCCACCGTGCCCTCAGACTGTCAATGGAGTATGTTACTGTGAGAAGGAACGGAAAAAAGTGAGGTGTAGTTCTGCAAAATGGTCATGTGGTCAATTGTGTATGAAACCGCTACTATGTAAGACACACAAGTGCAAATTAATTTGCCATGGGGGTGAATGCTCACCCTGTAGTTATACCAGTGTTCAACCATGCCAGTGTGGATCTGAAAAAGCTAAGAGACCCTGCAATGACCCATTTTGGAAATGCAAAAGAGTTTGTAATAAATTATTCTCTTGCGGCTACCATAGATGTGATAATACCTGTCATTTGGGTGAATGTGGTGCTTGTCCTAACTCCGGTATGAGATCCTGCCCATGTGGTGCTAATCAAAGGTTTGTCCAATGCCCAGATGTTATAGAAACCTGCTTAGGTACTTGTGGTAAAAAACATGATGATTGTGATCATCTGTGCCCTGAGAAATGCCACAAAGGACAGTGCCCACCTTGTCAGGTTTTAATACAAAAAAAATGCCAATGCTCAACACATACAAGATCTCTGCCATGCAGCAAAGAATTTAAGTGTGAAACTAAATGTAGAGGAACCAGGCCTTGTGGTAAACATGCATGTGCCCGAAAATGTTGCAACGGTAACTGTCCACCATGTGAAAAAATATGTGATAAACCTCTTCAGTGCGGTAGACATAAATGCACAAGTATATGTCACCGTGGGCCTTGCTATCCATGTCCGAGGGAATCTAAAGTTACTTGTCGATGCAAAGAAACATTTATTACAGTTCCATGTGGCAGGGAAAGGCATGTAAAACCTCCAAAATGCATTCTGACATGTAAAATTAAATACAAATGTGGTCATACTGAAGAAAACAAACATGTTTGTCATTTTGGGGATTGTCCACCGTGTAAAGCAATCTGCGATAAGGCATATCCCAAGTGTGGTCATCACTGTGAAGCAACATGTCACGAATATGTGGCTGTCGTCTTTAAACAAGTTGAAAAACCTGCAACACCATGGGAAGTGCAGCCTCCAAAAACTAAGATAATGACGTTAGAATGTCCTCCTTGTAATATACCCATTCCTATTATCTGTTTTGGAGAACATGAGACTGATGACCAGCCTTGCCATTCTGCTGCTCGTAGACCTTGTGGAAGGGAGTGTGGCCGTCCACTTGCATGTGGCAATCACAAATGTACATTGCTTTGCCATCTCTTCACTCCAATTCCTGAGTATCCAAATGTACCTTCTTCATGTAGACAATGTAACGCAGAATGTTCATTTCCACGACCAGAAAAATGCTCTCATAAGTGTCCGAAACGTGCTTGTCATCCTGGTATGTGTCCTCCATGTGAAATACTAGAGAGATTGTCTTGCCACTGTGCTGTAACTGAGATATATTTACGCTGCCGTGAAATATCAGTTGCTACTGAAGAAATGTTATCTTGCAAGCAACAATGTCCTAAGAATTTAGAATGTGGTCACCGTTGTCGTAATATCTGCCATTCTGGGCCTTGTGGCAACCAAATTTGCACTAAGAAGACTAAAATACATTGCCCGTGTGGCAATATCAAAAGGGAAGGTCCGTGCAATGCTGTCCGTAGCGGTGAAATTGAACTACTTTGTGATGAAGCTTGTGAGGCCAAGAAAAAGGCAGCTAAGTTACAGAACGAGAAGGAAAAAGAGAGATTGAAAGTTTTGGAGGAGGAGAAGAATAGAAAAGAATTAGCAGAATACGAGTGGAAGTTGAGTGGTAAAAAGAAAAAATATAAGGAAAGGAAAATAGTTGTTTACAAAGATGATAGACCATTTGTGCAAAAGTATTGGATTCCAATATTGTCAGTACTTGTAGGTGTCACAGCGGCAATTTATATTATTTATTCGTAA
Protein Sequence
MARRYRDAAAKLQQNVQKHLKEMKDLSSSEDEDPYESSVLDGVFQSYWRGGGDKSMLNRTKNLLEEAISGRVITCLICIGSIKRIDAIWTCDHCFSYFHLSCIQKWANDSIFLCSEESQGPIAVVKPKKIEWCCPKCRQSYSKVEIPRKYRCFCGKTDDPQHHPWLLPHTCGEVCEKRLSIGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCEKERKKVRCSSAKWSCGQLCMKPLLCKTHKCKLICHGGECSPCSYTSVQPCQCGSEKAKRPCNDPFWKCKRVCNKLFSCGYHRCDNTCHLGECGACPNSGMRSCPCGANQRFVQCPDVIETCLGTCGKKHDDCDHLCPEKCHKGQCPPCQVLIQKKCQCSTHTRSLPCSKEFKCETKCRGTRPCGKHACARKCCNGNCPPCEKICDKPLQCGRHKCTSICHRGPCYPCPRESKVTCRCKETFITVPCGRERHVKPPKCILTCKIKYKCGHTEENKHVCHFGDCPPCKAICDKAYPKCGHHCEATCHEYVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCNIPIPIICFGEHETDDQPCHSAARRPCGRECGRPLACGNHKCTLLCHLFTPIPEYPNVPSSCRQCNAECSFPRPEKCSHKCPKRACHPGMCPPCEILERLSCHCAVTEIYLRCREISVATEEMLSCKQQCPKNLECGHRCRNICHSGPCGNQICTKKTKIHCPCGNIKREGPCNAVRSGEIELLCDEACEAKKKAAKLQNEKEKERLKVLEEEKNRKELAEYEWKLSGKKKKYKERKIVVYKDDRPFVQKYWIPILSVLVGVTAAIYIIYS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00932106;
90% Identity
-
80% Identity
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