Lsal005368.1
Basic Information
- Insect
- Leucoma salicis
- Gene Symbol
- GATA-B
- Assembly
- GCA_948253155.1
- Location
- OX411805.1:247524-269250[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-17 2.4e-13 50.1 3.2 1 34 150 182 150 184 0.97 2 2 1.8e-18 6.7e-15 55.1 7.6 1 34 203 235 203 237 0.97
Sequence Information
- Coding Sequence
- ATGTGTGACAGCGGAGGCGGAGGCGGGAGCGGAGACGGCGCGGTGTACGCGCGTTGTGCGTACTCGAGCGCTGGCGGGTCGCCGTACTTCGGCAACGGCGCGGATATGTCCGCTCCGCCGCAAATATGGAGTTCCAGTGCAGTGTGCGAGGCCGGCGGGTCGCCGAGCTACGGTGGCTCGAGCGGGTCGGGCGGCGTGGTGATGGAGGAGTACGCGGAGGCGGGCGCGGGAGCGAGCGCGGAGGGCGGCTCGCTGCCCGCCTTTAGCGCGCGCTTCGGCGGCGCCTTCGCCTGCGCGCCCCCGCGGCCCCCCGCCTACCCACCCGCGCTCCCCGCCTTCGCGCCGCAGGACGTGTGGCACGTGGAGAGCAATCGACGGCCGCAGATCTCGGCCGCTGCCAGCCTCACAGCCATGGAGGTGGCGGAGTTGTTCACGGAGGGCCGCGAGTGCGTCAACTGCGGCGCCGTGCACACGCCGCTGTGGCGCCGCGACGGCACGGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACCAAGATGAACGGCATCAACCGGCCGCTCAAGCAGCCGCGGCGGCTGATGGGCGCCAAGCGGCCGGGCATGGCGTGCACCAACTGCCAGACCACGACCACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTCTGCAACGCGTGCGGCCTGTACTACAAGCTGCACAACATCAACCGCCCGCTCGCCATGAAGAAGGACTCCATACAGACGCGGAAACGGAAACCTAAAGACAGGATCAAGACGGAGAGAAATCTTAAGAGCGCTGTGCAGCGAACTATGAACTCTGTCGGCAAGGACAACCTGAGTGAGTATCACTTGGAGCCGAGCGGGCCGGGCCGCTCCCCGCTGGCGCTGAGCTACTACGTGCAGCAGCACGCGCTCAAGCTGGAGGAGCCGCCGCCCGCGCACGCGCCCGCCCCCGCGCCCGCGCCCGCGCACGCGCACGCGCACGCGCACGCGCACGCTCACTCGCACGCGCACGCGCTCGCGCACGCCTACGACGACGCGGAGCGCCTCGAGCGTCCCACCGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MCDSGGGGGSGDGAVYARCAYSSAGGSPYFGNGADMSAPPQIWSSSAVCEAGGSPSYGGSSGSGGVVMEEYAEAGAGASAEGGSLPAFSARFGGAFACAPPRPPAYPPALPAFAPQDVWHVESNRRPQISAAASLTAMEVAELFTEGRECVNCGAVHTPLWRRDGTGHYLCNACGLYTKMNGINRPLKQPRRLMGAKRPGMACTNCQTTTTSLWRRNAHGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKDRIKTERNLKSAVQRTMNSVGKDNLSEYHLEPSGPGRSPLALSYYVQQHALKLEEPPPAHAPAPAPAPAHAHAHAHAHAHSHAHALAHAYDDAERLERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -