Lsal016495.3
Basic Information
- Insect
- Leucoma salicis
- Gene Symbol
- Znf711
- Assembly
- GCA_948253155.1
- Location
- OX411826.1:15552309-15573099[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.019 1.8 9.9 1.5 1 23 13 35 13 35 0.99 2 23 0.17 16 6.9 1.6 2 23 40 61 39 62 0.91 3 23 0.045 4.2 8.7 2.3 1 23 73 95 73 95 0.97 4 23 0.0035 0.32 12.2 1.0 2 23 100 122 100 122 0.96 5 23 0.0055 0.51 11.6 0.0 1 23 129 152 129 152 0.95 6 23 0.29 27 6.2 0.2 3 23 161 181 160 181 0.96 7 23 0.28 26 6.2 0.8 3 23 202 222 197 222 0.87 8 23 0.28 26 6.2 0.8 3 23 243 263 238 263 0.87 9 23 0.28 26 6.2 0.8 3 23 284 304 279 304 0.87 10 23 0.28 26 6.2 0.8 3 23 325 345 320 345 0.87 11 23 0.28 26 6.2 0.8 3 23 366 386 361 386 0.87 12 23 0.28 26 6.2 0.8 3 23 407 427 402 427 0.87 13 23 0.28 26 6.2 0.8 3 23 448 468 443 468 0.87 14 23 0.28 26 6.2 0.8 3 23 489 509 484 509 0.87 15 23 0.28 26 6.2 0.8 3 23 530 550 525 550 0.87 16 23 0.28 26 6.2 0.8 3 23 571 591 566 591 0.87 17 23 0.28 26 6.2 0.8 3 23 612 632 607 632 0.87 18 23 0.28 26 6.2 0.8 3 23 653 673 648 673 0.87 19 23 0.28 26 6.2 0.8 3 23 694 714 689 714 0.87 20 23 0.00033 0.031 15.5 0.1 1 23 2653 2676 2653 2676 0.95 21 23 0.044 4.1 8.8 2.2 1 23 2682 2705 2682 2705 0.95 22 23 0.0012 0.11 13.7 2.2 3 23 2716 2736 2715 2736 0.98 23 23 0.0055 0.51 11.6 3.0 2 23 2743 2765 2742 2765 0.95
Sequence Information
- Coding Sequence
- ATGATTAAATATTCTATATTCCAGACTAAAAATAGTTACCAATGTGACATCTGCAAGTCTGTATTGAACACGAAGAATTCATATAATGTACACACAAAAAGGCACATGCGAAGATTGGAATGCATGGAGTGTGGTAAAAGATATACTCACGAGCAGTCGGCTATCCAGCACTACGATGAACACCATCTACCACCTGGATCCTCTTTACAGCGCGGGTATTCCTGCAAGGAGTGTGGTTTCACAACTACCGTAAACCGCACGTACCGCTATCATCTCGACAAACACAAGAAAAAGCGTGAGTGTTCACTCTGCGGGAACACCTTCGTCAACGACAGTAGTCTCAAAATGCACTTGCACACGGTACACCGGCAGTCGGCGCGCGCGTACCGCTGCGAGGCGTGCGACAAGACGTACCGCGCCAAGTCGGGGCTGGCGGCGCACGCGGCACGGGCGCACGGCGCCTCGGCCGAGCGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTACGCCTCGCGCGCGGCGCTGCGTGCGCACCTCGCCTCGCACTCGCGACACGTGAGCGACGCCGACAGGAGGTATGTCACATTACTGTACAAGTGCGCCTACTGCGCCCTCTGCCGCGCGCACTTTCAGACATGCCGAGTGAGCGAGCCGGAGCGAGCGAGACAGTGCGGGGAAGCGGGAGGGTTGACACTCGGCCTAGTAAGAAGAACGGGAGCCGAGCTACTGTCGTTGCCGCTTCGTTCGGCTGAGCACTCGGTGCTATGTTTATTACGTACCGAGTACTCGGTCGAAACTACATACTGTCTCGCCCCTTTGATCGGTAGAGGGGAGTACAGCATAACACTCGATGCTTACAAAACTACTAAAGCTTTTTTAACGGAACAGTACCAACTGCTTATGAAAAAACAATCAGGTGAATCTTCTAAACCTATAGAGAGGTTTTCAAATACTCAACAACAGCAGGATTTAGAGCCTGAGAAACAAGCCCAGTCTAGGTTAAGGTTGGTAGaaatactgctcgctactgcaatgatcaaggttcaatccagcaacggaaaatatcataaaatgcgagcactcatagaccagggttctcaagtttcccttataacagaaaaggcgatacaaaatttagcattgtcaaaacagccctggaagggaattgtgtcaggtatcggagccaaggaaagtagatgcaaaggtgtcacgcaaatatcctgctcatcatctcataataactactctttcaagacagaagtatacattatgaatactttaatcaataatttacccagtcaaacatttgaaaagcctacatggtcacacttggagggcatacaactagcagatcccgactttaacattagccgtcccgtagatatattgttaggcgcagatgtatattcacacatcataatggacggcctcagtagatcgcaccagtcaatgcccgttgcacaacaaacgcgtttaggttggatcttatgtggaaacgtgccaaccctgcactgtaacgtagttcaaaattatatccgagagattgaacaattttggaaaatcgaggacatctccgaggtacctaaattatcagaggacgatgaaaggtgtgtagaatactacaaatctaccacaaaaagacgaacagatggttcgtatgaggtcagaatcccgttcaaaaataatttacaaaatcagttaggccattcgaaacataccgctattgcacagtttcgtcatatagaacaaagatttcagcgtaataaagaaatagaacaacaatataaattatttattaatgattatctatcaatgggacacatgaaaccgtcaatgagtaatcagaaaccagagtgttatttacctcaccactgtgtactgcgaaatgagtcaaccactacaaaacttcgtgtcgtttttaatgcgtcacaaaagacaacaacgggatgcagcctgaatgatctcatgttcaaaggcccaaacttacaacaagatcttcaatctttactcatgagatggagacagttcccttatgcattcacagcagacattgagaagatgtttcgttacatttgggttaacgaacaagatcaaaagcttcaaaaaataatatggcgtaactcagtcgacatggctttaaaagaatatcaactgtgcacagtcacatacggcaccaaggccgcaccgtttttggctatgatgacattgaggcagttagcagaagatgagagacctaactacccagaggcggcaaaagtcctcgagcattccttttacatggatgacgcagtccatggtgcaaattctgttgaggcagcagtaaaactacaaaaagatttgataaagctattgaaatcaggtggatttaaccttcgtaaatggaaatcaaattgcccagaactacttcaaaacaacacatcacatggcattcaagaagattttgattttaaacatacggaatcacgaaatacattgggtcttcggtggaatccgaaacaggacctatttacattcaaatctcaaatagacttcacgcttaaaaagccaactaaaaggacaatgttatcagacatatcaaagttatatgatcccttaggctggctctccccagtctcaactagacttaagctgttgtttcaaaaggtatggatgtcaagtatccaatgggatgaccagctatcccatgaactcgtcaaggagtggaagaatgtcaaagatgacatgtctttaattaaacaaatacagttaccacgttggctgggcacatcagaaaactgtaagacaatagaattgcatggcttttgtgactcttcaaataaagcctatgcgtgtgttatttactcaagggtacagaacaggggccacgttagcatatcgctagtagcaggaaaaacgagactagtccctgcgagcaaatcagtatccctcccgagattggaactctgtggcgctcttcttttaagcaagttaatggccaaggtccgggatggtctcagcaactacaacattcaaatatatggctgggtggattcgatggtagttctcgcatggctccaaggtgacgtggggcggtggaaacccttcgtcgctaatagagtaagacaaatctgtgaaataatgccccccaataactggcgttacgtcaagtcagcagagaatccagctgactgcgccagccgcggtctcagtgtggaaagactgaaggagcactccctatggtggcaggggccattatggttacctggctacacaaataaacacgaaaatacattaaaacatttcacaacagacgaagaagctaaaggaataataaacgtcaataacatcatacagcagacatgcaaaacaagcattattgacgagctattatcaaagcacagctccctacaaaaattaacaagagtttttgcatgggtgttaagatttataAAAtggatcataggaggtaatagagcagttaaaaagcgactacattcctgtgtaacttgtcgtaagcacaaccctattaaaatgaagcagttaatgggtgacttaccttctcaaagatgcaacgtcgcaaaacccttttttcataccggagtcgattttacgggacacgtgatgatcaaagccaacaagggccgtggtattaaaactacaaaggggtatattgccgtcttcgtctgcatggtgacgaaactcgttcatctagagcttgtgtctgacctgacatcgtcggcctttctagcagcattaagaaggatggcagcgagaaaaggaaccccgcatcatatctattgcgataacggcactaactttgtaggcgccagtaaaattctgacagaagaattaaataaaatattaagcacattcaatggagatttaatcaatgaaataaccaatttagaaatcgtgtggcatttcaatgcaccttcatggccttcggcaggtgggttatgggaggcggcagttaaaagcgtcaaataccacttacatagggttattggtgagcaacgattaacatttgaagaatattacactatcttagcgcaagtagaagccgtactcaattcaagacccttatgtccactgtctgaagatagtgatgacttagaatttctaaccccatcaagctttataaatataaaccaagacatgagtatcttggagacggagacagatatgcgtacaaggtggtatcttactcaaaagatcgtccaggatgtgtggaaacgctggcattcggagtaccttagccaattaacgacaagaagtaaatggcgaaataaacgaactaacataaaaatcaacgatgtggtgacgattgatgacgcacaccttcccccaggcaagtgggcaataggccgcgttattgacctacaccctggcagtgatggcaacgtcagggtagtcacgttgaaaacaaagactggacttatcaggcgtcccatcactaagttatcGCCACTTCCTGTATATAGTGAAGAAAATCTTCAAGTTTCAAACAAAACAAGTCCAAAGACTCAAAAACATGGGTTCCTTTCTTTGGCAACTTTACTATTATTTTTCATGAGCATTATTACATCATGCCAGTGCTCatataacgtgactcgaataaaagacaatcagggactttattttgataaatttgccgatatgagattaataagagacaattggaaaatagtctcatattatgacatggagccatattggcaaggaagaacagcgtgcaacaaatacataaaatatttagatcaactatgtagtaagattacaggagaatcccattgtgacgtattagtaatgcaattgcagctcgagttcgcggaattagaacacaatgaccacctgttgcttaatcagcattgggacacgcgccgtaataagcgccggcgcagaggtttaattaacggtgtcggatatcttgccaatagcctatttggtgtactcgacgacaaattcgctgaacagtataaacaagacatacaattaacaagaaacaatgaaaattatttggctttacttattaaaaatcaaacatcgataatagaggtagagtataatattttgaaaagaacagaagactctttccttaagcagcacaagatgcttaaccagctatctaacaaattaggcaatttcgagaactctttgaaaactgaaactgaaagaaatctcctgtacaatgaactaagtctaggcgccacagctgcaagtaatttattacgacagttaaaagctatacaaagtaccattctagataccttgacagacgtttaccatggcagatttaatttccatttggtttctccagggcagcttaaggaaaccctgagttccatatcaaatcacctcacaaaggatctctcattaccagttaataatctacaaaccgagttcactaaaatctatcacttattgaaagttaaagcaaacatgtgcaaggaatatttaatttttgaaTTAACACTTCCGTTAATTACTCGAGACTCGTTTGAAATAATGAAAGTATTATCACTTCCCCGAGCTCTCAACAATCACCAGATGGCCAGGATAATGCCGATTTCAGAGTATGTGGCTATTAACCTAAGAAAGGAAGCCTATCTAACAATGACTGCTCTTGACATCAATGCATGTGAACAGGACGGAGCGGATGTGTACCTGTGCTATGTACCAAGACCTATTCATCATCTTCAAAGTGATGAAAACTTATGTCAGCTTGATCAGAACTCAGGCAAGTGTAAGTTAAGCATAACTATATGCAAAAATGAGTGGATGGAAATAAATAAAATAAACTACTATCTATATTTCTGTTGTGGAGCATGCCACATTCGCGTGTTATGTGACAATCACGCGTTGGCGGGGATAATACACGGATCAGGAATTCTTGGCATCGAACAAGGATGCATAATAAAAACCGACAATATTACCATTTATTCACACAGCGAAGGGTTAACTAACTTAAACATTAAAAGGAAGTTATACTTACCAGAACTAGAACCAATCAACCACGTCATCAATATCAGCATACCCGACTCAATAAATCAGAACTTTTCAGTACTTACTCGGGACAATCAATTAGATGAGCTAAAGAAACAAATAGAGAACCTCAAAAACAATGAATCTCTACCAGTGTCCTACCATGACATACATCACTACAGTGCAATTTATGGTATTCTCGGAATCATAATACTTGTCGGAGCAATTCTCATGGTGCGACGAATTCGTAGGAAGCCCACTGAATCTTCAGTGGTGGCAAGCGTCGGCCAAGTGACGTCTCCGCCTGACAGACACACCAACGAACAGCCAACAGATCAGCCATCAAGTGCAAACGCAAACATTAATAGTGTCAGTGCATCTACATCTAGTAAAATTAAGTTTATTTGCGACGAATGTGGTGCCAAATTCATCAAGAAAAACAGCTTACAAATACACATCAACTGGGAACATCTCAAACTTAACACGCATCGATGTGTCAAGTGCCCAAAAGTATTCAAATGTGCTCCAGCTCTGCGAAGACACGTGAACTATGTTCACAACAAACTCCGTCCGCCGCGAAATAAAATATGTCACTTCTGTGGACGAGGATTTACTACGCAGAATATTCTGCAGTCGCACCTTCGTACCCACACTGGTGAACGTCCGCTGCAGTGTCAACATTGTCGTGCCACGTTCGCTCACTCCGGGGCGCTCTACACACATATGAAACTTAAACATAGTGCTGTTAAATGA
- Protein Sequence
- MIKYSIFQTKNSYQCDICKSVLNTKNSYNVHTKRHMRRLECMECGKRYTHEQSAIQHYDEHHLPPGSSLQRGYSCKECGFTTTVNRTYRYHLDKHKKKRECSLCGNTFVNDSSLKMHLHTVHRQSARAYRCEACDKTYRAKSGLAAHAARAHGASAERAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHYASRAALRAHLASHSRHVSDADRRYVTLLYKCAYCALCRAHFQTCRVSEPERARQCGEAGGLTLGLVRRTGAELLSLPLRSAEHSVLCLLRTEYSVETTYCLAPLIGRGEYSITLDAYKTTKAFLTEQYQLLMKKQSGESSKPIERFSNTQQQQDLEPEKQAQSRLRLVEILLATAMIKVQSSNGKYHKMRALIDQGSQVSLITEKAIQNLALSKQPWKGIVSGIGAKESRCKGVTQISCSSSHNNYSFKTEVYIMNTLINNLPSQTFEKPTWSHLEGIQLADPDFNISRPVDILLGADVYSHIIMDGLSRSHQSMPVAQQTRLGWILCGNVPTLHCNVVQNYIREIEQFWKIEDISEVPKLSEDDERCVEYYKSTTKRRTDGSYEVRIPFKNNLQNQLGHSKHTAIAQFRHIEQRFQRNKEIEQQYKLFINDYLSMGHMKPSMSNQKPECYLPHHCVLRNESTTTKLRVVFNASQKTTTGCSLNDLMFKGPNLQQDLQSLLMRWRQFPYAFTADIEKMFRYIWVNEQDQKLQKIIWRNSVDMALKEYQLCTVTYGTKAAPFLAMMTLRQLAEDERPNYPEAAKVLEHSFYMDDAVHGANSVEAAVKLQKDLIKLLKSGGFNLRKWKSNCPELLQNNTSHGIQEDFDFKHTESRNTLGLRWNPKQDLFTFKSQIDFTLKKPTKRTMLSDISKLYDPLGWLSPVSTRLKLLFQKVWMSSIQWDDQLSHELVKEWKNVKDDMSLIKQIQLPRWLGTSENCKTIELHGFCDSSNKAYACVIYSRVQNRGHVSISLVAGKTRLVPASKSVSLPRLELCGALLLSKLMAKVRDGLSNYNIQIYGWVDSMVVLAWLQGDVGRWKPFVANRVRQICEIMPPNNWRYVKSAENPADCASRGLSVERLKEHSLWWQGPLWLPGYTNKHENTLKHFTTDEEAKGIINVNNIIQQTCKTSIIDELLSKHSSLQKLTRVFAWVLRFIKWIIGGNRAVKKRLHSCVTCRKHNPIKMKQLMGDLPSQRCNVAKPFFHTGVDFTGHVMIKANKGRGIKTTKGYIAVFVCMVTKLVHLELVSDLTSSAFLAALRRMAARKGTPHHIYCDNGTNFVGASKILTEELNKILSTFNGDLINEITNLEIVWHFNAPSWPSAGGLWEAAVKSVKYHLHRVIGEQRLTFEEYYTILAQVEAVLNSRPLCPLSEDSDDLEFLTPSSFININQDMSILETETDMRTRWYLTQKIVQDVWKRWHSEYLSQLTTRSKWRNKRTNIKINDVVTIDDAHLPPGKWAIGRVIDLHPGSDGNVRVVTLKTKTGLIRRPITKLSPLPVYSEENLQVSNKTSPKTQKHGFLSLATLLLFFMSIITSCQCSYNVTRIKDNQGLYFDKFADMRLIRDNWKIVSYYDMEPYWQGRTACNKYIKYLDQLCSKITGESHCDVLVMQLQLEFAELEHNDHLLLNQHWDTRRNKRRRRGLINGVGYLANSLFGVLDDKFAEQYKQDIQLTRNNENYLALLIKNQTSIIEVEYNILKRTEDSFLKQHKMLNQLSNKLGNFENSLKTETERNLLYNELSLGATAASNLLRQLKAIQSTILDTLTDVYHGRFNFHLVSPGQLKETLSSISNHLTKDLSLPVNNLQTEFTKIYHLLKVKANMCKEYLIFELTLPLITRDSFEIMKVLSLPRALNNHQMARIMPISEYVAINLRKEAYLTMTALDINACEQDGADVYLCYVPRPIHHLQSDENLCQLDQNSGKCKLSITICKNEWMEINKINYYLYFCCGACHIRVLCDNHALAGIIHGSGILGIEQGCIIKTDNITIYSHSEGLTNLNIKRKLYLPELEPINHVINISIPDSINQNFSVLTRDNQLDELKKQIENLKNNESLPVSYHDIHHYSAIYGILGIIILVGAILMVRRIRRKPTESSVVASVGQVTSPPDRHTNEQPTDQPSSANANINSVSASTSSKIKFICDECGAKFIKKNSLQIHINWEHLKLNTHRCVKCPKVFKCAPALRRHVNYVHNKLRPPRNKICHFCGRGFTTQNILQSHLRTHTGERPLQCQHCRATFAHSGALYTHMKLKHSAVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -