Basic Information

Insect: Leucoma salicis
Gene Symbol: Zfa
Assembly: GCA_948253155.1
Location: OX411826.1:15605792-15628493[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.016 1.5 10.2 2.4 1 23 308 331 308 331 0.98

2 11 0.0039 0.36 12.1 0.1 1 23 338 360 338 360 0.98

3 11 0.37 35 5.9 4.9 1 23 364 387 364 387 0.93

4 11 0.15 14 7.1 1.2 1 23 394 416 394 416 0.80

5 11 6.4e-06 0.0006 20.8 0.5 2 23 421 443 420 443 0.96

6 11 3.4e-05 0.0032 18.6 1.2 1 23 449 471 449 471 0.97

7 11 4.3 4e+02 2.5 3.5 2 21 483 502 483 507 0.93

8 11 7.9e-05 0.0074 17.4 4.4 1 23 515 538 515 538 0.94

9 11 3.5e-05 0.0033 18.5 0.2 1 23 543 566 543 566 0.98

10 11 4.3e-06 0.0004 21.4 3.3 2 23 574 595 573 595 0.97

11 11 2.5e-06 0.00024 22.1 1.6 1 23 601 624 601 624 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.016	1.5	10.2	2.4	1	23	308	331	308	331	0.98
2	11	0.0039	0.36	12.1	0.1	1	23	338	360	338	360	0.98
3	11	0.37	35	5.9	4.9	1	23	364	387	364	387	0.93
4	11	0.15	14	7.1	1.2	1	23	394	416	394	416	0.80
5	11	6.4e-06	0.0006	20.8	0.5	2	23	421	443	420	443	0.96
6	11	3.4e-05	0.0032	18.6	1.2	1	23	449	471	449	471	0.97
7	11	4.3	4e+02	2.5	3.5	2	21	483	502	483	507	0.93
8	11	7.9e-05	0.0074	17.4	4.4	1	23	515	538	515	538	0.94
9	11	3.5e-05	0.0033	18.5	0.2	1	23	543	566	543	566	0.98
10	11	4.3e-06	0.0004	21.4	3.3	2	23	574	595	573	595	0.97
11	11	2.5e-06	0.00024	22.1	1.6	1	23	601	624	601	624	0.96

Sequence Information

Coding Sequence: ATGTTTCAGTTAAATAAAGTGCAGCCCTTAGATACTCTAATGGTCTGCTGGGAATGTAAAGCTTTACTCAACAAATGCTGGAAATTCAGAGAACAAGTTAAAGACTCCTATAGAATATTGCAAACATATACTAAAGAGAATTTCTATGAGTGCCTTAACAGTTTAGGCATAACTCCTTCTTTGAAAGTTCACTACACTGAAACTATCAACATCCCAGCTGCTGACCCAGACGACCAATCAATAACATCCATAGCTCAAGTTAAAATTGAGAGTGTCACTTGGGAAAGTGTCAAAGACGAAAGATCAAATCCTAAAGAAGAAAACAATGAGAGTAGCAAAGAGTTGGAGTCAGAGCTGCAACACATAATATCTTCTATAGAAAAAAGAGAAGAGAAGAGAAATAGAACCACCAAAAGTAAAACTAAGAAGAGTAAAAAGATTTTGAAGAGTAAAGAGAAGCACGACCATAATGACGAACGCACCAGCGCTGAGTCACTCAAACTTATGAACGATAAAGAATCATATAATATCCTTGTGGAAAGCAGGATTGAGGCGCCTGAAGTAGATGGTGAAGTTAACAGTTTTTCTGAAGCTTGGGAGTTCAGTAAAGTTGAAACCCCAAGTCCTAGATGTGATGATGAAGTCTCCGATACCTCAGTAAATGAAACATCAAACAGTGCAAATGAATGGGACATAGAACTCAAGAGTAGAATTTCTCCCATAGAAAAATGTCGCAGGGGAAATGACAACACCAAGAGAGCAGTCAATGGGAAATCTAAGAAGATTGTTAAGAGCATAAAACCTAAAACTATGAAACTACAAAAAGATATGAAGAAGATATTAACAGTAGCGTTGACATACGAGGAGATGTTGTTAGAGAGAGAGATAGAGTCAAAAAAAGAATCATTCGTGAAAGCCGAGTACAAATGCAACACGTGTCTACTAGGCTTTATGCAAAAGAAATCATATCAGATGCATTTGAATTCAAAACACTCGTCGGATTTGGGAGAATACATATGTCCGATATGCGAAACTATAATATCATCTGTGGACTCTTTCACCGCACACTACAAACGTCACATGCGAAGGTACGAATGCAGTATATGTCACAAACGGACGACGGACCTCAAAGTTATGCATCAACATTATTACTCGACGCACGAGATCTCGCTCAAACAGTACGTGTGTAACGTGTGTGGCAAAGTATCGAGTTCCATAGACACCCATCGTTATCACAAAGATAGTCATAAAGCTAGAGTTCAATGTCCTGATTGTGAAAAGACATTTAGACATAGAGCTGGACTCATGAACCATAGACTCGTAGTCCACGAGTCACAAAACGCGTTCCCGTGCAACGTGTGCAACAAAGTATTCAGATGGAAGACGAGTTTGAAGAGGCACCTCGAGAAACATGACTCTAAGGAGGAGAGTAACCCGAGCGCCCCGCGGTGCTTTCTGTGTCGCATCAACTTCGCGTCAGTGTGCTCGTACCAGCGACACTTGAAGAACAGTCGTAAACATGTCACACAAGATCAACTCAAGTACGTGTGCGACCACTGTGACCGTCGGTTTTGCGACAAGACGAAACTTCGAGACCATATTGAGGAAAAACATCTCCACACCTCATACCAATGTGATATATGTTCTAAGCCGTACAAAAACCGTGTTGGGTTGGACCAACACATTCGAAACGTCCACAAGGGGAGGCCCAAGAATAAAATGTGTCACCATTGTGGCAGGGGTTTTCCCACCAACATGCAGTTAGAGTCGCACATAAGGACCCACACGGGCGAGAAACCGTTCATTTGCGAGTTCTGTCCGACCACGTTCTCTCAGCAGAGCAATCTTTACAAACACTACAGACAGGTTCACCTAATAAAGTCTAAACCCTACCCAATACTTAAGAAAAAGAAAGAAGACACCGTACCTGTTTCTGAAGTGCCTACAGTATCGAACAGTGAAGTGGTAGACGACACTTACCGTCCGATGGTGCTGCAATATCCGGACAAAACTGCAGAATATGTTCAATATAGGAGCTTTGTTTCGTAA
Protein Sequence: MFQLNKVQPLDTLMVCWECKALLNKCWKFREQVKDSYRILQTYTKENFYECLNSLGITPSLKVHYTETINIPAADPDDQSITSIAQVKIESVTWESVKDERSNPKEENNESSKELESELQHIISSIEKREEKRNRTTKSKTKKSKKILKSKEKHDHNDERTSAESLKLMNDKESYNILVESRIEAPEVDGEVNSFSEAWEFSKVETPSPRCDDEVSDTSVNETSNSANEWDIELKSRISPIEKCRRGNDNTKRAVNGKSKKIVKSIKPKTMKLQKDMKKILTVALTYEEMLLEREIESKKESFVKAEYKCNTCLLGFMQKKSYQMHLNSKHSSDLGEYICPICETIISSVDSFTAHYKRHMRRYECSICHKRTTDLKVMHQHYYSTHEISLKQYVCNVCGKVSSSIDTHRYHKDSHKARVQCPDCEKTFRHRAGLMNHRLVVHESQNAFPCNVCNKVFRWKTSLKRHLEKHDSKEESNPSAPRCFLCRINFASVCSYQRHLKNSRKHVTQDQLKYVCDHCDRRFCDKTKLRDHIEEKHLHTSYQCDICSKPYKNRVGLDQHIRNVHKGRPKNKMCHHCGRGFPTNMQLESHIRTHTGEKPFICEFCPTTFSQQSNLYKHYRQVHLIKSKPYPILKKKKEDTVPVSEVPTVSNSEVVDDTYRPMVLQYPDKTAEYVQYRSFVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -